MELO3C032207 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032207
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr06: 26713219 .. 26714026 (-)
RNA-Seq Expression	MELO3C032207
Synteny	MELO3C032207

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGGCCAACGTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAGGCAGAGAAACTCGTGTTCGATGACTGGGTTAAGGTAAGAAGATGAATATAATTTATACTTTTTATAAAAGTAAAATATAATATACTTACATATGTTAACTCCATGTAGGGACACCCCAATGCTCAAAGCCTACTAAATAAACCATTTCCTTACTTCTATGATTTGGAAATTTTGTTTGGTAGAAATAGGGCTACTGGTGGTAGATGTAAGACACCCGTTGAAATGGGCTCACAGATTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAAACTTTGATATTCTAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCTATCCACTCCAACAAGTATGGCACATGATGCGAGATCATGTAGACCAAGTAAGAAAAGACGGTTATATTCAGGGGACCTTATGGACACATTTTGTGCAAGTATGTGAGAAACTTCCAAGGAAATTGGAAAGATTGCTACATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAATGATTATATGCTGAATTACAAGACTATTCCTGGAATGGACGTGGATGATTGTTTAATTGTAGCCGAGTCTCTATTACTTGATCCCACGATGTTGCATGCATTCCTTGACTACCTAGCAGAATGGAAGTATAGGAAATGCATGCATATCTTAGGAAGACAATCATAACTATAACTAAAGTAACTTTACTTGATTTTCACTTTTGTTTGATCTTTTGGTTATGCTTACTTTTGAAAC

mRNA sequence

ATGATGGGGCCAACGTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAGGCAGAGAAACTCGTGTTCGATGACTGGGTTAAGGGACACCCCAATGCTCAAAGCCTACTAAATAAACCATTTCCTTACTTCTATGATTTGGAAATTTTGTTTGGTAGAAATAGGGCTACTGGTGGTAGATGTAAGACACCCGTTGAAATGGGCTCACAGATTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAAACTTTGATATTCTAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCTATCCACTCCAACAAGTATGGCACATGATGCGAGATCATGTAGACCAAGTAAGAAAAGACGGTTATATTCAGGGGACCTTATGGACACATTTTGTGCAAGTATGTGAGAAACTTCCAAGGAAATTGGAAAGATTGCTACATGGCAGAGAGAAAAAATGGAAATAGAATCATCCCTACACAAATGATTATATGCTGAATTACAAGACTATTCCTGGAATGGACGTGGATGATTGTTTAATTGTAGCCGAGTCTCTATTACTTGATCCCACGATGTTGCATGCATTCCTTGACTACCTAGCAGAATGGAAGTATAGGAAATGCATGCATATCTTAGGAAGACAATCATAACTATAACTAAAGTAACTTTACTTGATTTTCACTTTTGTTTGATCTTTTGGTTATGCTTACTTTTGAAAC

Coding sequence (CDS)

ATGATGGGGCCAACGTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCATTAAGGCAGAGAAACTCGTGTTCGATGACTGGGTTAAGGGACACCCCAATGCTCAAAGCCTACTAAATAAACCATTTCCTTACTTCTATGATTTGGAAATTTTGTTTGGTAGAAATAGGGCTACTGGTGGTAGATGTAAGACACCCGTTGAAATGGGCTCACAGATTGCAAGAGATACTGAGGAAGATGACATGGACATTAATCTTGAAAACTTTGATATTCTAAATCCACATGGACTCGAGCCACCTTCGGGGGAGGACATGCTATCCACTCCAACAAGTATGGCACATGATGCGAGATCATGTAGACCAAGTAAGAAAAGACGGTTATATTCAGGGGACCTTATGGACACATTTTGTGCAAGTATGTGA

Protein sequence

MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATGGRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCRPSKKRRLYSGDLMDTFCASM

Homology

[Close]

BLAST of MELO3C032207 vs. NCBI nr
Match: KAA0060670.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK23802.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 4.3e-76
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MM PTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQ LLNKPFPYFYDLEILFGR+RATG
Sbjct: 115 MMRPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATG 174

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARS R
Sbjct: 175 GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSSR 234

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRRLYSGDLMDTFCASM
Sbjct: 235 PSKKRRLYSGDLMDTFCASM 254

[Close]

BLAST of MELO3C032207 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 4.1e-66
Identity = 120/140 (85.71%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGP CSGFGWNE +KCI+ EK VFDDWVKGHPNAQ LLNKPFPYFYDLE++FGR+RATG
Sbjct: 192 MMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATG 251

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEM SQ ARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPTSM HDA S R
Sbjct: 252 GRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSR 311

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRR YSGDLMDTF ASM
Sbjct: 312 PSKKRRSYSGDLMDTFRASM 331

[Close]

BLAST of MELO3C032207 vs. NCBI nr
Match: TYK10886.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65
Identity = 118/140 (84.29%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+ LLNK FPYFYDL+I+FGR+RATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEMG QIARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPTSMA+D  S R
Sbjct: 61  GRCKTPVEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSR 120

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRR YS DLMDTFCASM
Sbjct: 121 PSKKRRSYSEDLMDTFCASM 140

[Close]

BLAST of MELO3C032207 vs. NCBI nr
Match: KAA0067273.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 6.5e-64
Identity = 116/140 (82.86%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+ LLNK FPYFYDL+I+FGR+RATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTP+EMG QIARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPTSMAHD  S +
Sbjct: 61  GRCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSK 120

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRR YS DLMDTF ASM
Sbjct: 121 PSKKRRSYSEDLMDTFRASM 140

[Close]

BLAST of MELO3C032207 vs. NCBI nr
Match: TYK27106.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63
Identity = 117/140 (83.57%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGPTCSGFGWNEERKCI+AEK VF+DWVKGH N Q LLNKPFPYFYDL+I+FGR+ ATG
Sbjct: 1   MMGPTCSGFGWNEERKCIEAEKSVFNDWVKGHLNDQGLLNKPFPYFYDLKIVFGRDIATG 60

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEMGS  ARD EEDDMDINLE+FDI NPHGL+PPSGEDM STPTSMAHD  S R
Sbjct: 61  GRCKTPVEMGSHTARDIEEDDMDINLEDFDIPNPHGLKPPSGEDMSSTPTSMAHDVGSSR 120

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKR  YSGDLM TFCASM
Sbjct: 121 PSKKRWSYSGDLMHTFCASM 140

[Close]

BLAST of MELO3C032207 vs. ExPASy TrEMBL
Match: A0A5D3DJR9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold580G00150 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MM PTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQ LLNKPFPYFYDLEILFGR+RATG
Sbjct: 115 MMRPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQGLLNKPFPYFYDLEILFGRDRATG 174

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARS R
Sbjct: 175 GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSSR 234

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRRLYSGDLMDTFCASM
Sbjct: 235 PSKKRRLYSGDLMDTFCASM 254

[Close]

BLAST of MELO3C032207 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.0e-66
Identity = 120/140 (85.71%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGP CSGFGWNE +KCI+ EK VFDDWVKGHPNAQ LLNKPFPYFYDLE++FGR+RATG
Sbjct: 192 MMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATG 251

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEM SQ ARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPTSM HDA S R
Sbjct: 252 GRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSR 311

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRR YSGDLMDTF ASM
Sbjct: 312 PSKKRRSYSGDLMDTFRASM 331

[Close]

BLAST of MELO3C032207 vs. ExPASy TrEMBL
Match: A0A5D3CKC1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00580 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 118/140 (84.29%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+ LLNK FPYFYDL+I+FGR+RATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEMG QIARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPTSMA+D  S R
Sbjct: 61  GRCKTPVEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSR 120

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRR YS DLMDTFCASM
Sbjct: 121 PSKKRRSYSEDLMDTFCASM 140

[Close]

BLAST of MELO3C032207 vs. ExPASy TrEMBL
Match: A0A5A7VGQ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00930 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.1e-64
Identity = 116/140 (82.86%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGP CS FGWNEE+KCI+A+K VFDDWVKGHPNA+ LLNK FPYFYDL+I+FGR+RATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTP+EMG QIARDTEEDDMDINLE+FDI NPHGLEPPSGEDM STPTSMAHD  S +
Sbjct: 61  GRCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSK 120

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKRR YS DLMDTF ASM
Sbjct: 121 PSKKRRSYSEDLMDTFRASM 140

[Close]

BLAST of MELO3C032207 vs. ExPASy TrEMBL
Match: A0A5D3DTS8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2527G00030 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.0e-64
Identity = 117/140 (83.57%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MMGPTCSGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 60
           MMGPTCSGFGWNEERKCI+AEK VF+DWVKGH N Q LLNKPFPYFYDL+I+FGR+ ATG
Sbjct: 1   MMGPTCSGFGWNEERKCIEAEKSVFNDWVKGHLNDQGLLNKPFPYFYDLKIVFGRDIATG 60

Query: 61  GRCKTPVEMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCR 120
           GRCKTPVEMGS  ARD EEDDMDINLE+FDI NPHGL+PPSGEDM STPTSMAHD  S R
Sbjct: 61  GRCKTPVEMGSHTARDIEEDDMDINLEDFDIPNPHGLKPPSGEDMSSTPTSMAHDVGSSR 120

Query: 121 PSKKRRLYSGDLMDTFCASM 141
           PSKKR  YSGDLM TFCASM
Sbjct: 121 PSKKRWSYSGDLMHTFCASM 140

[Close]

BLAST of MELO3C032207 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 33/123 (26.83%), Postives = 55/123 (44.72%), Query Frame = 0


Query: 8   GFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATGGRCKTPV 67
           GF W+ ER+ + A+  V+ D++K H +A+  + +P PY+ DL +L G +      C   +
Sbjct: 259 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCGDSGIEENECFVAM 318

Query: 68  -----EMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCRPS 126
                E   Q  + +   D+ I+ E  D  N    +P +  D L+       D     P 
Sbjct: 319 DWFDPETEFQEFKSSGTTDLSISAEEED-SNSLLFDPKNKRDQLANT-----DTSPINPK 375

[Close]

BLAST of MELO3C032207 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 33/123 (26.83%), Postives = 55/123 (44.72%), Query Frame = 0


Query: 8   GFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATGGRCKTPV 67
           GF W+ ER+ + A+  V+ D++K H +A+  + +P PY+ DL +L G +      C   +
Sbjct: 259 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCGDSGIEENECFVAM 318

Query: 68  -----EMGSQIARDTEEDDMDINLENFDILNPHGLEPPSGEDMLSTPTSMAHDARSCRPS 126
                E   Q  + +   D+ I+ E  D  N    +P +  D L+       D     P 
Sbjct: 319 DWFDPETEFQEFKSSGTTDLSISAEEED-SNSLLFDPKNKRDQLANT-----DTSPINPK 375

[Close]

BLAST of MELO3C032207 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07
Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 7   SGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG 61
           SGFGW+ E K   A   V+ D++K HPN + +  +   +F DL+I+FG   ATG
Sbjct: 88  SGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDHFEDLQIIFGDVVATG 141

[Close]

BLAST of MELO3C032207 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07
Identity = 32/96 (33.33%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 7   SGFGWNEERKCIKAEKLVFDDWVKGHPNAQSLLNKPFPYFYDLEILFGRNRATG----GR 66
           SGFGW+   K   A   V+ D++K HPN + L    F +F +L+I+FG   ATG    G 
Sbjct: 92  SGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFDELQIIFGEGVATGKNAIGL 151

Query: 67  CKTP---VEMGSQIARDTEEDDMDINLENFDILNPH 96
           C +         +  R    DD D N+  +D    H
Sbjct: 152 CDSTDGLTYRAGENPRKEYVDDFD-NVYEYDTTTHH 186

The following BLAST results are available for this feature:

BLAST of MELO3C032207 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060670.1	4.3e-76	97.14	retrotransposon protein [Cucumis melo var. makuwa] >TYK23802.1 retrotransposon p...	[more]
TYK07921.1	4.1e-66	85.71	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
TYK10886.1	4.5e-65	84.29	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0067273.1	6.5e-64	82.86	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK27106.1	1.4e-63	83.57	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032207 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032207 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJR9	2.1e-76	97.14	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C7T4	2.0e-66	85.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CKC1	2.2e-65	84.29	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VGQ0	3.1e-64	82.86	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DTS8	7.0e-64	83.57	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C032207 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02210.1	1.2e-07	26.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.2e-07	26.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G30140.1	2.0e-07	42.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G27260.1	2.0e-07	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..118
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 1..120
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032207.1	MELO3C032207.1	mRNA