MELO3C032144 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032144
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Retrotransposon protein
Location	chr01: 29245070 .. 29246149 (+)
RNA-Seq Expression	MELO3C032144
Synteny	MELO3C032144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGTTAAATTGTGAAATTACTAACGTACTCCATGTATTTTTTGTAATTTGTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCAAGACATGTCTGGACGAAGGAGAAGGAGGGCACTCTTGTGGAATGTTTAGTGGAGTTGGTGTAAATGGGGGGATGGAAATCAGATAATGGTACGTTCTGTCCAGGTTACCTTATGCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATCGCCGAAATGCGGGGGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTACGGAGAAAGAATTATTTGATAATTGGGTTAGGGTAAGGAAAATAATATAAACGTCACACAACGTTCACAATGTACATTTACTTAACAATTTTTCAATCAGTACTCATACGTGATATTTTTTTTCCCACAGTCGCATCATGCAGCGAAGAGACTCCTGAACAAACCATTCCCGTATTATGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGAGTCGGTTAGCTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTGACAGATATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTACCACCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACAATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAGATCGAGTGGATCCAAGAGAAAGAGGAGAAGTCAGCGAGACTTGGATGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAAGCAGATTGCGGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGTGCACGGAATAATTCTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGCTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGAGGTTACGTACTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATCACGAGATA

mRNA sequence

ACTGTTAAATTGTGAAATTACTAACGTACTCCATGTATTTTTTGTAATTTGTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCAAGACATGTCTGGACGAAGGAGAAGGAGGGCACTCTTGTGGAATGTTTAGTGGAGTTGGTGTAAATGGGGGGATGGAAATCAGATAATGGTACGTTCTGTCCAGGTTACCTTATGCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATCGCCGAAATGCGGGGGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTACGGAGAAAGAATTATTTGATAATTGGGTTAGGTCGCATCATGCAGCGAAGAGACTCCTGAACAAACCATTCCCGTATTATGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGAGTCGGTTAGCTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTGACAGATATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTACCACCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACAATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAGATCGAGTGGATCCAAGAGAAAGAGGAGAAGTCAGCGAGACTTGGATGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAAGCAGATTGCGGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGCTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGAGGTTACGTACTCATGCCTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATCACGAGATA

Coding sequence (CDS)

ATGGGGGGATGGAAATCAGATAATGGTACGTTCTGTCCAGGTTACCTTATGCAGTTGGTACGCATAATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTGAAGCGAACATTCCAGGCCATCGCCGAAATGCGGGGGCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTACGGAGAAAGAATTATTTGATAATTGGGTTAGGTCGCATCATGCAGCGAAGAGACTCCTGAACAAACCATTCCCGTATTATGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGAGTCGGTTAGCTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTGACAGATATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTACCACCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACAATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGACCAGATCGAGTGGATCCAAGAGAAAGAGGAGAAGTCAGCGAGACTTGGATGTTGAAGCCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAAGCAGATTGCGGAGTGGCCTGCACGCACCCTTGCAAATGACAACCATGTGCATATTGCGTGA

Protein sequence

MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETFADVGSNEPDRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRKRRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHVHIA

Homology

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BLAST of MELO3C032144 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 404.1 bits (1037), Expect = 8.0e-109
Identity = 198/220 (90.00%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCII EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD DVEAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108
Identity = 195/220 (88.64%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. NCBI nr
Match: TYK21395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108
Identity = 195/220 (88.64%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. NCBI nr
Match: KAA0044610.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 194/220 (88.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRAS+GRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. NCBI nr
Match: KAA0033744.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046274.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049705.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0057135.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 194/220 (88.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL++IAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLREIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. ExPASy TrEMBL
Match: A0A5A7VES2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002250 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.9e-109
Identity = 198/220 (90.00%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCII EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD DVEAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 195/220 (88.64%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. ExPASy TrEMBL
Match: A0A5A7SRU1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00100 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 195/220 (88.64%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.3e-108
Identity = 194/220 (88.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRASEGRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL++IAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLREIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. ExPASy TrEMBL
Match: A0A5A7TN44 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003610 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.3e-108
Identity = 194/220 (88.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGGWKSDNGTFCPGYLMQLVRIMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 60
           MGGWKSDNGTF PGYL QLVR+MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC
Sbjct: 30  MGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPAC 89

Query: 61  SGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKPFPYYDELTYVFGRDRATSRLAETF 120
           SGFGWNDEEKCI+ EKELFDNWVRSH AAK LLNKPFPYYDELTYVFGRDRAT R AETF
Sbjct: 90  SGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETF 149

Query: 121 ADVGSNEP-DRYDRFDMGDGNEELPPVYSQGIDLSQNNVRASRPSRASEGRTRSSGSKRK 180
           ADVGSNEP   YDRFDMGDGNE+ PPVYSQG+D+SQ++VRASRPSRAS+GRT SSGSKRK
Sbjct: 150 ADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRK 209

Query: 181 RRSQRDLDVEAIHLALDQTNEQLKQIAEWPARTLANDNHV 220
           R SQRD ++EAIHLALDQTNEQL+QIAEWPAR LANDNHV
Sbjct: 210 RGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHV 249

[Close]

BLAST of MELO3C032144 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 31/119 (26.05%), Postives = 55/119 (46.22%), Query Frame = 0


Query: 37  VIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKP 96
           V+  R K+L+R F AI  +      GF W++E + +  +  ++ +++++H  A++ + +P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 97  FPYYDELTYVFGRDRATSRLAETFADVGSNEPDRYDRFDMGDGNEELPPVYSQG-IDLS 155
            PYY +L  + G             D G  E + +   D  D   E     S G  DLS
Sbjct: 296 IPYYKDLCVLCG-------------DSGIEENECFVAMDWFDPETEFQEFKSSGTTDLS 339

[Close]

BLAST of MELO3C032144 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 31/119 (26.05%), Postives = 55/119 (46.22%), Query Frame = 0


Query: 37  VIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIITEKELFDNWVRSHHAAKRLLNKP 96
           V+  R K+L+R F AI  +      GF W++E + +  +  ++ +++++H  A++ + +P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 97  FPYYDELTYVFGRDRATSRLAETFADVGSNEPDRYDRFDMGDGNEELPPVYSQG-IDLS 155
            PYY +L  + G             D G  E + +   D  D   E     S G  DLS
Sbjct: 296 IPYYKDLCVLCG-------------DSGIEENECFVAMDWFDPETEFQEFKSSGTTDLS 339

The following BLAST results are available for this feature:

BLAST of MELO3C032144 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066208.1	8.0e-109	90.00	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032766.1	6.8e-108	88.64	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK21395.1	6.8e-108	88.64	retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon p...	[more]
KAA0044610.1	1.5e-107	88.18	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0033744.1	1.5e-107	88.18	retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon...	[more]

BLAST of MELO3C032144 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VES2	3.9e-109	90.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DCZ1	3.3e-108	88.64	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SRU1	3.3e-108	88.64	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TRV1	7.3e-108	88.18	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TN44	7.3e-108	88.18	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C032144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02210.1	1.2e-06	26.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.2e-06	26.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..170
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 2..205
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 2..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032144.1	MELO3C032144.1	mRNA