Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACCATAGAGTACAATTCCTTGCTTTGTTTGCTTTGTTGGGTTTGGGGTTAGCTTCGGCCGCCAGAACTCTTATTGCTTATGATGGCGATGTCCGCGTTCCTGTGTTAGGGCATACTTCTGTTGGATATGGTGGTGGAGAAGGAGGTGGTAGTGGATATGGACTTAGCCTTGGATATGGCGGTGGTGGCGGAGGAGGACATGGAGGTGGAGGTGGTTCTACAAATGGTGGTGGATATGGAAATGGTGGAGGTGAAGGAAGTGGCTCCGGATATGGAGGTGGAGAAGAACGTGGTTATGGAAATGGTGGTGGTGGAGGAGGAGGAGGAGGAAGTGGTGGTGGTGGTGGAAGCGGGGTCGGATATGGCCCGGTCGGTGGTTACGGAAGTGGAGAAGGAGGTGGTTCTGGTGGTGGTTATGGTAGCGGGGGATCGGGTTATGGAGGTGGTGGCGGTGGTGGAAATGGAGGTGGTGGTGGTTATGGTGCAGGAGCAGCGAGTGGAGGAGGATATGGAAGCGGTGGAGGACAAGGAGGAGGCTCAGGGAGCGGAGGTGGAGGGCATGGAGGCGGCGGAGGAGGTGGTTGGGGAGGTGGGTATGGTAGTGGAGGAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGAGGCTCAGGGAGTGGAGCAGGAGGACATGGAGGT
mRNA sequence
ATGGAGAACCATAGAGTACAATTCCTTGCTTTGTTTGCTTTGTTGGGTTTGGGGTTAGCTTCGGCCGCCAGAACTCTTATTGCTTATGATGGCGATGTCCGCGTTCCTGTGTTAGGGCATACTTCTGTTGGATATGGTGGTGGAGAAGGAGGTGGTAGTGGATATGGACTTAGCCTTGGATATGGCGGTGGTGGCGGAGGAGGACATGGAGGTGGAGGTGGTTCTACAAATGGTGGTGGATATGGAAATGGTGGAGGTGAAGGAAGTGGCTCCGGATATGGAGGTGGTGGCGGTGGTGGAAATGGAGGTGGTGGTGGTTATGGTGCAGGAGCAGCGAGTGGAGGAGGATATGGAAGCGGTGGAGGACAAGGAGGAGGCTCAGGGAGCGGAGGTGGAGGGCATGGAGGCGGCGGAGGAGGTGGTTGGGGAGGTGGGTATGGTAGTGGAGGAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGAGGCTCAGGGAGTGGAGCAGGAGGACATGGAGGT
Coding sequence (CDS)
ATGGAGAACCATAGAGTACAATTCCTTGCTTTGTTTGCTTTGTTGGGTTTGGGGTTAGCTTCGGCCGCCAGAACTCTTATTGCTTATGATGGCGATGTCCGCGTTCCTGTGTTAGGGCATACTTCTGTTGGATATGGTGGTGGAGAAGGAGGTGGTAGTGGATATGGACTTAGCCTTGGATATGGCGGTGGTGGCGGAGGAGGACATGGAGGTGGAGGTGGTTCTACAAATGGTGGTGGATATGGAAATGGTGGAGGTGAAGGAAGTGGCTCCGGATATGGAGGTGGTGGCGGTGGTGGAAATGGAGGTGGTGGTGGTTATGGTGCAGGAGCAGCGAGTGGAGGAGGATATGGAAGCGGTGGAGGACAAGGAGGAGGCTCAGGGAGCGGAGGTGGAGGGCATGGAGGCGGCGGAGGAGGTGGTTGGGGAGGTGGGTATGGTAGTGGAGGAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGAGGCTCAGGGAGTGGAGCAGGAGGACATGGAGGT
Protein sequence
MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLGYGGGGGGGHGGGGGSTNGGGYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGSGGGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGG
Homology
BLAST of MELO3C032259 vs. NCBI nr
Match:
XP_016900590.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo])
HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG
Sbjct: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
Query: 61 YGGGGGGGHGGGGGSTNGGGYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGSG 120
YGGGGGGGHGGGGGSTNGGGYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGSG
Sbjct: 61 YGGGGGGGHGGGGGSTNGGGYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGSG 120
Query: 121 GGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGG 175
GGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGG
Sbjct: 121 GGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGG 174
BLAST of MELO3C032259 vs. NCBI nr
Match:
XP_011652713.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN55754.1 hypothetical protein Csa_011047 [Cucumis sativus])
HSP 1 Score: 159.1 bits (401), Expect = 3.5e-35
Identity = 166/235 (70.64%), Postives = 169/235 (71.91%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENHRVQFLALFALLGLGLASAARTLIAYDGDV PVLGHTSVGYGGGEG GSGYG+S+G
Sbjct: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
Query: 61 YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGY-------------------------- 120
YGGGGGGG GGGGGSTNGG GYGNGGGEGSG+GY
Sbjct: 61 YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
Query: 121 ---------------------------------GGGGGGGNGGG-GGYGAGAASGGGYGS 175
GGGGGGGNGGG GGYGAG ASGGGYGS
Sbjct: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
BLAST of MELO3C032259 vs. NCBI nr
Match:
XP_038903688.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 132.9 bits (333), Expect = 2.7e-27
Identity = 151/230 (65.65%), Postives = 161/230 (70.00%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENHRVQ+LA FA LGLGLASAARTLIAYDG+V PVLGH S+GYGGGEG G GYG+++G
Sbjct: 1 MENHRVQYLAFFAFLGLGLASAARTLIAYDGNVHAPVLGHVSIGYGGGEGAGGGYGVTVG 60
Query: 61 YGGGGGGGHGGGGGSTNGG-GYGNGGGEGS------------------------------ 120
YGGGGGGG GGGGGST+GG GYG+GGGEGS
Sbjct: 61 YGGGGGGGRGGGGGSTDGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGVG 120
Query: 121 ------------------------GSGYGGGGGGGNGGGGGYGAGAASGGGYGSGGGQGG 175
GSGYGGGGGGGNGGGGGYGAG A+GGGYGSGGGQGG
Sbjct: 121 VGYGPGGGYGNGGGAGSGGGYGNGGSGYGGGGGGGNGGGGGYGAGGANGGGYGSGGGQGG 180
BLAST of MELO3C032259 vs. NCBI nr
Match:
KAG6577707.1 (hypothetical protein SDJN03_25281, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 124.8 bits (312), Expect = 7.4e-25
Identity = 148/227 (65.20%), Postives = 158/227 (69.60%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENH +Q+L FALLG GLASAARTL+AYD +V+VPVLG SVGYGGGEGGGSGYG++ G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60
Query: 61 YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGS---------------------------- 120
Y GGGGGG GGGGGS GG GYGNGGGEGSG+
Sbjct: 61 YAGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGGY 120
Query: 121 -----------------------GYGGGGGGGNGGGGGYGAGAASGGGYGSGGGQGGGSG 175
GYGGGGGGG+GGGGGYGAG A+GGGYGSGGGQGGGSG
Sbjct: 121 GPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSG 180
BLAST of MELO3C032259 vs. NCBI nr
Match:
XP_023552301.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 113.6 bits (283), Expect = 1.7e-21
Identity = 144/227 (63.44%), Postives = 154/227 (67.84%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENH +Q+L FALLG GLASAARTL+AYDG+V+VPVLG SV G GGGSGYG++ G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDGNVQVPVLGRVSV----GSGGGSGYGVTAG 60
Query: 61 YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGS---------------------------- 120
Y GGGGGG GGGGGS GG GYGNGGGEGSG+
Sbjct: 61 YAGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGGY 120
Query: 121 -----------------------GYGGGGGGGNGGGGGYGAGAASGGGYGSGGGQGGGSG 175
GYGGGGGGG+GGGGGYGAG A+GGGYGSGGGQGGGSG
Sbjct: 121 GPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSG 180
BLAST of MELO3C032259 vs. ExPASy TrEMBL
Match:
A0A1S4DY03 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103490777 PE=4 SV=1)
HSP 1 Score: 209.5 bits (532), Expect = 1.1e-50
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG
Sbjct: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
Query: 61 YGGGGGGGHGGGGGSTNGGGYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGSG 120
YGGGGGGGHGGGGGSTNGGGYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGSG
Sbjct: 61 YGGGGGGGHGGGGGSTNGGGYGNGGGEGSGSGYGGGGGGGNGGGGGYGAGAASGGGYGSG 120
Query: 121 GGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGG 175
GGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGG
Sbjct: 121 GGQGGGSGSGGGGHGGGGGGGWGGGYGSGGNGGGYGSGGGEGGGSGSGAGGHGG 174
BLAST of MELO3C032259 vs. ExPASy TrEMBL
Match:
A0A0A0L3Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 1.7e-35
Identity = 166/235 (70.64%), Postives = 169/235 (71.91%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENHRVQFLALFALLGLGLASAARTLIAYDGDV PVLGHTSVGYGGGEG GSGYG+S+G
Sbjct: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVHAPVLGHTSVGYGGGEGAGSGYGVSVG 60
Query: 61 YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGY-------------------------- 120
YGGGGGGG GGGGGSTNGG GYGNGGGEGSG+GY
Sbjct: 61 YGGGGGGGRGGGGGSTNGGVGYGNGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGGG 120
Query: 121 ---------------------------------GGGGGGGNGGG-GGYGAGAASGGGYGS 175
GGGGGGGNGGG GGYGAG ASGGGYGS
Sbjct: 121 SGVRYGPVGGYGSGEGGGSGGGYGGGGSGYGGGGGGGGGGNGGGSGGYGAGEASGGGYGS 180
BLAST of MELO3C032259 vs. ExPASy TrEMBL
Match:
A0A6J1E5Z3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 5.3e-21
Identity = 141/189 (74.60%), Postives = 152/189 (80.42%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENH +Q+L FALLG GLASAARTL+AYD +V+VPVLG SVGYGGGEGGGSGYG++ G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60
Query: 61 Y-GGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGYGG--------GGGGGNGGGGGYGAG 120
Y GGGGGGG GGGGGS GG GYGNGGGEGSG+GYGG GGGGG G GGG G G
Sbjct: 61 YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120
Query: 121 AASGGGYGSGG--GQGGGSGSGGGGHGGGGGG--GWGGGYGSGG-NGGGYGSGGGEGGGS 175
GGGYGSGG G GGG GSGG G+GGGGGG G GGGYG+GG NGGGYGSGGG+GGGS
Sbjct: 121 YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGS 180
BLAST of MELO3C032259 vs. ExPASy TrEMBL
Match:
A0A6J1L823 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111500160 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 1.0e-19
Identity = 136/194 (70.10%), Postives = 150/194 (77.32%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENH +++L FALLG GLASAARTL+AYD +V+VPVLG S+GYGGGEGGGSGYG++ G
Sbjct: 13 MENHAIEYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSIGYGGGEGGGSGYGVTAG 72
Query: 61 YGGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGYGG--------GGGGGNGGGGGYGAGA 120
Y GGGGGG GGGGGS GG GYGNGGGEGSG+GYGG GGGGG G GGG G G
Sbjct: 73 YAGGGGGGRGGGGGSAYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGGY 132
Query: 121 ASGGGYGSGG--GQGGGSGSGGGGHGGGGGG--GWGGGYGSG-------GNGGGYGSGGG 175
GGGYGSGG G GGG GSGG G+GGGGGG G GGGYG+G G+GGGYGSGGG
Sbjct: 133 GPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYGSGGG 192
BLAST of MELO3C032259 vs. ExPASy TrEMBL
Match:
A0A6J1E9J4 (glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431102 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 2.9e-19
Identity = 140/195 (71.79%), Postives = 151/195 (77.44%), Query Frame = 0
Query: 1 MENHRVQFLALFALLGLGLASAARTLIAYDGDVRVPVLGHTSVGYGGGEGGGSGYGLSLG 60
MENH +Q+L FALLG GLASAARTL+AYD +V+VPVLG SVGYGGGEGGGSGYG++ G
Sbjct: 1 MENHAMQYLVFFALLGFGLASAARTLVAYDANVQVPVLGRVSVGYGGGEGGGSGYGVTTG 60
Query: 61 Y-GGGGGGGHGGGGGSTNGG-GYGNGGGEGSGSGYGG--------GGGGGNGGGGGYGAG 120
Y GGGGGGG GGGGGS GG GYGNGGGEGSG+GYGG GGGGG G GGG G G
Sbjct: 61 YAGGGGGGGRGGGGGSGYGGVGYGNGGGEGSGAGYGGGEDRGYGNGGGGGGGSGGGSGGG 120
Query: 121 AASGGGYGSGG--GQGGGSGSGGGGHGGGGGG--GWGGGYGSG-------GNGGGYGSGG 175
GGGYGSGG G GGG GSGG G+GGGGGG G GGGYG+G G+GGGYGSGG
Sbjct: 121 YGPGGGYGSGGGAGSGGGYGSGGVGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGYGSGG 180
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_016900590.1 | 2.3e-50 | 100.00 | PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] | [more] |
| XP_011652713.1 | 3.5e-35 | 70.64 | glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN55754.1 hypoth... | [more] |
| XP_038903688.1 | 2.7e-27 | 65.65 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
| KAG6577707.1 | 7.4e-25 | 65.20 | hypothetical protein SDJN03_25281, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023552301.1 | 1.7e-21 | 63.44 | glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4DY03 | 1.1e-50 | 100.00 | glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
| A0A0A0L3Y5 | 1.7e-35 | 70.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011080 PE=4 SV=1 | [more] |
| A0A6J1E5Z3 | 5.3e-21 | 74.60 | glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Cucurbita mosch... | [more] |
| A0A6J1L823 | 1.0e-19 | 70.10 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G... | [more] |
| A0A6J1E9J4 | 2.9e-19 | 71.79 | glycine-rich cell wall structural protein 1.8-like isoform X2 OS=Cucurbita mosch... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
