MELO3C032137 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032137
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr06: 21906059 .. 21906799 (+)
RNA-Seq Expression	MELO3C032137
Synteny	MELO3C032137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACAGGCATTATGTCATCGTTATATCCACGTCATAATTTTTTGGAGACGGACGCTATGTTCCTCGAGTTTGAGGATGAGTTAGATAACTTTGCAGGAGGGTCGTCATCGGTGGGCGACAATACAAGTGAGTATAAGAATTTCTTTCATTTTAACTTACGATTATTTCATGTTTTTTTCTCTAACATTATATGTTATTACCGATTTATTGAACAAGGTCGTCTTTTCAACAACCTGGAACTCCGACTCCTAGGAGACGTGCACAGTCTCAACTCTTAGAGTTAGAGCACCACGTTGCAGTATATGGGCACATTTCGATGACGATAGCCCCTGGTGCAGAGAAACCTATTTCCTCATACGTCGTTCGCTTTAGCTAGACGATAGGCGTGTGTGTGCGAAAGACATCTTTCATCCACTGCCTTAAGTGGGCGGATGTTCACAGGGAATACATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTAAGTCCACTACACATTCATGATTTCATTTGAAACATATCTAAGTTAACCAATCTAATGTGTTATTTTTGTAATGTGTAGCAGTTTTTTGTGCTTAATTTCAATGATCAAGTAATGAATAGGTTTGTTGAGCATCAGATGCTCACCATCTTAAAAAATTTCCGGACCGACTATCACAAACACTTCAAAAAGTACAGCAACCCTGACGAGGCTCGTGCCAGCCCATCAAACATATTGGTTGGACGTCATGAGGATTGA

mRNA sequence

ATGTCCACAGGCATTATGTCATCGTTATATCCACGTCATAATTTTTTGGAGACGGACGCTATGTTCCTCGAGTTTGAGGATGAGTTAGATAACTTTGCAGGAGGGTCGTCATCGGTGGGCGACAATACAAGTGAGTCGTCTTTTCAACAACCTGGAACTCCGACTCCTAGGAGACGTGCACAGTCTCAACTCTTAGAGTTAGAGCACCACGTTGCAGTATATGGGCACATTTCGATGACGATAGCCCCTGGTGCAGAGAAACCTATTTCCTCATACGTCGTTCGCTTTAGCTAGACGATAGGCGTGTGTGTGCGAAAGACATCTTTCATCCACTGCCTTAAGTGGGCGGATGTTCACAGGGAATACATTGAGGTCGTCAAGGGCGACCTCCAGTTTTTTGTGCTTAATTTCAATGATCAAGTAATGAATAGGTTTGTTGAGCATCAGATGCTCACCATCTTAAAAAATTTCCGGACCGACTATCACAAACACTTCAAAAAGTACAGCAACCCTGACGAGGCTCGTGCCAGCCCATCAAACATATTGGTTGGACGTCATGAGGATTGA

Coding sequence (CDS)

ATGTCCACAGGCATTATGTCATCGTTATATCCACGTCATAATTTTTTGGAGACGGACGCTATGTTCCTCGAGTTTGAGGATGAGTTAGATAACTTTGCAGGAGGGTCGTCATCGGTGGGCGACAATACAAGTGAGTCGTCTTTTCAACAACCTGGAACTCCGACTCCTAGGAGACGTGCACAGTCTCAACTCTTAGAGTTAGAGCACCACGTTGCAGTATATGGGCACATTTCGATGACGATAGCCCCTGGTGCAGAGAAACCTATTTCCTCATACGTCGTTCGCTTTAGCTAG

Protein sequence

MSTGIMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQLLELEHHVAVYGHISMTIAPGAEKPISSYVVRFS

Homology

[Close]

BLAST of MELO3C032137 vs. NCBI nr
Match: KAA0067621.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-29
Identity = 70/94 (74.47%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 4   GIMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQ 63
           GIMSS YPRHNFLETDA+FL+FEDELDNF GGSSSVG+N      QQP  PTPRRRAQS+
Sbjct: 341 GIMSSAYPRHNFLETDAIFLKFEDELDNFVGGSSSVGNNAVGPYSQQPIIPTPRRRAQSR 400

Query: 64  LLELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LLE+EHH+AV+G ISMTIA GAEK ISS+ + FS
Sbjct: 401 LLEMEHHIAVHGRISMTIALGAEKSISSHALHFS 434

[Close]

BLAST of MELO3C032137 vs. NCBI nr
Match: TYJ97142.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 3.6e-29
Identity = 71/94 (75.53%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 4   GIMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQ 63
           GIMSS YPRHNFLETDA+FL+FEDELDNF GGSSSVG+N    S QQP  PTPRRRAQS+
Sbjct: 377 GIMSSAYPRHNFLETDAIFLKFEDELDNFVGGSSSVGNNAGPYS-QQPIIPTPRRRAQSR 436

Query: 64  LLELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LLE+EHH+AV+G ISMTIA GAEK ISS+ + FS
Sbjct: 437 LLEMEHHIAVHGRISMTIALGAEKSISSHALHFS 469

[Close]

BLAST of MELO3C032137 vs. NCBI nr
Match: KAA0035844.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK30293.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 6.1e-29
Identity = 71/93 (76.34%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 5   IMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQL 64
           IMSS YPR+NFLETDAMFLEFED+LDN AGGSS +GDNT+ SS QQP TPTPRR  QSQL
Sbjct: 181 IMSSSYPRNNFLETDAMFLEFEDDLDNIAGGSSFMGDNTTRSSSQQPATPTPRRCTQSQL 240

Query: 65  LELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LELE HV + G I M IA GAEKPIS +VVRFS
Sbjct: 241 LELERHVTINGRILMMIAFGAEKPISPHVVRFS 273

[Close]

BLAST of MELO3C032137 vs. NCBI nr
Match: KAA0038961.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 8.0e-29
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 5   IMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQL 64
           IMSS Y R+NF+ETDAMFLEFE++LDN AGGSSS+GDNT+ SS QQP TPTPRRRAQS+L
Sbjct: 106 IMSSSYQRNNFMETDAMFLEFENDLDNIAGGSSSLGDNTAGSSSQQPATPTPRRRAQSRL 165

Query: 65  LELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LELE HVA+ G I MTIA GA+KPIS + VRFS
Sbjct: 166 LELERHVAINGCIPMTIAHGAKKPISPHTVRFS 198

[Close]

BLAST of MELO3C032137 vs. NCBI nr
Match: KAA0033533.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ95656.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 136.0 bits (341), Expect = 1.8e-28
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MSTGIMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRA 60
           MST IMSS YPR NF++TDAMFLEFED+LDN  GG SSVGD+T+ SS QQP TPTPRRRA
Sbjct: 120 MSTAIMSSSYPR-NFMKTDAMFLEFEDDLDNITGGLSSVGDDTAGSSSQQPATPTPRRRA 179

Query: 61  QSQLLELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
            S+LLELE  VA+ G I MTIAPG EKPIS + VRFS
Sbjct: 180 HSRLLELERQVAINGRIPMTIAPGVEKPISPHAVRFS 215

[Close]

BLAST of MELO3C032137 vs. ExPASy TrEMBL
Match: A0A5A7VPX1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00930 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29
Identity = 70/94 (74.47%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 4   GIMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQ 63
           GIMSS YPRHNFLETDA+FL+FEDELDNF GGSSSVG+N      QQP  PTPRRRAQS+
Sbjct: 341 GIMSSAYPRHNFLETDAIFLKFEDELDNFVGGSSSVGNNAVGPYSQQPIIPTPRRRAQSR 400

Query: 64  LLELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LLE+EHH+AV+G ISMTIA GAEK ISS+ + FS
Sbjct: 401 LLEMEHHIAVHGRISMTIALGAEKSISSHALHFS 434

[Close]

BLAST of MELO3C032137 vs. ExPASy TrEMBL
Match: A0A5D3BBD4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00140 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29
Identity = 71/94 (75.53%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 4   GIMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQ 63
           GIMSS YPRHNFLETDA+FL+FEDELDNF GGSSSVG+N    S QQP  PTPRRRAQS+
Sbjct: 377 GIMSSAYPRHNFLETDAIFLKFEDELDNFVGGSSSVGNNAGPYS-QQPIIPTPRRRAQSR 436

Query: 64  LLELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LLE+EHH+AV+G ISMTIA GAEK ISS+ + FS
Sbjct: 437 LLEMEHHIAVHGRISMTIALGAEKSISSHALHFS 469

[Close]

BLAST of MELO3C032137 vs. ExPASy TrEMBL
Match: A0A5A7SWY0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00570 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.0e-29
Identity = 71/93 (76.34%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 5   IMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQL 64
           IMSS YPR+NFLETDAMFLEFED+LDN AGGSS +GDNT+ SS QQP TPTPRR  QSQL
Sbjct: 181 IMSSSYPRNNFLETDAMFLEFEDDLDNIAGGSSFMGDNTTRSSSQQPATPTPRRCTQSQL 240

Query: 65  LELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LELE HV + G I M IA GAEKPIS +VVRFS
Sbjct: 241 LELERHVTINGRILMMIAFGAEKPISPHVVRFS 273

[Close]

BLAST of MELO3C032137 vs. ExPASy TrEMBL
Match: A0A5A7TBG7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00370 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.9e-29
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 5   IMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRAQSQL 64
           IMSS Y R+NF+ETDAMFLEFE++LDN AGGSSS+GDNT+ SS QQP TPTPRRRAQS+L
Sbjct: 106 IMSSSYQRNNFMETDAMFLEFENDLDNIAGGSSSLGDNTAGSSSQQPATPTPRRRAQSRL 165

Query: 65  LELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
           LELE HVA+ G I MTIA GA+KPIS + VRFS
Sbjct: 166 LELERHVAINGCIPMTIAHGAKKPISPHTVRFS 198

[Close]

BLAST of MELO3C032137 vs. ExPASy TrEMBL
Match: A0A5A7SSV3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00850 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.6e-29
Identity = 71/97 (73.20%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 1   MSTGIMSSLYPRHNFLETDAMFLEFEDELDNFAGGSSSVGDNTSESSFQQPGTPTPRRRA 60
           MST IMSS YPR NF++TDAMFLEFED+LDN  GG SSVGD+T+ SS QQP TPTPRRRA
Sbjct: 120 MSTAIMSSSYPR-NFMKTDAMFLEFEDDLDNITGGLSSVGDDTAGSSSQQPATPTPRRRA 179

Query: 61  QSQLLELEHHVAVYGHISMTIAPGAEKPISSYVVRFS 98
            S+LLELE  VA+ G I MTIAPG EKPIS + VRFS
Sbjct: 180 HSRLLELERQVAINGRIPMTIAPGVEKPISPHAVRFS 215

The following BLAST results are available for this feature:

BLAST of MELO3C032137 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067621.1	2.1e-29	74.47	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ97142.1	3.6e-29	75.53	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0035844.1	6.1e-29	76.34	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK30293.1 CACTA en-...	[more]
KAA0038961.1	8.0e-29	75.27	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0033533.1	1.8e-28	73.20	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ95656.1 CACTA en-...	[more]

BLAST of MELO3C032137 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VPX1	1.0e-29	74.47	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BBD4	1.7e-29	75.53	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SWY0	3.0e-29	76.34	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TBG7	3.9e-29	75.27	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7SSV3	8.6e-29	73.20	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C032137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032137.1	MELO3C032137.1	mRNA