MELO3C032203.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032203.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Adenylyl-sulfate kinase
Location	chr11: 10426312 .. 10427178 (-)
RNA-Seq Expression	MELO3C032203.jh1
Synteny	MELO3C032203.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTGAAGGCCTTTTAACTTTCTTCTTCTTCTCCTTTATGTAATCAATTTTTGTTGGCATAAATGGTGCTCAAGACCTCACTTCCTCGGCAAATGCATATTGTAACAAGGTTCACAGGTCTCAGTGGCTCAGGTTTGTCACTAAACCTTTTGTCTTTTGCTTTTACATCTTAATGGTTTTTGACTTATTATGATTAAATCATGGTTTAGACAACCTATAGTTTAGATTGTCCTCAAATGAAACCTACAGTTTGGATTATAGACCAAACTCAACAATGGAACATTTGACTTTGGCTGGTTGTATTATAGACCTACAGTTTTTGCAACATATGCTGATGGTTAGTTAAATAGTGAAGAACTTGTGGACATAACTGGTTGTATTATAAATGACATTGTGTTTTGAACCTGATTGGGAGACCCTTTGAACTTTCTGTGTGTATTATATGTGGTGTAAATGAAAGTCAATGATTTTGGCTGTTAATTCCTCCCTTTTCAGGGGACACTTTCTTTCTCCTATGAGTCCCCACAGGCTATAGAACTGCTTATTACTATGCTTGACATGTTTGTTTGCAATAATGGAGATGATATCAGATTAAATGGTTTATTTTGATATTGCTTGTAGAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTTTAGATAGCCAGGCGATCGTTGAAGGTTGAAGACTGAGAAGACGTTTAGGATTTCTTATTTGTATTAGGATCTTGTTTCATGTACTATTGTAGAATGTGTATATAAACACAATATTAAGTTTTCATTTTGTGTATTTGTAAAAGATAAATATTGTAGTTTCTAAAATAATATTCATTTGTTGGAGCGAGAAAAAAATATTTACCTATA

mRNA sequence

ACTTGAAGGCCTTTTAACTTTCTTCTTCTTCTCCTTTATGTAATCAATTTTTGTTGGCATAAATGGTGCTCAAGACCTCACTTCCTCGGCAAATGCATATTGTAACAAGGTTCACAGGTCTCAGTGGCTCAGACCTACAGTTTTTGCAACATATGCTGATGGGGACACTTTCTTTCTCCTATGAGTCCCCACAGGCTATAGAACTGCTTATTACTATGCTTGACATAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTTTAGATAGCCAGGCGATCGTTGAAGGTTGAAGACTGAGAAGACGTTTAGGATTTCTTATTTGTATTAGGATCTTGTTTCATGTACTATTGTAGAATGTGTATATAAACACAATATTAAGTTTTCATTTTGTGTATTTGTAAAAGATAAATATTGTAGTTTCTAAAATAATATTCATTTGTTGGAGCGAGAAAAAAATATTTACCTATA

Coding sequence (CDS)

ATGGTGCTCAAGACCTCACTTCCTCGGCAAATGCATATTGTAACAAGGTTCACAGGTCTCAGTGGCTCAGACCTACAGTTTTTGCAACATATGCTGATGGGGACACTTTCTTTCTCCTATGAGTCCCCACAGGCTATAGAACTGCTTATTACTATGCTTGACATAATGATTGAAGTCATCAGATTGAAAGCTAAGCGATTGTTTAGATAG

Protein sequence

MVLKTSLPRQMHIVTRFTGLSGSDLQFLQHMLMGTLSFSYESPQAIELLITMLDIMIEVIRLKAKRLFR

Homology

[Close]

BLAST of MELO3C032203.jh1 vs. NCBI nr
Match: TYK08885.1 (adenylyl-sulfate kinase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 6.36e-08
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 34  GTLSFSYESPQAIELLITMLDIMIEVIRLKAKRLFR 69
           GTL FSYESPQAIELL TMLD+MIEVIRLKAKRL R
Sbjct: 151 GTLYFSYESPQAIELLTTMLDMMIEVIRLKAKRLCR 186

[Close]

BLAST of MELO3C032203.jh1 vs. NCBI nr
Match: KAA0052335.1 (adenylyl-sulfate kinase 3 [Cucumis melo var. makuwa] >TYK01895.1 adenylyl-sulfate kinase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 1.63e-07
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 34  GTLSFSYESPQAIELLITMLDIMIEVIRLKAKRLFR 69
           GTL FSYESPQAIELL TMLD+MIEVIRLKAKRL R
Sbjct: 283 GTLYFSYESPQAIELLTTMLDMMIEVIRLKAKRLCR 318

[Close]

BLAST of MELO3C032203.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CBK3 (Adenylyl-sulfate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00070 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.08e-08
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 34  GTLSFSYESPQAIELLITMLDIMIEVIRLKAKRLFR 69
           GTL FSYESPQAIELL TMLD+MIEVIRLKAKRL R
Sbjct: 151 GTLYFSYESPQAIELLTTMLDMMIEVIRLKAKRLCR 186

[Close]

BLAST of MELO3C032203.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BRS8 (Adenylyl-sulfate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001590 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 7.87e-08
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 0


Query: 34  GTLSFSYESPQAIELLITMLDIMIEVIRLKAKRLFR 69
           GTL FSYESPQAIELL TMLD+MIEVIRLKAKRL R
Sbjct: 283 GTLYFSYESPQAIELLTTMLDMMIEVIRLKAKRLCR 318

The following BLAST results are available for this feature:

BLAST of MELO3C032203.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08885.1	6.36e-08	88.89	adenylyl-sulfate kinase 3 [Cucumis melo var. makuwa]	[more]
KAA0052335.1	1.63e-07	88.89	adenylyl-sulfate kinase 3 [Cucumis melo var. makuwa] >TYK01895.1 adenylyl-sulfat...	[more]

BLAST of MELO3C032203.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032203.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CBK3	3.08e-08	88.89	Adenylyl-sulfate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BRS8	7.87e-08	88.89	Adenylyl-sulfate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C032203.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032203.jh1.t1	MELO3C032203.jh1.t1	mRNA