MELO3C032168 (gene) Melon (DHL92) v4

Overview
NameMELO3C032168
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Locationchr11: 15951666 .. 15955019 (-)
RNA-Seq ExpressionMELO3C032168
SyntenyMELO3C032168
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACGTTGGAGCAAATTCGGATATTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGTTTTTCTTGTATTTCAGAGTGTATCGGTGGAGTTAGAATTTCTATTTAGTATGGTTGGAAAGCTTATTCAATTAACTACAACTTTCATGAAGAAATTGTAAACCAGAAACGACTAAAAATTGGTTAAATTGTAGGAACAAGTTAAAGAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGGTTATATGTGTTTATGCACGGGGAATCAGATTTATATGTCTTCAGGTAAGTTTTAGAGGATCTCAAAATGAAGAGTTTGATATAAAGAACTCTCATTTTGGTTAAGTATTGAGAAAGTTATAGTCCTTTGAAGTTTATGTTAGAAATCTGGAAATTTTAGAGAATTGTTGAAATAGGATTTTATTTCTTAAGCTTTGTTTTCGTGAGCGTCATCTTTGGTGTGACATGTTATGTATATCTTTAGGAAACCAAAATGTTTAGGGTTTTAATACTCGGTTGGGTTGTTGGCAGGCCGAGAAGAATTAAACCGAGCTTATAGACCAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAACTTTGAAATATTTTCCATAACTGTTATTATGATTGAATGCGATAAATGTTTATTTACGAAGCCATGAAAGGTATTTGAATTTCATGACTATTTTCAAGTATACATTTGGAGACTAGATTTCTTAAAGAAATTTATGCTAGCACGTAGATATTAAATGTTTGGAAAGTATTTAAACCACAATATTTTAAGCAAAGCATGAATTAGTATGAAGTTTTGTTTTAAGAACTACAATTTTCCACGAAAGAGCTGAGTAAAGTTCGAGCTTTGTGTAAAATTTATAAGCAGGCATGTTTTAATATTTTATGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACACTGGTTAGATTTCGTTGTTGACGTTGAGTGTACTCCGTAACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCAGGCCCCACTACATCGTAGTGCTTGTAAACGTTGTTGTACTAAGTGTACCCTACACAACGTAGATTCGTCAGGTTAGTTAAAATGCTTCGATATAATTGATATGCCTTGCTAGATTTCAATGATGAACATGCTGAGTATTTAAGGAAGCTATTCTTACTATTACACATTTACATTTACGACTTGTATAAACAGATTTATATGTGTAAAGTTTTCACGTGCTCTTATCTTTAAATTCATAGTTTTAAACTGAGTCACTTGAGCTTCATAGCTCACCCTTTCCAAAATGTTTTACCCATTTTCCAGGTAGAGATCAACTTCCCGGTGCCTGATAGACTGCTTTAGTCTGCGGAGGCTTCATTATCGATTGCCAGTACGTGTTTTGAGTTGGGCATAAAGTCTGTTGTGTTGTGATGTATTCACACCCTTGTATGTTATAGATACTCCACAGTTTGTATAAGCTTTAAGAGCTGTAGTTGTGTAAATTTTGTTGGTTATATTTTGATTAAGGTGTCTTTAGGTTTACTCGTGAAATCGGTAAATTTTGAGGTACACTTCATGTATGTGTTTGACTAGCCTAGGATCCGCTGTGTTTTGTGGCATGTACAATAGTTTATATACTAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCGTCGGCTTCACGCCATCTTTCGATCTAAGGTAGCAGGTAGTCTGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTTGCTCCATGGGAATTAAGGTAGAGCGGTTAGCTCTAAGAAGAAACTGGAAAGTAAATAATTGAACGTCAAGTTAGCTTAAAGGGAACTAGTGGAGTATGGTCTAGGTAAGGGTAGAAGTGAGTCCAATTATTATTAATACGTGAGTAGACATTTAGTATCATGCATTTGAGTTAAGTATTTATAGTATGTCTAATGTGTTGACATATTATAGGAGTCGTGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGCCAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACAGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTTTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAATAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTTTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCATGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCGGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGAGGTCAGTGTTTGGTAGGTTCCGGTGTACCAGTGCGAACAGCCAGGACATTTCAAGAAAGATTGTCCGTAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGAGAGTTGTTGGAAGACCGAGGCAACAAAGAGTTGTTGGAAGACCTAAGCTATTTTCTTTGCAATTGACT

mRNA sequence

ATGAAGAACGTTGGAGCAAATTCGGATATTCATTTGGTGCTTTTTGATGAAGAAAACAGGGCAGTTGAGTGTATCGGTGGAGTTAGAATTTCTATTTAGTATGGTTGGAAAGCTTATTCAATTAACTACAACTTTCATGAAGAAATTAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGGTTATATGTGTTTATGCACGGGGAATCAGATTTATATGTCTTCAGATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACACTGGTGTCTTTAGGTTTACTCGTGAAATCGATGTGTTTGACTAGCCTAGGATCCGCTGTGTTTTGTGGCATGTACAATAGTTTATATACTAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCGTCGGCTTCACGCCATCTTTCGATCTAAGGTAGCAGGTAGTCTGGGAGGGGGAGTCGTGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGCCAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACAGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTTTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAATAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACATAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCACGGTATGCTGACGTTATTATAGCTTTTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAATTTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCGTGAGCAGCGGAGGTTCATGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCGGAGACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGCAGGAACCATCGAGGTCAGTGTTTGGTAGGTTCCGGTGTACCAGTGCGAACAGCCAGGACATTTCAAGAAAGATTGTCCGTAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAGACAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCAGTGGTGCAAGGCAAAAGAGAGTTGTTGGAAGACCGAGGCAACAAAGAGTTGTTGGAAGACCTAAGCTATTTTCTTTGCAATTGACT

Coding sequence (CDS)

ATGATTTATGAAATTTTCATTAACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGATTACCGTGTGCACACTGGTGTCTTTAGGTTTACTCGTGAAATCGATGTGTTTGACTAGCCTAGGATCCGCTGTGTTTTGTGGCATGTACAATAGTTTATATACTAGATTGGCAAGTTCATCACATGAAAGTTTTAAGCAGAGTCGACAGATACAGGTACAGAAAAGCGTTGTTCGTCGGCTTCACGCCATCTTTCGATCTAAGGTAGCAGGTAGTCTGGGAGGGGGAGTCGTGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGCAGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGCCAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACAGAATTGAACGGCTGAAGAAGTTAGGGGCTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTTTCCTGAGGAGCGAAAGGTTAGATTGGCCACATTTTTGTTGCAAAAATAG

Protein sequence

MIYEIFINYMTEILSLRLEITVCTLVSLGLLVKSMCLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSLGGGVVPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK
Homology
[Close]
BLAST of MELO3C032168 vs. NCBI nr
Match: KAA0037607.1 (uncharacterized protein E6C27_scaffold277G002620 [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-87
Identity = 190/239 (79.50%), Postives = 193/239 (80.75%), Query Frame = 0 

Query: 10  MTEILSLRLEITVCTL----------------------VSLGLLVKS------------- 69
           MTEILSLRLEITV TL                      VSLGLLVKS             
Sbjct: 1   MTEILSLRLEITVGTLVEIEFPCLIDCLSLRKLHYRLPVSLGLLVKSVNFEVHFMYVFDW 60

Query: 70  MCLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSLGG 129
           +CLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVA     
Sbjct: 61  LCLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVA----- 120

Query: 130 GVVPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPS 189
           GV+PPRTGRRRRQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFA TTQ+IGRPDRAEPS
Sbjct: 121 GVMPPRTGRRRRQNQDGMQGPTQAPSVGESSTLGVRGGAGNEQFAGTTQKIGRPDRAEPS 180

Query: 190 DPEKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           DPEKAY IERLKKLGATVFEGSTDPAD ENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 181 DPEKAYGIERLKKLGATVFEGSTDPADVENWLNMLEKCFDVMNCPEERKVRLATFLLQK 234

[Close]
BLAST of MELO3C032168 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 313.2 bits (801), Expect = 1.8e-81
Identity = 164/177 (92.66%), Postives = 166/177 (93.79%), Query Frame = 0 

Query: 37  LTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSLGGGV 96
           L  LGS VFCGMYNSLYTRLASSSHESFKQSRQIQVQK+VVRRLHAIFRSKVA     GV
Sbjct: 195 LPYLGSDVFCGMYNSLYTRLASSSHESFKQSRQIQVQKNVVRRLHAIFRSKVA-----GV 254

Query: 97  VPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDP 156
           +PPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDP
Sbjct: 255 MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 314

Query: 157 EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           EKAY IERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 315 EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQK 366

[Close]
BLAST of MELO3C032168 vs. NCBI nr
Match: KAA0035073.1 (uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 1.4e-65
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 0 

Query: 66  QSRQIQVQKSVVRRLHAIFRSKVAGSLGGGVVPPRTGRRRRQNQDGMQGPTQGPSVGESS 125
           +SRQIQVQKSVVRRLHAIFRSKVA     GV+PPRTGR+RRQNQDGMQGPTQGPSVGESS
Sbjct: 177 ESRQIQVQKSVVRRLHAIFRSKVA-----GVMPPRTGRQRRQNQDGMQGPTQGPSVGESS 236

Query: 126 TLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYRIERLKKLGATVFEGSTDPADAENW 185
           TLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAY IERLKKLGATVFEGSTD ADAENW
Sbjct: 237 TLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDLADAENW 296

Query: 186 LNMLEKCFDVMNFPEERKVRLATFLLQK 214
           LNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 297 LNMLEKCFDVMNCPEERKVRLATFLLQK 319

[Close]
BLAST of MELO3C032168 vs. NCBI nr
Match: KAA0042134.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 4.9e-63
Identity = 135/174 (77.59%), Postives = 140/174 (80.46%), Query Frame = 0 

Query: 66  QSRQIQVQKSVVRRLHAIFRSKVAGSLGGG--------------------------VVPP 125
           +S  ++VQKSVVR+LHAIFRSKVAGS GGG                          V+PP
Sbjct: 89  KSVNLEVQKSVVRQLHAIFRSKVAGSPGGGVTTWYQSSLLHGNEGRAVSSKKKLERVMPP 148

Query: 126 RTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKA 185
           RTGRRRRQ QDGMQGPTQGPSVGESSTLGVRGGAGNEQF RTT EIGRPDRAEPSDPEKA
Sbjct: 149 RTGRRRRQIQDGMQGPTQGPSVGESSTLGVRGGAGNEQFVRTTSEIGRPDRAEPSDPEKA 208

Query: 186 YRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           Y IERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 209 YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQK 262

[Close]
BLAST of MELO3C032168 vs. NCBI nr
Match: KAA0054814.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 6.8e-57
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 97  VPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDP 156
           +PPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDR EPSDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRVEPSDP 60

Query: 157 EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 61  EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQK 117

[Close]
BLAST of MELO3C032168 vs. ExPASy TrEMBL
Match: A0A5A7T7T0 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002620 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.2e-88
Identity = 190/239 (79.50%), Postives = 193/239 (80.75%), Query Frame = 0 

Query: 10  MTEILSLRLEITVCTL----------------------VSLGLLVKS------------- 69
           MTEILSLRLEITV TL                      VSLGLLVKS             
Sbjct: 1   MTEILSLRLEITVGTLVEIEFPCLIDCLSLRKLHYRLPVSLGLLVKSVNFEVHFMYVFDW 60

Query: 70  MCLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSLGG 129
           +CLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVA     
Sbjct: 61  LCLTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVA----- 120

Query: 130 GVVPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPS 189
           GV+PPRTGRRRRQNQDGMQGPTQ PSVGESSTLGVRGGAGNEQFA TTQ+IGRPDRAEPS
Sbjct: 121 GVMPPRTGRRRRQNQDGMQGPTQAPSVGESSTLGVRGGAGNEQFAGTTQKIGRPDRAEPS 180

Query: 190 DPEKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           DPEKAY IERLKKLGATVFEGSTDPAD ENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 181 DPEKAYGIERLKKLGATVFEGSTDPADVENWLNMLEKCFDVMNCPEERKVRLATFLLQK 234

[Close]
BLAST of MELO3C032168 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.6e-82
Identity = 164/177 (92.66%), Postives = 166/177 (93.79%), Query Frame = 0 

Query: 37  LTSLGSAVFCGMYNSLYTRLASSSHESFKQSRQIQVQKSVVRRLHAIFRSKVAGSLGGGV 96
           L  LGS VFCGMYNSLYTRLASSSHESFKQSRQIQVQK+VVRRLHAIFRSKVA     GV
Sbjct: 195 LPYLGSDVFCGMYNSLYTRLASSSHESFKQSRQIQVQKNVVRRLHAIFRSKVA-----GV 254

Query: 97  VPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDP 156
           +PPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGR DRAEPSDP
Sbjct: 255 MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDP 314

Query: 157 EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           EKAY IERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 315 EKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQK 366

[Close]
BLAST of MELO3C032168 vs. ExPASy TrEMBL
Match: A0A5A7SX02 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001380 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 6.6e-66
Identity = 136/148 (91.89%), Postives = 139/148 (93.92%), Query Frame = 0 

Query: 66  QSRQIQVQKSVVRRLHAIFRSKVAGSLGGGVVPPRTGRRRRQNQDGMQGPTQGPSVGESS 125
           +SRQIQVQKSVVRRLHAIFRSKVA     GV+PPRTGR+RRQNQDGMQGPTQGPSVGESS
Sbjct: 177 ESRQIQVQKSVVRRLHAIFRSKVA-----GVMPPRTGRQRRQNQDGMQGPTQGPSVGESS 236

Query: 126 TLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKAYRIERLKKLGATVFEGSTDPADAENW 185
           TLGVRGGAGNEQFARTTQEIGR DRAEPSDPEKAY IERLKKLGATVFEGSTD ADAENW
Sbjct: 237 TLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDLADAENW 296

Query: 186 LNMLEKCFDVMNFPEERKVRLATFLLQK 214
           LNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 297 LNMLEKCFDVMNCPEERKVRLATFLLQK 319

[Close]
BLAST of MELO3C032168 vs. ExPASy TrEMBL
Match: A0A5A7TFC5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006220 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.4e-63
Identity = 135/174 (77.59%), Postives = 140/174 (80.46%), Query Frame = 0 

Query: 66  QSRQIQVQKSVVRRLHAIFRSKVAGSLGGG--------------------------VVPP 125
           +S  ++VQKSVVR+LHAIFRSKVAGS GGG                          V+PP
Sbjct: 89  KSVNLEVQKSVVRQLHAIFRSKVAGSPGGGVTTWYQSSLLHGNEGRAVSSKKKLERVMPP 148

Query: 126 RTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDPEKA 185
           RTGRRRRQ QDGMQGPTQGPSVGESSTLGVRGGAGNEQF RTT EIGRPDRAEPSDPEKA
Sbjct: 149 RTGRRRRQIQDGMQGPTQGPSVGESSTLGVRGGAGNEQFVRTTSEIGRPDRAEPSDPEKA 208

Query: 186 YRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           Y IERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 209 YGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQK 262

[Close]
BLAST of MELO3C032168 vs. ExPASy TrEMBL
Match: A0A5A7UI35 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G001040 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 3.3e-57
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 97  VPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRAEPSDP 156
           +PPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDR EPSDP
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRPDRVEPSDP 60

Query: 157 EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNFPEERKVRLATFLLQK 214
           EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMN PEERKVRLATFLLQK
Sbjct: 61  EKAYRIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRLATFLLQK 117

The following BLAST results are available for this feature:
BLAST of MELO3C032168 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C032168 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037607.11.3e-8779.50uncharacterized protein E6C27_scaffold277G002620 [Cucumis melo var. makuwa][more]
KAA0056684.11.8e-8192.66DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0035073.11.4e-6591.89uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa][more]
KAA0042134.14.9e-6377.59DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0054814.16.8e-5797.44reverse transcriptase [Cucumis melo var. makuwa][more]
BLAST of MELO3C032168 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T7T06.2e-8879.50Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7UNA38.6e-8292.66Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73... [more]
A0A5A7SX026.6e-6691.89CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7TFC52.4e-6377.59Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
A0A5A7UI353.3e-5797.44Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
BLAST of MELO3C032168 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032168.1MELO3C032168.1mRNA