MELO3C032292 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032292
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr03: 8644402 .. 8645904 (+)
RNA-Seq Expression	MELO3C032292
Synteny	MELO3C032292

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCCTACAAGTTCACTATAATTGACCTTTAGGTACATCGCAGTTAATTCATTGTGTTCCTTTCAACCTGCAGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTGAACGTCCCCGCAGGAGATCGGCCTACTTTCAGAACGCGTAAAGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATTCCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCAGAGAAACTGCCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTTAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATCGTTGCGGAGAAGGAATTATTCGATAATTGGGTTAGGGTATGGAATATAATTTAAACGTCACACAACGTTCACAATTTACATTTAGTAAACAATTTTTAAATTAGTACTCATACGTCATATTTTTTTTTCTGCCCGCAGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGCGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGATAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTTAGGCAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

mRNA sequence

ATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGCGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGATAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTTAGGCAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Coding sequence (CDS)

ATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTCGCTGGTCTTTCTTCAACTGAAATTGTCGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGTCGCATCCTGCAGCGAAAGGACTCCTGAACAAACCATTCCCGTATTACGACGAGCTTACATATGTATTTGGTCGCGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCAGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCCGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGATAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGGCGCTCGACCAAACAAACGAGCAACTTAGGCAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAAAGGGAGGGCTTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAG

Protein sequence

MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEDRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER

Homology

[Close]

BLAST of MELO3C032292 vs. NCBI nr
Match: TYJ97361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 405.2 bits (1040), Expect = 4.5e-109
Identity = 227/350 (64.86%), Postives = 244/350 (69.71%), Query Frame = 0


Query: 1   MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSR 60
           MDRRTFAI+CHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREF+RSGETVSR
Sbjct: 40  MDRRTFAIICHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFIRSGETVSR 99

Query: 61  HFNIVLLAVLRLYEELIKRPVP-------------------------------------- 120
           HFNIVLLAVLRLYEELIKRP+P                                      
Sbjct: 100 HFNIVLLAVLRLYEELIKRPIPVTSNYNDQRWKCFEVGIIEVHYISPWRVRRNVHKGQRP 159

Query: 121 -----------------------------------SHPAAKGLLNKPFPYY-DELTYVFG 180
                                               H +A+ ++ + F    D    + G
Sbjct: 160 RRRSAFIQNAGQRYHLQEWHGAANAPTNAKEYFNMKHSSARNVIERAFGVLKDRWAILRG 219

Query: 181 RDRATGRF-AETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRA 240
           +     +     F DVGSNEPGGGYDRFDMGDGNEDF PVYSQG+D+SQDDVRASRPSRA
Sbjct: 220 KSYYPCKSNVAPFVDVGSNEPGGGYDRFDMGDGNEDFLPVYSQGIDLSQDDVRASRPSRA 279

Query: 241 SEDRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRI 276
           SE RTG SG KRKR SQRDF++EAIHLALDQTNEQLRQIAEWPARNLANDNHVRT+ F I
Sbjct: 280 SEGRTGLSGLKRKRRSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTKIFPI 339

[Close]

BLAST of MELO3C032292 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 266/609 (43.68%), Postives = 271/609 (44.50%), Query Frame = 0


Query: 1   MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSR 60
           MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQ+EFVRSGETVSR
Sbjct: 15  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFVRSGETVSR 74

Query: 61  HFNIVLLAVLRLYEELIKRPVP-------------------------------------- 120
           HFNIVLLAVLRLYEELIKRPVP                                      
Sbjct: 75  HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 134

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 135 TRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPKGYYYLCDAG 194

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 195 YPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTIL 254

Query: 241 ------------------------------------------------------------ 276
                                                                       
Sbjct: 255 RGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETT 314

[Close]

BLAST of MELO3C032292 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 387.5 bits (994), Expect = 9.6e-104
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 74  EELIKRPVPSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 133
           +EL    V SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF
Sbjct: 55  KELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 114

Query: 134 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEDRTGSSGSKRKRGSQRDFELEAIHLA 193
           DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASE RTGSSGSKRKRGSQRDFELEAIHLA
Sbjct: 115 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLA 174

Query: 194 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 253
           LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG
Sbjct: 175 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 234

Query: 254 FVLMPEDEREGFCRVLLRDIER 276
           FVLMPEDEREGFCRVLLRDIER
Sbjct: 235 FVLMPEDEREGFCRVLLRDIER 256

[Close]

BLAST of MELO3C032292 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 387.5 bits (994), Expect = 9.6e-104
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 74  EELIKRPVPSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 133
           +EL    V SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF
Sbjct: 105 KELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 164

Query: 134 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEDRTGSSGSKRKRGSQRDFELEAIHLA 193
           DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASE RTGSSGSKRKRGSQRDFELEAIHLA
Sbjct: 165 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLA 224

Query: 194 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 253
           LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG
Sbjct: 225 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 284

Query: 254 FVLMPEDEREGFCRVLLRDIER 276
           FVLMPEDEREGFCRVLLRDIER
Sbjct: 285 FVLMPEDEREGFCRVLLRDIER 306

[Close]

BLAST of MELO3C032292 vs. NCBI nr
Match: TYK21395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 387.5 bits (994), Expect = 9.6e-104
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 74  EELIKRPVPSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 133
           +EL    V SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF
Sbjct: 105 KELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 164

Query: 134 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEDRTGSSGSKRKRGSQRDFELEAIHLA 193
           DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASE RTGSSGSKRKRGSQRDFELEAIHLA
Sbjct: 165 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLA 224

Query: 194 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 253
           LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG
Sbjct: 225 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 284

Query: 254 FVLMPEDEREGFCRVLLRDIER 276
           FVLMPEDEREGFCRVLLRDIER
Sbjct: 285 FVLMPEDEREGFCRVLLRDIER 306

[Close]

BLAST of MELO3C032292 vs. ExPASy TrEMBL
Match: A0A5D3BFG6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001710 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.2e-109
Identity = 227/350 (64.86%), Postives = 244/350 (69.71%), Query Frame = 0


Query: 1   MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSR 60
           MDRRTFAI+CHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREF+RSGETVSR
Sbjct: 40  MDRRTFAIICHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFIRSGETVSR 99

Query: 61  HFNIVLLAVLRLYEELIKRPVP-------------------------------------- 120
           HFNIVLLAVLRLYEELIKRP+P                                      
Sbjct: 100 HFNIVLLAVLRLYEELIKRPIPVTSNYNDQRWKCFEVGIIEVHYISPWRVRRNVHKGQRP 159

Query: 121 -----------------------------------SHPAAKGLLNKPFPYY-DELTYVFG 180
                                               H +A+ ++ + F    D    + G
Sbjct: 160 RRRSAFIQNAGQRYHLQEWHGAANAPTNAKEYFNMKHSSARNVIERAFGVLKDRWAILRG 219

Query: 181 RDRATGRF-AETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRA 240
           +     +     F DVGSNEPGGGYDRFDMGDGNEDF PVYSQG+D+SQDDVRASRPSRA
Sbjct: 220 KSYYPCKSNVAPFVDVGSNEPGGGYDRFDMGDGNEDFLPVYSQGIDLSQDDVRASRPSRA 279

Query: 241 SEDRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRI 276
           SE RTG SG KRKR SQRDF++EAIHLALDQTNEQLRQIAEWPARNLANDNHVRT+ F I
Sbjct: 280 SEGRTGLSGLKRKRRSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTKIFPI 339

[Close]

BLAST of MELO3C032292 vs. ExPASy TrEMBL
Match: E5GBB2 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 6.5e-106
Identity = 266/609 (43.68%), Postives = 271/609 (44.50%), Query Frame = 0


Query: 1   MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSR 60
           MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQ+EFVRSGETVSR
Sbjct: 15  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFVRSGETVSR 74

Query: 61  HFNIVLLAVLRLYEELIKRPVP-------------------------------------- 120
           HFNIVLLAVLRLYEELIKRPVP                                      
Sbjct: 75  HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 134

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 135 TRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPKGYYYLCDAG 194

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 195 YPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTIL 254

Query: 241 ------------------------------------------------------------ 276
                                                                       
Sbjct: 255 RGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETT 314

[Close]

BLAST of MELO3C032292 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.7e-104
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 74  EELIKRPVPSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 133
           +EL    V SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF
Sbjct: 105 KELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 164

Query: 134 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEDRTGSSGSKRKRGSQRDFELEAIHLA 193
           DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASE RTGSSGSKRKRGSQRDFELEAIHLA
Sbjct: 165 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLA 224

Query: 194 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 253
           LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG
Sbjct: 225 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 284

Query: 254 FVLMPEDEREGFCRVLLRDIER 276
           FVLMPEDEREGFCRVLLRDIER
Sbjct: 285 FVLMPEDEREGFCRVLLRDIER 306

[Close]

BLAST of MELO3C032292 vs. ExPASy TrEMBL
Match: A0A5D3CHA0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00970 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.7e-104
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 74  EELIKRPVPSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 133
           +EL    V SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF
Sbjct: 55  KELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 114

Query: 134 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEDRTGSSGSKRKRGSQRDFELEAIHLA 193
           DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASE RTGSSGSKRKRGSQRDFELEAIHLA
Sbjct: 115 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLA 174

Query: 194 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 253
           LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG
Sbjct: 175 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 234

Query: 254 FVLMPEDEREGFCRVLLRDIER 276
           FVLMPEDEREGFCRVLLRDIER
Sbjct: 235 FVLMPEDEREGFCRVLLRDIER 256

[Close]

BLAST of MELO3C032292 vs. ExPASy TrEMBL
Match: A0A5A7SRU1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00100 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.7e-104
Identity = 195/202 (96.53%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 74  EELIKRPVPSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 133
           +EL    V SHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF
Sbjct: 105 KELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRF 164

Query: 134 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEDRTGSSGSKRKRGSQRDFELEAIHLA 193
           DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASE RTGSSGSKRKRGSQRDFELEAIHLA
Sbjct: 165 DMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLA 224

Query: 194 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 253
           LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG
Sbjct: 225 LDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRG 284

Query: 254 FVLMPEDEREGFCRVLLRDIER 276
           FVLMPEDEREGFCRVLLRDIER
Sbjct: 285 FVLMPEDEREGFCRVLLRDIER 306

[Close]

BLAST of MELO3C032292 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-10
Identity = 30/78 (38.46%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 1   MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSR 60
           MD+  F  LC LL+    L  T  + +E  +A+FL ++ H+++ R +Q  F  SGET+SR
Sbjct: 48  MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISR 107

Query: 61  HFNIVLLAVLRLYEELIK 79
           HFN VL AV+ + ++  +
Sbjct: 108 HFNNVLNAVIAISKDFFQ 125

[Close]

BLAST of MELO3C032292 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 3.7e-05
Identity = 35/107 (32.71%), Postives = 50/107 (46.73%), Query Frame = 0


Query: 1   MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVRSGETVSR 60
           M    F  LC +L    GL S+  + ++E VA+FL + A +   R I   F  + ET+ R
Sbjct: 30  MSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQETIWR 89

Query: 61  HFNIVLLAVLRLYEELIK-RPVPSHPAAKGLLNKPFPYYDELTYVFG 107
            F+ VL A+ RL  E I+ R V    A    L     Y+  L  + G
Sbjct: 90  KFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLG 136

The following BLAST results are available for this feature:

BLAST of MELO3C032292 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97361.1	4.5e-109	64.86	retrotransposon protein [Cucumis melo var. makuwa]	[more]
ADN33754.1	1.3e-105	43.68	retrotransposon protein [Cucumis melo subsp. melo]	[more]
TYK10915.1	9.6e-104	96.53	retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon p...	[more]
KAA0032766.1	9.6e-104	96.53	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK21395.1	9.6e-104	96.53	retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon p...	[more]

BLAST of MELO3C032292 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032292 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFG6	2.2e-109	64.86	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GBB2	6.5e-106	43.68	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5D3DCZ1	4.7e-104	96.53	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CHA0	4.7e-104	96.53	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SRU1	4.7e-104	96.53	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C032292 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	6.6e-10	38.46	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28730.1	3.7e-05	32.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..182
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 1..83
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032292.1	MELO3C032292.1	mRNA