MELO3C032222 (gene) Melon (DHL92) v4

Overview
NameMELO3C032222
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGDSL esterase/lipase At1g71691-like
Locationchr06: 27831122 .. 27831564 (-)
RNA-Seq ExpressionMELO3C032222
SyntenyMELO3C032222
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATCGAGTTCGACATTGTGATGAGATATATCATCGAAAAGCTTGACATGGAGATGTTCGATTCAAGTATAATCTTCTCTAATTTGCTTCTTGATTTTATCTTGAAGAACCATAAACATTATGTTGAATGAGAATCTAACTTTTTCTTTTACTATCTTCACCATGAACCAAATTTGTCTCTCTCATTGCGCTAGTCTGTTTTTTCCCATTTAGGTTTCAATGCAACTCCAAATGCTTGTGGGTTCGGTCATTACATTGGTTGGATCATGTGCATCTCACCAATTTTGGTTTGTAAAAATACTTCTAATCATATTTGGTGGGATTAATTTCTTCCAATAGATGAAGTAAATGTTATTCTTGCAGATAATGTGTGGAATGACATCCACACAACAATGTGTTATCCAAAGAATTTGCAAAACGTGATAAACTTCCATGGCTA

mRNA sequence

ATGATTATCGAGTTCGACATTGTGATGAGATATATCATCGAAAAGCTTGACATGGAGATGTTCGATTCAAGTTTCAATGCAACTCCAAATGCTTGTGGGTTCGGTCATTACATTGGTTGGATCATGTGCATCTCACCAATTTTGATAATGTGTGGAATGACATCCACACAACAATGTGTTATCCAAAGAATTTGCAAAACGTGATAAACTTCCATGGCTA

Coding sequence (CDS)

ATGATTATCGAGTTCGACATTGTGATGAGATATATCATCGAAAAGCTTGACATGGAGATGTTCGATTCAAGTTTCAATGCAACTCCAAATGCTTGTGGGTTCGGTCATTACATTGGTTGGATCATGTGCATCTCACCAATTTTGATAATGTGTGGAATGACATCCACACAACAATGTGTTATCCAAAGAATTTGCAAAACGTGA

Protein sequence

MIIEFDIVMRYIIEKLDMEMFDSSFNATPNACGFGHYIGWIMCISPILIMCGMTSTQQCVIQRICKT
Homology
BLAST of MELO3C032222 vs. NCBI nr
Match: XP_008452220.1 (PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL esterase/lipase [Cucumis melo var. makuwa] >TYK00787.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05
Identity = 32/70 (45.71%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DSS                     FN T NA CGFG Y 
Sbjct: 286 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHEYYGFNVTSNACCGFGRYN 345

BLAST of MELO3C032222 vs. NCBI nr
Match: XP_004145656.2 (GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protein Csa_010616 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 5.6e-05
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DS+                     FN T NA CGFG Y 
Sbjct: 284 MVMEFNFAMRYVVEELGMELPDSNIIFCDLLQGSMDILKNHEYYGFNVTSNACCGFGRYN 343

BLAST of MELO3C032222 vs. NCBI nr
Match: XP_038904573.1 (GDSL esterase/lipase At1g71691 [Benincasa hispida])

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-04
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DSS                     FN T +A CGFG Y 
Sbjct: 281 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLQGSMDILKNHERYGFNVTSDACCGFGRYN 340

BLAST of MELO3C032222 vs. NCBI nr
Match: XP_022136745.1 (GDSL esterase/lipase At1g71691 [Momordica charantia])

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-04
Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DSS                     FN T +A CGFG Y 
Sbjct: 280 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHERYGFNVTTDACCGFGRYN 339

BLAST of MELO3C032222 vs. NCBI nr
Match: KAF2313461.1 (hypothetical protein GH714_011112 [Hevea brasiliensis])

HSP 1 Score: 54.7 bits (130), Expect = 3.6e-04
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS------FNATPNACGFGHYIGWIMCISP 47
           MI+E++  MRY+IE+L  E+ D+       FN T +ACG G Y GWIMCI P
Sbjct: 284 MIMEYNFFMRYMIEELGQELPDAKLTSVTCFNVTTDACGLGKYKGWIMCIGP 335

BLAST of MELO3C032222 vs. ExPASy TrEMBL
Match: A0A5A7UZU1 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00560 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.1e-05
Identity = 32/70 (45.71%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DSS                     FN T NA CGFG Y 
Sbjct: 286 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHEYYGFNVTSNACCGFGRYN 345

BLAST of MELO3C032222 vs. ExPASy TrEMBL
Match: A0A1S3BSQ9 (GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.1e-05
Identity = 32/70 (45.71%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DSS                     FN T NA CGFG Y 
Sbjct: 286 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHEYYGFNVTSNACCGFGRYN 345

BLAST of MELO3C032222 vs. ExPASy TrEMBL
Match: A0A0A0L7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-05
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DS+                     FN T NA CGFG Y 
Sbjct: 284 MVMEFNFAMRYVVEELGMELPDSNIIFCDLLQGSMDILKNHEYYGFNVTSNACCGFGRYN 343

BLAST of MELO3C032222 vs. ExPASy TrEMBL
Match: A0A6J1C4U4 (GDSL esterase/lipase At1g71691 OS=Momordica charantia OX=3673 GN=LOC111008376 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS---------------------FNATPNA-CGFGHYI 49
           M++EF+  MRY++E+L ME+ DSS                     FN T +A CGFG Y 
Sbjct: 280 MVMEFNFAMRYMVEELGMELPDSSIIFCDLLEGSMDILKNHERYGFNVTTDACCGFGRYN 339

BLAST of MELO3C032222 vs. ExPASy TrEMBL
Match: A0A6A6MI52 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_011112 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-04
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEMFDSS------FNATPNACGFGHYIGWIMCISP 47
           MI+E++  MRY+IE+L  E+ D+       FN T +ACG G Y GWIMCI P
Sbjct: 284 MIMEYNFFMRYMIEELGQELPDAKLTSVTCFNVTTDACGLGKYKGWIMCIGP 335

BLAST of MELO3C032222 vs. TAIR 10
Match: AT4G10950.1 (SGNH hydrolase-type esterase superfamily protein )

HSP 1 Score: 40.8 bits (94), Expect = 5.0e-04
Identity = 26/68 (38.24%), Postives = 35/68 (51.47%), Query Frame = 0

Query: 1   MIIEFDIVMRYIIEKLDMEM----------FDSS-----------FNATPNA-CGFGHYI 47
           MI+E + VMRY ++KL+ E+          F S+           FN T +A CG G Y 
Sbjct: 283 MIMESNFVMRYTVDKLNRELPGASIIYCDVFQSAMDILRNHQHYGFNETTDACCGLGRYK 342

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008452220.14.3e-0545.71PREDICTED: GDSL esterase/lipase At1g71691-like [Cucumis melo] >KAA0060544.1 GDSL... [more]
XP_004145656.25.6e-0544.29GDSL esterase/lipase At1g71691 [Cucumis sativus] >KGN57733.1 hypothetical protei... [more]
XP_038904573.11.6e-0444.29GDSL esterase/lipase At1g71691 [Benincasa hispida][more]
XP_022136745.12.1e-0442.86GDSL esterase/lipase At1g71691 [Momordica charantia][more]
KAF2313461.13.6e-0450.00hypothetical protein GH714_011112 [Hevea brasiliensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UZU12.1e-0545.71GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420... [more]
A0A1S3BSQ92.1e-0545.71GDSL esterase/lipase At1g71691-like OS=Cucumis melo OX=3656 GN=LOC103493303 PE=3... [more]
A0A0A0L7F02.7e-0544.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270280 PE=3 SV=1[more]
A0A6J1C4U41.0e-0442.86GDSL esterase/lipase At1g71691 OS=Momordica charantia OX=3673 GN=LOC111008376 PE... [more]
A0A6A6MI521.7e-0450.00Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_011112 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G10950.15.0e-0438.24SGNH hydrolase-type esterase superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032222.1MELO3C032222.1mRNA