MELO3C032154 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032154
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein Ycf2-like
Location	chr06: 22829041 .. 22829372 (-)
RNA-Seq Expression	MELO3C032154
Synteny	MELO3C032154

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGAATAATAGAAGCAATAAGGAGTCAACAATCTAGTTCTTCGGGTGCCCAATACATCAATGAATTTATGGTAAGCATGTTCTGTAGACTTTAATAATCTGTGTGCATGTGACAGAACCTTAACAAATACACTGTATCTGATATGTATTTGTTATGCAGGGAGCGAGGGCATTTGAAGAACACCTTGACAAAGTGAAGGAGGACCAAGAAGAAGATGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACGGTGCTTGAAAAAAGGGATGACGATAAAGACAAAGATGGAAAAGGGCTCATGGATGAAAGTCGAGCATAA

mRNA sequence

ATGAATAGAATAATAGAAGCAATAAGGAGTCAACAATCTAGTTCTTCGGGTGCCCAATACATCAATGAATTTATGGGAGCGAGGGCATTTGAAGAACACCTTGACAAAGTGAAGGAGGACCAAGAAGAAGATGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACGGTGCTTGAAAAAAGGGATGACGATAAAGACAAAGATGGAAAAGGGCTCATGGATGAAAGTCGAGCATAA

Coding sequence (CDS)

ATGAATAGAATAATAGAAGCAATAAGGAGTCAACAATCTAGTTCTTCGGGTGCCCAATACATCAATGAATTTATGGGAGCGAGGGCATTTGAAGAACACCTTGACAAAGTGAAGGAGGACCAAGAAGAAGATGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACGGTGCTTGAAAAAAGGGATGACGATAAAGACAAAGATGGAAAAGGGCTCATGGATGAAAGTCGAGCATAA

Protein sequence

MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVLEKRDDDKDKDGKGLMDESRA

Homology

[Close]

BLAST of MELO3C032154 vs. NCBI nr
Match: TYK19697.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN IIEAIRSQQ SSSG QY +EFMGARAFEEHLDKVKEDQEE DDVEDLNLDSSNPTVL
Sbjct: 237 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEE-DDVEDLNLDSSNPTVL 296

Query: 61  EKRDDDKDKDGKGLMDESRA 81
           EKRDDD+DKDGK LM ESRA
Sbjct: 297 EKRDDDEDKDGKRLMGESRA 315

[Close]

BLAST of MELO3C032154 vs. NCBI nr
Match: KAA0041558.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN IIEAIRSQQ SSSG QY +EFMGARAFEEHLDKVKEDQEE DDVEDLNLDSSNPTVL
Sbjct: 483 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEE-DDVEDLNLDSSNPTVL 542

Query: 61  EKRDDDKDKDGKGLMDESRA 81
           EKRDDD+DKDGK LM ESRA
Sbjct: 543 EKRDDDEDKDGKRLMGESRA 561

[Close]

BLAST of MELO3C032154 vs. NCBI nr
Match: KAA0051382.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 5.8e-25
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN I++AIRSQQ SSSG QY +EFMGARAFEEHLDKV+EDQEE DDVEDLNLDSSN TVL
Sbjct: 276 MNGIMKAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVEEDQEE-DDVEDLNLDSSNRTVL 335

Query: 61  EKRDDDKDKDGKGLMDESRA 81
           EKRDDD+DKDGKGLMDESRA
Sbjct: 336 EKRDDDEDKDGKGLMDESRA 354

[Close]

BLAST of MELO3C032154 vs. NCBI nr
Match: KAA0033908.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 7.5e-25
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN IIEAIRSQQSSSSGAQY NEFMGARAFEEHL+KV+EDQ+E DD+EDLNLDS+NPTVL
Sbjct: 53  MNGIIEAIRSQQSSSSGAQYTNEFMGARAFEEHLEKVEEDQDE-DDIEDLNLDSTNPTVL 112

Query: 61  EKRDDDKDKDGKGLMDES 79
            K+DDD+DKDGKGLMDES
Sbjct: 113 GKKDDDEDKDGKGLMDES 129

[Close]

BLAST of MELO3C032154 vs. NCBI nr
Match: KAA0038034.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24
Identity = 69/80 (86.25%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
          MN IIEAIRSQQ SSSG QY +EFMGARAFEEHLDKV+ED EE DDVEDLNLDSSNPTV 
Sbjct: 1  MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVEEDHEE-DDVEDLNLDSSNPTVP 60

Query: 61 EKRDDDKDKDGKGLMDESRA 81
           KRDDD+DKDGKGLMDESRA
Sbjct: 61 GKRDDDEDKDGKGLMDESRA 79

[Close]

BLAST of MELO3C032154 vs. ExPASy TrEMBL
Match: A0A5D3D818 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00980 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.3e-26
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN IIEAIRSQQ SSSG QY +EFMGARAFEEHLDKVKEDQEE DDVEDLNLDSSNPTVL
Sbjct: 237 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEE-DDVEDLNLDSSNPTVL 296

Query: 61  EKRDDDKDKDGKGLMDESRA 81
           EKRDDD+DKDGK LM ESRA
Sbjct: 297 EKRDDDEDKDGKRLMGESRA 315

[Close]

BLAST of MELO3C032154 vs. ExPASy TrEMBL
Match: A0A5A7TF74 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00140 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.3e-26
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN IIEAIRSQQ SSSG QY +EFMGARAFEEHLDKVKEDQEE DDVEDLNLDSSNPTVL
Sbjct: 483 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEE-DDVEDLNLDSSNPTVL 542

Query: 61  EKRDDDKDKDGKGLMDESRA 81
           EKRDDD+DKDGK LM ESRA
Sbjct: 543 EKRDDDEDKDGKRLMGESRA 561

[Close]

BLAST of MELO3C032154 vs. ExPASy TrEMBL
Match: A0A5A7U6E1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001210 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-25
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN I++AIRSQQ SSSG QY +EFMGARAFEEHLDKV+EDQEE DDVEDLNLDSSN TVL
Sbjct: 276 MNGIMKAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVEEDQEE-DDVEDLNLDSSNRTVL 335

Query: 61  EKRDDDKDKDGKGLMDESRA 81
           EKRDDD+DKDGKGLMDESRA
Sbjct: 336 EKRDDDEDKDGKGLMDESRA 354

[Close]

BLAST of MELO3C032154 vs. ExPASy TrEMBL
Match: A0A5A7STF8 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00990 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.6e-25
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1   MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
           MN IIEAIRSQQSSSSGAQY NEFMGARAFEEHL+KV+EDQ+E DD+EDLNLDS+NPTVL
Sbjct: 53  MNGIIEAIRSQQSSSSGAQYTNEFMGARAFEEHLEKVEEDQDE-DDIEDLNLDSTNPTVL 112

Query: 61  EKRDDDKDKDGKGLMDES 79
            K+DDD+DKDGKGLMDES
Sbjct: 113 GKKDDDEDKDGKGLMDES 129

[Close]

BLAST of MELO3C032154 vs. ExPASy TrEMBL
Match: A0A5A7T3J1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002330 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.2e-25
Identity = 69/80 (86.25%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1  MNRIIEAIRSQQSSSSGAQYINEFMGARAFEEHLDKVKEDQEEDDDVEDLNLDSSNPTVL 60
          MN IIEAIRSQQ SSSG QY +EFMGARAFEEHLDKV+ED EE DDVEDLNLDSSNPTV 
Sbjct: 1  MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVEEDHEE-DDVEDLNLDSSNPTVP 60

Query: 61 EKRDDDKDKDGKGLMDESRA 81
           KRDDD+DKDGKGLMDESRA
Sbjct: 61 GKRDDDEDKDGKGLMDESRA 79

The following BLAST results are available for this feature:

BLAST of MELO3C032154 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK19697.1	1.5e-25	88.75	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0041558.1	1.5e-25	88.75	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0051382.1	5.8e-25	86.25	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0033908.1	7.5e-25	85.90	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0038034.1	1.3e-24	86.25	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032154 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032154 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D818	7.3e-26	88.75	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00...	[more]
A0A5A7TF74	7.3e-26	88.75	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001...	[more]
A0A5A7U6E1	2.8e-25	86.25	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001...	[more]
A0A5A7STF8	3.6e-25	85.90	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G...	[more]
A0A5A7T3J1	6.2e-25	86.25	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002...	[more]

BLAST of MELO3C032154 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032154.1	MELO3C032154.1	mRNA