MELO3C032112 (gene) Melon (DHL92) v4

Overview


Name	MELO3C032112
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Gag/pol protein
Location	chr06: 20478630 .. 20488000 (-)
RNA-Seq Expression	MELO3C032112
Synteny	MELO3C032112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTTCATTCATTCAGGTAAGAAGAGATTGTATTCATCTTCACTTAACCCTTTGTCTTGTCTTGGAAATTGGTGGGATATTTTGAATTTTTTTTGGAACACTTCTGGTTTGATGTTAAATGTGACTAAAATCTTGCTTATTGGTTTCAATATGAGTAAGGAGGGAGTTGAAGAATGGGCAGAGGAGTTTCAATATAAAATAGGAGTATTTCTGCTGTTTTTGTTCCTTCTTGGCGGTGGCGGCTGCAGCTACAAATGACTATATGAAGCTCTTCCTCTTGATTCTCTTCATAGTCTCATAGTCTTGTTGTTTTTATAAGCTTTTGATGGCCATGAATTAGAATTCTTTCTACTGTTTTTGTTCCTTCTTGGCAGCGGCTGCAGCAGCTACATATGCCTTGACACTGGAGGTTTTTAACATTCCTTTATGTTCAATGTGTAATCCTATTTCATCAACATCGGTTAAGAAACATTTCTCATGTATTAATTTAACAAATAAGAATGCTATCCTTAGGCTCACTTGTGGGTTAAAACTGTCAGTACACACGCATATATTGTTTTTCTTCTTCCAAAGATTTGGTTTACCTTTTCTAGTATGGATATGATTTTGGTTTCAGGAGAACATTTAATTGCTCCATGCCATTGCAAAGGCACTCAAAAGTATGTCCATAGATCAGTTTTCTCTCACTTCGTGTTTGCTTCTATGTTCTTTATTCACACTCTTTAATTAATGGGGTTTTTGTTTAGGAGTGAATATTAGGTTTTCATAATGTGGGTGTTAATTGTTTGTGTATAATCACGTTTGTTGGTTGAAATTTTGTCTATTTAGGGTGAAATGGGTCTAGATTGCTGGCTTTTTGTTTATGTATTCGAGATAATTGTTGTTCTTTGGTTATTCTTTTTTGTTTATTGTAGTCCGATTTTTGGGACTTTTTTTTTATTTGAGACTATGTATATTGAGGAACTGAAGGAGGAAGGAGAGTTACAGAGTGGGGAAGAGGGAAATTCGAATGACTACCACAACAGCTGAAAATAGGAACTTATACAAGAATAAGCTGGTGCCTTAGCTTAGTACTCAATATTTGTTAATGCGAATTTACTTATATCATGCAATTTTTGGAGTGTTTTTCCCTTGGTTCTTTATTCTAGTTTCTGGTATTTTTAAATAATTTTTTATGATAATATTAATTCTCTTATTGATGAGATTAACGGTGATTGATTGGTTTCTAATAGAACACACACTTGCAATCCAAAATTCTTCAATCAGAAAGTACCCCAAAAACTAATCTTGGTATGACCAATTCTTTTTGCGTTTTTTTTCAAAATTCCTTCTCTGTACTAGTTATAAAAGTTTGCAAAATTCTATGATATTTTATGATTGACAGCTCTTGAGAAGATTAGAAGGCCTTTATATGAAAAACATCCCATGAGCAAATTTGCATGGACAATAGCTGAAGACACTGATACTGTAAGCATCCTTGTTAATCAGACCGTTGAAATAAAATTCCATCAACTCCACTGACTGACAGTTTAGAATTTTGAATGATTTCAAATCTTTTATGGTTTTTATATGAAGATGGAATGGTACAACATCTGCCAAGATGCCTTAAGAAAAGTCAATGAATCGTATCAAGGAAAAGAGACTGCTGACATCATTCAAAACAAAGTTTTGCAGGTACATATTATTCACATGTTTTTGTGGCTAAAATATCTTAGGCAATAGGTAAGAAGAGATTGTATTCATCTTCACTTAACCCTTTGTCTTGTCTTAGAAATTGGTGGGATATTTTAAATCTTTTTTCGAACACTTCTGGTTTGATGTTGAATGTGACTAAAATCTTGCTTATTGGTTTCAATATGAGTAAGGAGGGAGTTGAAGAATGGGCATAGGAGTTTCAATGTAAAATAGGAGCATTTCTGATTACGTTGAGAAATTTCCACGTCTGGTCGTACTTATGTTTGTACTTATTTTTTTTCCTAGCTTGAATTTCTTTTTAATTTATTAACATGAATCTATTAGGCTCGAGAGGAGGATGAGGAGATTAAATTCAATTGTGCTAATTACCAGCTTGAAATAATGAGATGCTTGAGAGAACTCAATGTTAACAACACTATTGGATGGTAAGCTTAGTTTTATGATACTGCATATTTATGGAAAACTTTAGCACTTTTACATATATGATCACAGGCTTGGTGATAGTGATTTAAGGGGCATGATTGTGATTTGTATCAAACTGTTATGTGGTCATAAATGGAATAAATAATTTGTCTGTAGTTTGATTATGAGATCTAATTGAAATTTTTTTGCACCTTGACTTCTACTTTTATTTTTTTAACTAACTCAGATTCCTGTTTATAGGATTGGAACATCAAATATTGGAGGCTGGAGCAGATATTTGGGTTACTTCATCTTACCAGGTTTGCAATGCCAATGGATTAATCTTTCTTTGTTTTTGTACTTTTCACTCTGTGATGGCTTTGAGGTGTCTTTCTTTTAAATGTTCTACTGTTGCTTTTTTAAAACTTGATGGTTTAAATCGAATATTTTCATGACAATGAATAGAATAAGTGAGGATCAAACTGATCACTCCTCTTGAATTGAAATCAAAAAGTTCAAAATGAGTGTTTCTGCTGATGGCTCAGAGTATAGGTGAATTTGAAACAATTAGTTACAAGGAGTTTGTAAATATTTGGTATTGACAATCTGATCTAAACCTATTTCCACCTCCCCTTTACATTGTTATCATCAACATAGCTGATCATTAATCCTATATTTGTTGTTGTGATGTTTTCTACTTCTTGTAGATTGGCTCTGCTATTGGTGGTACTTATTTTAGCTCATGAATTGGAGGTAGTAGAGGATGCAGAATGCAAGTTTATTTGAAGCCAAGTTTCATTCAAGGTCATTGAGTTCGGTTGATAGAAGTAATGTTTTGTATATGACAATATCGAACAAATATGTAAAGTTTTCGAAATGTTGATACATATATGGTAAAATGTTAATATATGTTAAAGTTTTGGAATTGTTCTAGTGCATATTTATGTTTGAGTTTTCAAACTATATTTGATGTATATTTGTCGTTTAAATGTAGTTGAATTCTTGGACCAATGAGAGCATAATATAGGAACTAATAAATAAATTACAATTAAAAAAATGAAAAATTGCTTGACGGTTCTGAAATGTCATGAACAATAAATTTCTTGACGGTTTGCAAATGTCATAAACAACGAAATTCTTGACGGTTCCAAAATGTCATAAACAATCACTTTCTTGACGGTTATTAAATGTCATGAAAATGCACTCTTGACGGTTTTAAAATGTCATGAATATTCATATTGTTGACGGTTTTTGTCATTCATAGTCACATTCTTGACGGTTCTAAACTGTCATTAAAACTTATAATCTTGACGGTTCTAAACTGTCATGAATAATTGAATACTTGACGGTTATAAACTGTCAACGTTAACAGTTCTTGACGTTTTTTACAACTGTCAAGAAAATTGCCTTTCTTGACACTGGATTCAATGACGGTTTTGAAACCGTCAAGAATAATCATTCTTGACAGTTTAAAACCGTCAAGAGAGGTAGTTTCTGTAGTAGTGATAACTCTTTACCTCCATGTGATTCCTTGTCTTGAAGGAAAGATGACCAAAAGATCTTTTACTGGAAAAAGTCTTAGAGCCAAAACACCTTTAGAGCTCGTACATTCGGACCTCTGTGGACCAATGAATGTCAAAGTTCGGGGAGGATATGAATATTTCATTAGTTTTATTGATGATTATTCAAGGTATGGTCATGTTTACCTAATTCAGAACAAGTCTGATTCTTTTGAAAAATCTGATTCTTTTGAAAACTTCAAAGAACATAAGGTTGAAGTTGAAAATAAATCAGGTAAAACAATAAAGACACTTTGATCAGATCGAGGTGGAGAGTATATGGACTTGCGATTCCAGGACTATTTGATAGAACATGGAATCCAATCACAACTCTCTGCACCTAGTACACCTCAGCAAAATGATGTATCAGAAAGAAGAAACCAAACTTTGTTGGACATGGTTCGCTCTATGATGAGTTTTGCTCAGTTGCCAGATTCTTTTTGGGGATACGCTTTAGAAACAGTTATCTATATTTTAAACAACGTTCCCTCTAAAATTGTTTCTGAAACACCTTATGAGCTATGGAAAAGGTGTAAAGGTAGTTTACGTCACTTTAGAATTTGGGGATGTCCAGCACTTGCGTTGGTGCAAAACCCTAAAAAGTTGAAACGTCATTAAAAATTATGCCTATTTGTAGGTTATCCAAAAGAATCTAAAGGTGGTTTGTTTTATGACCCTCAAGAAAGTAAAGTATTTGTATCGACAAATGCTACGTTCTTAGAGGAAGACCACATAAGAAATTATCAAACTCGCAGTAAACTAGTATTAAAAGAAATTTCCAAGAATACTACAGATAGACCTAGTTTATCCACTAAAGTAGTTGATAAAACTAGGAGTGTTGGTCAAACACATCTTATCAAGAGTTGGGAGAACCTCGACGTAGTAGGAGGATTGTACGATAACCTGATCACTATTTGGGTTTAAGTGAAGCTCAAATCGTCATACCTGATAATGGAATAGAGGATCCATTGACCTATAAACAAGCAATGAATGATGTGGACTGTGACCAATGGATCAAAGCCATGGACCTCGAAATGAAATCTATATATTCCAATTCTGTCTGGACTCTAGTAGATCAACCAAATGATGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCAAGCTGGTAAAGTACAGACTTTCAAAGCTCGACTAGTGGCAAAAGGTTATACACAAAAGGAGGGAGTGGATTATGAAGAAACTTTCTCTCATGTTGCCATGCTGAAGTCGATTAGAATACTCTTATCCATCGCTACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGATAGCTTTGAAATCTTGAGGAGAGTATCTATATGGTCCAACCAGAGGGGTCTATATAAAAGGGTCAAGAACAAATGGTTTGTAAGCTTCGAAAATCCATATATGGATTAAAACAAGCATCTAGATCCTAGAATATAAGGTTTGATAATGTGATCAAATCTTATAGTTTTGAACAAAATGTTGATGAACCTTGTGTTTCGATCATCAATTCCACTGTAGCATTCTTAATTCTGTATGTAGATGACATTCTACACATTGGGAATGATGTAGGTCATCTAACTAATATTAAGAGATGGCTAGCTACGCAATTCCGAATAAAAGATTTGGGAAATGCTCAATACGTTCTTGGAATCCAAATAGTTCGAAACCGAAAAAACAAAACACAAGCCATATCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTTTAAAAAAGGGTTGTTGTCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATAAGTAACATTCCCTATGCTTCTGTTTTTGGGAGCCTGATGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTCAGTAGGGATGGTTAGTAGATATCAGTCAAATCCTGAACGTGATCATTGAACAGCCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTAAATACTTGTGTATGGTTCTAAGGATCTGATCCTTACTAGATACACAGACTCTGATTTTCAATCAGATAAAGATGCTAGAAAGTCTACATCGCACTAGAAGAAATCTGGCCTTTAATGTCGGTTAAAAAAATGAACACGGATCTTTAATGTCGGTTTTTAAAATGCGGATCTTTAATGTCGGTTTTAAACCGACATCAAAGATGAAGCTTTAATGTCGGTTTAAAACTGACATTAAAGATCCGTATTTTAAAAACCGACATTAAAGGTACATTCCAAACCTATATCCAAACACCCCAAAAAGGTAACCTATCAAACCTAACTCCCAATGACCCCACATATAAATACCTTCTATAGGGTTTTTTCATTTTCATTGCAGCTTCTTCAATAACACTAATCATGGTTGAGTGAGGAGGAGATCGCAGCGACTTTGGCAGAGGCTTCGGTGGTAGAGATCGTGGTGGCGATTGTGGATGTGGATGCCCTCGTGTTGGCCGCCATAACGAAGAGGACTGTTCTTCTATCGGCATTGTGTAGTTTCTCGCTTGAACATGGTGAGTTTTTGCTTAGACATGATCTGAAAAACGACGCGGTGGAAGAACAAGTGGAAATTTGGACGGATTTTGATTTTCTTTCTGAGTTTGGATCTTCAAAGACGGTGGTTGATGATACAGAGTTTTCTTATAATCCATGGCATGACAAGTAAGATTCACTATTTATATAATTTACATATGCTTATTCAATATTTTCCAGAATTATTTATTTATTTTAAGAGAACATAGGAAGTTTTTATCAATGTAAATTAAATAACCTAAATTTGAAGTATATTTTATAATTATCTATAAAATTATCATAAGATGGTCAACCCAAAGTAGCATTTCTTTGTTGTTGCAAACCCTTGAAATTCTTGCTCGTATTTTCTTGCAATTATAGGGTTCTATGTTCTTTGGTTATATATACCTGGACCATTTAACAAATACCCTTCATCTATGTTTCACAAATCTCAATTCATACAAGATTGTTATTTGATTTCAACCTTATATCACTATCCTTAAACTATATTATACTTGATTTAGACGGTCTTCTATTCTTTTTGTCCATACTTTCTAAGAACATTCTTATATCACCGTCCTTAAATTATCATTCATTAGAATTTAGAGGTCAGAAGGTCATTAGTTTCATAAACAATAGAAGTTAAAAATTCCTCTATCTTTATTAAAGAAATATTATTTCATAAAATTAGTATACTGTTGGAAAAGGACTTATGTTTATCAAATTAGTGTACTTATGTTTATCAATAATAACCTAGACCATTATGCTAAGTATTCGAACTAGACACTTATCACATTTGGATTTTCGCCTTGTTGAATCTGTTCTCGAATGATTTGGTTTGCTTTGAACCTTTTTTTGTGTTAAATAAGCTGGTTTCTATTTTTAACATTTTTGTTTTGTTTGTGATGTTTACTGAATTATGTAGGTTTCGGCTGCGAGGACTTGCAATTGTATTTTTGTATATATTTTTTGCTTCAGCAAAGGCAGCGTGACATTGAGTTTAGGAAATCTTATAATGAACAGAGATAGAGGTAACAACATTTTCTAACGTTAATGTATTGTAGGACATTACCGAAGGCTTCAATTATGAGTAAATTTGTATGACTATGCTAAGAAATTTATGAAATTATGCTTTGTTTGGTTATCTTATGGATATTTAGTATGTCAGATATCGAAAAGTGATGCACTTGATGCATTGGGTTTGGTTCGCTCCTGTGGTAGGCGAATGTTGATGTTGACCTTATTGAGAAGCTTTTTAATTACAATACCTTATTGAAAAAGTATCCAAAAATAGATATGACTAATATTGCATTATACGACCAATTTTTGTTGCAATCCTTTAAGAAACAAACATCATTAATAAGCTTTATGATTTATGTATCACTTACCTATTCAAAGTTTATCATCAAACACATTTGTACAATTTGGTACTGGCCTTCTAAACTTGTACAGGCATAAACACCTAGTGGCTAACATTGTATTACAGATTTTGGCAAGCCAGTTGATGTAGATAACATTTTAGAGATTTGTGGATGTTATATTGCAGTTTGAACCTATTAAGTTTTTACTATTCTCGTGTGCAAAATGTATATAAGTGCCTCAATTTATTAGTTCATATCATGCTAACGATTATATCCTAACTAGCTACGTTTTCTTTCAACTTATGCTCTATCTTTTCTGAAGGAAAAAGGAATACTTGTGTGATTGTTATCTTGTTAATATGTTTTTCTAGAGTTGTGACTTTAGCAATATTTTTCTTCTCTCAGCCTTATACTCCCTCAACAATCATCTGCACAATGAGGTTCACAAGCTTGCTGCAAAATTCAAGAAAATTTATGTGTGGTAACAAATCCTTTGCTTTATTAATTAGTAATCAAAGGAGGAAGGAAACCATAGAATAGTATCAACTTATTTGTGCACACAATGGTTTCACTTTGGTTGATTTAGTGACTTATAATAGTAGACATAATTTAGCAAATGGTGAAGACAACTTATTTATGCATCTCATGAGATCATCGTTGATGTGGTATTAAGATCATCTCACAAGTTCTTTACTTGTTAGTGAATTATTACCTAGTTGTGGCCATTTCCAATACGTATTCCTACCACATAGGCCAAGAAAAACCAATCCAAAATTCTACTTTTGGCCATCAATTATTTGCTCTTTAATTAGCTTTTTTCTACACTGGGAAGTAGATTACGCTCATTCTGAGAATGGGAAGATTGGATTTTTGTTTGTAAAAGTTGGATTGGAGTATTCTTTTTCAGGTTATAGATAGTGAACATATGAGAAATTAGATATTGATTATAGCTATATTGGTTATGGAGTTGTTTGTTGTTTTGCTTTATAATGTGGTTATGTTGTTCAAATCAGATTCTTGTTTTTGATGGCTCTATTGTAATAATTGTTGTTTAGCCATAAGAACACCCAAGAGATATATTGTTCTCTTATCTGTGTAATCAAGCAAATCACAAGCACCAAATAATATGTAGGAAATTGATGGTTCAAGTTCAAACTTCAGTCAACTGTTTGGAATTGAACGTATTATACAAAAAAGTTTATCTTACCATGTTTCCAAATTTTTTTTTTAGGAAGACTTGAATGAACAAGTTCCAATATTATCTTGGTAAGACTGTTATGTGGTTGCACTTGGTTTAGAAATTTTTTTTGGTGGTGTTGTTTCAAATACTGTTTAACAATTTAGAAAAGCGGGAAGTTTAATTATGTGAGGAAAAAACTGTTTTGGTGGTGATTTTATGTTTGGTTCTTTTGTTTGGCAATGAAAATACTATTATGGTGGTGACTATTTCTCAAAATTTGACTTGGTTTTTGAAAAACATGAATAGAAAGTTGATAACAAAACAAGAAATGTAGATGTGGTCACTTATTAGATGCTTGGATCTTTTTATGCACTTATATTTTTCAAGTAACTAAAAGAGAATTTGTTCATGGGAAGTTAACAAAATCTTGCCTTTGTTTGGAACTATCATATCATCCTCATTTTGATATTTTGATATTTCTACTAGCAACTAGGTCATAACATTGTTACTTATCAATTCAACCATCTTGATGTCTTTTACAGGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGTCAGACCCTCA

mRNA sequence

ATGACCTTCATTCATTCAGCGGCTGCAGCAGCTACATATGCCTTGACACTGGAGATTTGGTTTACCTTTTCTAGTATGGATATGATTTTGGTTTCAGGAGAACATTTAATTGCTCCATGCCATTGCAAAGGCACTCAAAAGAGGAAGGAGAGTTACAGAGTGGGGAAGAGGGAAATTCGAATGACTACCACAACAGCTGAAAATAGGAACTTATACAAGAATAAGCTGAACACACACTTGCAATCCAAAATTCTTCAATCAGAAAGTACCCCAAAAACTAATCTTGCTCTTGAGAAGATTAGAAGGCCTTTATATGAAAAACATCCCATGAGCAAATTTGCATGGACAATAGCTGAAGACACTGATACTATGGAATGGTACAACATCTGCCAAGATGCCTTAAGAAAAGTCAATGAATCGTATCAAGGAAAAGAGACTGCTGACATCATTCAAAACAAAGTTTTGCAGGCTCGAGAGGAGGATGAGGAGATTAAATTCAATTGTGCTAATTACCAGCTTGAAATAATGAGATGCTTGAGAGAACTCAATGTTAACAACACTATTGGATGGCTTGGTGATAGTGATTTAAGGGGCATGATTGTGATTTGTATCAAACTATTCCTGTTTATAGGATTGGAACATCAAATATTGGAGGCTGGAGCAGATATGTTTGCAATGCCAATGGATTAATCTTTCTTTGTTTTTGTACTTTTCACTCTGTGATGGCTTTGAGGTATGGTCATGTTTACCTAATTCAGAACAAGTCTGATTCTTTTGAAAAATCTGATTCTTTTGAAAACTTCAAAGAACATAAGGTTGAAGTTGAAAATAAATCAGATCGAGGTGGAGAGTATATGGACTTGCGATTCCAGGACTATTTGATAGAACATGGAATCCAATCACAACTCTCTGCACCTAGTACACCTCAGCAAAATGATGTATCAGAAAGAAGAAACCAAACTTTGTTGGACATGGTTCGCTCTATGATGAGTTTTGCTCAGTTGCCAGATTCTTTTTGGGGATACGCTTTAGAAACAGTTATCTATATTTTAAACAACGTTCCCTCTAAAATTGTTTCTGAAACACCTTATGAGCTATGGAAAAGGTGTAAAGGTAGTTTACGTCACTTTAGAATTTGGGGATGTCCAGCACTTGCGTTGGTGCAAAACCCTAAAAAGTTGAAACGTTATCCAAAAGAATCTAAAGGTGGTTTGTTTTATGACCCTCAAGAAAGTAAAGTATTTGTATCGACAAATGCTACGTTCTTAGAGGAAGACCACATAAGAAATTATCAAACTCGCAGTAAACTAGTATTAAAAGAAATTTCCAAGAATACTACAGATAGACCTAGTTTATCCACTAAAGTAGTTGATAAAACTAGGAGTGTTGGTCAAACACATCTTATCAAGAGTTGGGAGAACCTCGACGTAGTAGGAGGATTTGAAGCTCAAATCGTCATACCTGATAATGGAATAGAGGATCCATTGACCTATAAACAAGCAATGAATGATGTGGACTGTGACCAATGGATCAAAGCCATGGACCTCGAAATGAAATCTATATATTCCAATTCTGTCTGGACTCTAGTAGATCAACCAAATGATGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCAAGCTGGTAAAGTACAGACTTTCAAAGCTCGACTAGTGGCAAAAGATGGATGTCAAGATAGCTTTGAAATCTTGAGGAGAGTATCTATATGGTCCAACCAGAGGGATGACATTCTACACATTGGGAATGATGTAGGTCATCTAACTAATATTAAGAGATGGCTAGCTACGCAATTCCGAATAAAAGATTTGGGAAATGCTCAATACGTTCTTGGAATCCAAATAGTTCGAAACCGAAAAAACAAAACACAAGCCATATCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTTTAAAAAAGGGTTGTTGTCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATAAGTAACATTCCCTATGCTTCTGTTTTTGGGAGCCTGATGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTCAGTAGGGATGGAGGAGATCGCAGCGACTTTGGCAGAGGCTTCGGTGGTAGAGATCGTGGTGGCGATTGTGGATGTGGATGCCCTCGTGTTGGCCGCCATAACGAAGAGGACTGTTCTTCTATCGGCATTGTGTAGTTTCTCGCTTGAACATGGTGAGTTTTTGCTTAGACATGATCTGAAAAACGACGCGGTGGAAGAACAAGTGGAAATTTGGACGGATTTTGATTTTCTTTCTGAGTTTGGATCTTCAAAGACGGTGGTTGATGATACAGAGTTTTCTTATAATCCATGGCATGACAACAAAGGCAGCGTGACATTGAGTTTAGGAAATCTTATAATGAACAGAGATAGAGTATGTCAGATATCGAAAAGTGATGCACTTGATGCATTGGGTTTGGTTCGCTCCTGTGGTAGGCGAATGTTGATGTTGACCTTATTGAGAAGCTTTTTAATTACAATACCTTATTGAAAAAGTATCCAAAAATAGATATGACTAATATTGCATTATACGACCAATTTTTGTTGCAATCCTTTAAGAAACAAACATCATTAATAAGCTTTATGATTTATAGTTGTGACTTTAGCAATATTTTTCTTCTCTCAGCCTTATACTCCCTCAACAATCATCTGCACAATGAGGTTCACAAGCTTGCTGCAAAATTCAAGAAAATTTATGGAGTTATCACTAAACAAATGACTGCAATAGAAGAAATGGTTGCAAGTGAGTACAATTAGTCAGACCCTCA

Coding sequence (CDS)

ATGGCTTTGAGGTATGGTCATGTTTACCTAATTCAGAACAAGTCTGATTCTTTTGAAAAATCTGATTCTTTTGAAAACTTCAAAGAACATAAGGTTGAAGTTGAAAATAAATCAGATCGAGGTGGAGAGTATATGGACTTGCGATTCCAGGACTATTTGATAGAACATGGAATCCAATCACAACTCTCTGCACCTAGTACACCTCAGCAAAATGATGTATCAGAAAGAAGAAACCAAACTTTGTTGGACATGGTTCGCTCTATGATGAGTTTTGCTCAGTTGCCAGATTCTTTTTGGGGATACGCTTTAGAAACAGTTATCTATATTTTAAACAACGTTCCCTCTAAAATTGTTTCTGAAACACCTTATGAGCTATGGAAAAGGTGTAAAGGTAGTTTACGTCACTTTAGAATTTGGGGATGTCCAGCACTTGCGTTGGTGCAAAACCCTAAAAAGTTGAAACGTTATCCAAAAGAATCTAAAGGTGGTTTGTTTTATGACCCTCAAGAAAGTAAAGTATTTGTATCGACAAATGCTACGTTCTTAGAGGAAGACCACATAAGAAATTATCAAACTCGCAGTAAACTAGTATTAAAAGAAATTTCCAAGAATACTACAGATAGACCTAGTTTATCCACTAAAGTAGTTGATAAAACTAGGAGTGTTGGTCAAACACATCTTATCAAGAGTTGGGAGAACCTCGACGTAGTAGGAGGATTTGAAGCTCAAATCGTCATACCTGATAATGGAATAGAGGATCCATTGACCTATAAACAAGCAATGAATGATGTGGACTGTGACCAATGGATCAAAGCCATGGACCTCGAAATGAAATCTATATATTCCAATTCTGTCTGGACTCTAGTAGATCAACCAAATGATGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCAAGCTGGTAAAGTACAGACTTTCAAAGCTCGACTAGTGGCAAAAGATGGATGTCAAGATAGCTTTGAAATCTTGAGGAGAGTATCTATATGGTCCAACCAGAGGGATGACATTCTACACATTGGGAATGATGTAGGTCATCTAACTAATATTAAGAGATGGCTAGCTACGCAATTCCGAATAAAAGATTTGGGAAATGCTCAATACGTTCTTGGAATCCAAATAGTTCGAAACCGAAAAAACAAAACACAAGCCATATCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTTTAAAAAAGGGTTGTTGTCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTGAGGATATAAGTAACATTCCCTATGCTTCTGTTTTTGGGAGCCTGATGTATGCAATGTTATGTATTAGACCTGACATTTGCTATTCAGTAGGGATGGAGGAGATCGCAGCGACTTTGGCAGAGGCTTCGGTGGTAGAGATCGTGGTGGCGATTGTGGATGTGGATGCCCTCGTGTTGGCCGCCATAACGAAGAGGACTGTTCTTCTATCGGCATTGTGTAGTTTCTCGCTTGAACATGGTGAGTTTTTGCTTAGACATGATCTGAAAAACGACGCGGTGGAAGAACAAGTGGAAATTTGGACGGATTTTGATTTTCTTTCTGAGTTTGGATCTTCAAAGACGGTGGTTGATGATACAGAGTTTTCTTATAATCCATGGCATGACAACAAAGGCAGCGTGACATTGAGTTTAGGAAATCTTATAATGAACAGAGATAGAGTATGTCAGATATCGAAAAGTGATGCACTTGATGCATTGGGTTTGGTTCGCTCCTGTGGTAGGCGAATGTTGATGTTGACCTTATTGAGAAGCTTTTTAATTACAATACCTTATTGA

Protein sequence

MALRYGHVYLIQNKSDSFEKSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHGIQSQLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVSETPYELWKRCKGSLRHFRIWGCPALALVQNPKKLKRYPKESKGGLFYDPQESKVFVSTNATFLEEDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQTHLIKSWENLDVVGGFEAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMDLEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQDSFEILRRVSIWSNQRDDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQTSYIDKMLSRYKMQNFKKGLLSYRYGIHLSKEQCPKTPQEVEDISNIPYASVFGSLMYAMLCIRPDICYSVGMEEIAATLAEASVVEIVVAIVDVDALVLAAITKRTVLLSALCSFSLEHGEFLLRHDLKNDAVEEQVEIWTDFDFLSEFGSSKTVVDDTEFSYNPWHDNKGSVTLSLGNLIMNRDRVCQISKSDALDALGLVRSCGRRMLMLTLLRSFLITIPY

Homology

[Close]

BLAST of MELO3C032112 vs. NCBI nr
Match: KAA0062742.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK22541.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 646.4 bits (1666), Expect = 2.6e-181
Identity = 343/486 (70.58%), Postives = 372/486 (76.54%), Query Frame = 0


Query: 3   LRYGHVYLIQNKSDSFEKSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHGIQSQL 62
           LRY HVYLIQN+ DSFEK      FKE+K +VEN+S                EHGIQSQL
Sbjct: 267 LRYDHVYLIQNEYDSFEK------FKEYKAKVENES----------------EHGIQSQL 326

Query: 63  SAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVSETP 122
           SAPSTPQQN VSERRN+TLLDMVRSM+SFAQL DSF GYALET IYILNNVPSK  SE P
Sbjct: 327 SAPSTPQQNGVSERRNRTLLDMVRSMLSFAQLSDSFLGYALETTIYILNNVPSKSFSERP 386

Query: 123 YELWKRCKGSLRHFRIWGCPALALVQNPKKLKR---------YPKESKGGLFYDPQESKV 182
           +ELWK  KGSL HFRIWGC A  LVQNPKKL+          YPKESKGGLFYDPQE+KV
Sbjct: 387 HELWKGRKGSLHHFRIWGCLAHVLVQNPKKLEHHSKLCLFVGYPKESKGGLFYDPQENKV 446

Query: 183 FVSTNATFLEEDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQTHLIKSWEN 242
           FVSTNATFLEEDHIRN+QTRSKLVL+EIS  +TDRPSL TKVVDKTR++GQTH  +    
Sbjct: 447 FVSTNATFLEEDHIRNHQTRSKLVLEEISMTSTDRPSLCTKVVDKTRNIGQTHHSQELRE 506

Query: 243 LDVVGGF-----------EAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMDLEMKSIYS 302
               G             EAQI+IP++GIEDPLTYKQAMNDVDCDQWIKAMDL+M+SIY 
Sbjct: 507 PRRSGRVVRQPDRYLDLSEAQIIIPNDGIEDPLTYKQAMNDVDCDQWIKAMDLQMESIYC 566

Query: 303 NSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQDSFEILRRVSIWSN 362
           NSVWT VDQPND+KPIG KWIYKRKRDQAGKVQTFKARLVA+                  
Sbjct: 567 NSVWTRVDQPNDIKPIGFKWIYKRKRDQAGKVQTFKARLVAE------------------ 626

Query: 363 QRDDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQTSYID 422
                   GN+VGHL +IK WLATQF++KDLGNAQYVLGIQIVRN+KNKT A+SQTSYID
Sbjct: 627 --------GNEVGHLNDIKEWLATQFQMKDLGNAQYVLGIQIVRNQKNKTLAMSQTSYID 686

Query: 423 KMLSRYKMQNFKKGLLSYRYGIHLSKEQCPKTPQEVEDISNIPYASVFGSLMYAMLCIRP 469
           KMLSRYKMQN KKGLL Y YGIHLSKEQCPKTP EVED+SNIPYA   GSLMYAMLC RP
Sbjct: 687 KMLSRYKMQNSKKGLLPYIYGIHLSKEQCPKTPHEVEDMSNIPYAFAVGSLMYAMLCTRP 704

[Close]

BLAST of MELO3C032112 vs. NCBI nr
Match: TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 641.7 bits (1654), Expect = 6.4e-180
Identity = 350/552 (63.41%), Postives = 379/552 (68.66%), Query Frame = 0


Query: 45  MDLRFQDYLIEHGIQSQLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALE 104
           MDLRFQDYLIEHGIQSQ SAPS PQQN V +RRN+ LLDMVRSMMSF QLPDSFW YALE
Sbjct: 1   MDLRFQDYLIEHGIQSQFSAPSMPQQNGVLKRRNRILLDMVRSMMSFTQLPDSFWRYALE 60

Query: 105 TVIYILNNVPSKIVSETPYELWKRCKGSLRHFRIWGCPALALVQNPKKLKR--------- 164
           T IYILNNVPSK VSETPYELWK  KGSLRHFRIWGCPA   VQNPKKL+R         
Sbjct: 61  TTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVFVQNPKKLERRSKLCLFVG 120

Query: 165 YPKESKGGLFYDPQESKVFVSTNATFLEEDHIRNYQTRSKLVLKEISKNTTDRPSLSTKV 224
           YPKESKGGLFYDPQE+KVFVSTNATFLEEDHIRN+QTRSKLVL+EISKNTTDRPS  TKV
Sbjct: 121 YPKESKGGLFYDPQENKVFVSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSFTKV 180

Query: 225 VDKTRSVGQTHLIKSW-----------ENLDVVGGFEAQIVIPDNGIEDPLTYKQAMNDV 284
           VDKTR++GQTH  +             ++   +G  EAQI+IPD+GIEDPLTYK AMNDV
Sbjct: 181 VDKTRNIGQTHHFQELGKPRRSGRVVRQSDRYLGLSEAQIIIPDDGIEDPLTYKHAMNDV 240

Query: 285 DCDQWIKAMDLEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK 344
           D DQWIKAMDLEM+S+YSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK
Sbjct: 241 DRDQWIKAMDLEMESMYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK 300

Query: 345 DGCQD---------SFEILRRV------------SIWS---------------------- 404
              Q          SF +++ +             IW                       
Sbjct: 301 GYTQKEGIDYEEVFSFAMIKSIRILLSIATFYDYEIWQMDVKTTFLNANLEESIYMVQPE 360

Query: 405 ----------------------------NQR----------------------------- 464
                                       N R                             
Sbjct: 361 RFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKSYGLEQNVDEPCVYKRIMNSTVA 420

Query: 465 ------DDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQT 471
                 DDIL IGNDVGHL +IK+WLA QF++KDLGNAQYVLG+QIVRNRKNKT A+SQT
Sbjct: 421 FLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTLAMSQT 480

[Close]

BLAST of MELO3C032112 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 637.5 bits (1643), Expect = 1.2e-178
Identity = 352/603 (58.37%), Postives = 397/603 (65.84%), Query Frame = 0


Query: 4    RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVEN---------KSDRGGEYMDLRFQDYLI 63
            RYGHVYL+ +KS+SFEK      FKE+K EVEN         +SDRGGEYMD +FQDYLI
Sbjct: 532  RYGHVYLLHHKSESFEK------FKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLI 591

Query: 64   EHGIQSQLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVP 123
            E GIQSQLSAPSTPQQN VSERRN+TLLDMVRSMMS+AQLPDSFWGYALET I+ILNNVP
Sbjct: 592  EFGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVP 651

Query: 124  SKIVSETPYELWKRCKGSLRHFRIWGCPALALVQNPKKLK---------RYPKESKGGLF 183
            SK V ETPYELWK  K SLR+FRIWGCPA  LVQNPKKL+          YPKES+GGLF
Sbjct: 652  SKSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLF 711

Query: 184  YDPQESKVFVSTNATFLEEDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQT 243
            Y PQE+KVFVSTNATFLEEDH RN+Q RSK+VLKE+ KN TD+PS STKVVDK     Q+
Sbjct: 712  YHPQENKVFVSTNATFLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQS 771

Query: 244  HLIKS-----------WENLDVVGGFEAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMD 303
            H  +             +    +G  E QI+IPD+G+EDPLTYKQAMNDVD DQWIKAM+
Sbjct: 772  HTSQELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMN 831

Query: 304  LEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQ------ 363
            LEM+S+Y NSVWTLVD P+DVKPIGCKWIYKRKRDQAGKVQTFKARLVAK   Q      
Sbjct: 832  LEMESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDY 891

Query: 364  ----------DSFEILRRVSIWSNQR---------------------------------- 423
                       S  IL  ++ + N                                    
Sbjct: 892  EETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQ 951

Query: 424  ---------------------------------------------------------DDI 471
                                                                     DDI
Sbjct: 952  KVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDI 1011

[Close]

BLAST of MELO3C032112 vs. NCBI nr
Match: KAA0025729.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 609.4 bits (1570), Expect = 3.5e-170
Identity = 346/550 (62.91%), Postives = 378/550 (68.73%), Query Frame = 0


Query: 4   RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHGIQSQLS 63
           RYGHVYLIQNKSDSFEK      FKE+KVEVEN+S                EHGIQSQL 
Sbjct: 174 RYGHVYLIQNKSDSFEK------FKEYKVEVENES----------------EHGIQSQLF 233

Query: 64  APSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVSETPY 123
            P+ PQQN  SERRN+TLLDMVRSMMSFAQLPDSFW YALET IYILNNVPSK VSETPY
Sbjct: 234 TPNMPQQNGGSERRNRTLLDMVRSMMSFAQLPDSFWEYALETAIYILNNVPSKSVSETPY 293

Query: 124 ELWKRCKGSLRHFRIWGCPALALVQNPKKLKRYPKESKGGLFYDPQESKVFVSTNATFLE 183
           ELWKR KGSL                     RY KES+GGLFYDPQE+KVFVS NATFLE
Sbjct: 294 ELWKRRKGSL---------------------RYSKESRGGLFYDPQETKVFVSKNATFLE 353

Query: 184 EDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQTH----LIKSWENLDVV-- 243
           EDHIRN+QTRSKLVL+EISKN TDRPS STK+VDKTR++GQTH    L +   +  VV  
Sbjct: 354 EDHIRNHQTRSKLVLEEISKNATDRPSSSTKIVDKTRNIGQTHPSQELREPRRSRRVVRQ 413

Query: 244 -----GGFEAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMDLEMKSIYSNSVWTLVDQP 303
                G  +AQI+IPD+GIEDPLTYKQ MNDVDCDQWIKA+DL+M+S+YSNSVWTLVDQ 
Sbjct: 414 PDHYLGLSKAQIIIPDDGIEDPLTYKQTMNDVDCDQWIKAIDLKMESMYSNSVWTLVDQL 473

Query: 304 NDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQD----------------SFEILRR 363
           ++V+PIGC+WIYKRKRDQAGKVQTFKARLVAK   Q+                S  IL  
Sbjct: 474 SEVRPIGCRWIYKRKRDQAGKVQTFKARLVAKGYTQNEGIDYEETFSPVTMIKSIRILLS 533

Query: 364 VS------IW----------------------------------------------SNQR 423
           ++      IW                                              SN  
Sbjct: 534 IATFYDYEIWHMDVKTAFLNGNLEESIYMVQSEGFIQKGQEQKNVDEPCVYKRIINSNVA 593

Query: 424 ------DDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQT 469
                 DDIL IGNDVGHLT+IK WLATQF++ DL NA YV GIQIVRNRKNKT AISQT
Sbjct: 594 FLVLYVDDILLIGNDVGHLTDIKEWLATQFQMNDLENALYVPGIQIVRNRKNKTLAISQT 653

[Close]

BLAST of MELO3C032112 vs. NCBI nr
Match: TYK06159.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 608.6 bits (1568), Expect = 6.0e-170
Identity = 346/550 (62.91%), Postives = 377/550 (68.55%), Query Frame = 0


Query: 4   RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHGIQSQLS 63
           RYGHVYLIQNKSDSFEK      FKE+KVEVEN+S                EHGIQSQL 
Sbjct: 154 RYGHVYLIQNKSDSFEK------FKEYKVEVENES----------------EHGIQSQLF 213

Query: 64  APSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVSETPY 123
            P+ PQQN  SERRN+TLLDMVRSMMSFAQLPDSFW YALET IYILNNVPSK VSETPY
Sbjct: 214 TPNMPQQNGGSERRNRTLLDMVRSMMSFAQLPDSFWEYALETAIYILNNVPSKSVSETPY 273

Query: 124 ELWKRCKGSLRHFRIWGCPALALVQNPKKLKRYPKESKGGLFYDPQESKVFVSTNATFLE 183
           ELWKR KGSL                     RY KES+GGLFYDPQE+KVFVS NATFLE
Sbjct: 274 ELWKRRKGSL---------------------RYSKESRGGLFYDPQETKVFVSKNATFLE 333

Query: 184 EDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQTH----LIKSWENLDVV-- 243
           EDHIRN+QTRSKLVL+EISKN TDRPS STK+VDKTR++GQTH    L +   +  VV  
Sbjct: 334 EDHIRNHQTRSKLVLEEISKNATDRPSSSTKIVDKTRNIGQTHPSQELREPRRSRRVVRQ 393

Query: 244 -----GGFEAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMDLEMKSIYSNSVWTLVDQP 303
                G  +AQI+IPD+GIEDPLTYKQ MNDVDCDQWIKA+DL+M+S+YSNSVWTLVDQ 
Sbjct: 394 PDHYLGLSKAQIIIPDDGIEDPLTYKQTMNDVDCDQWIKAIDLKMESMYSNSVWTLVDQL 453

Query: 304 NDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQ----------------DSFEILRR 363
           ++V+PIGC+WIYKRKRDQAGKVQTFKARLVAK   Q                 S  IL  
Sbjct: 454 SEVRPIGCRWIYKRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVTMIKSIRILLS 513

Query: 364 VS------IW----------------------------------------------SNQR 423
           ++      IW                                              SN  
Sbjct: 514 IATFYDYEIWHMDVKTAFLNGNLEESIYMVQSEGFIQKGQEQKNVDEPCVYKRIINSNVA 573

Query: 424 ------DDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQT 469
                 DDIL IGNDVGHLT+IK WLATQF++ DL NA YV GIQIVRNRKNKT AISQT
Sbjct: 574 FLVLYVDDILLIGNDVGHLTDIKEWLATQFQMNDLENALYVPGIQIVRNRKNKTLAISQT 633

[Close]

BLAST of MELO3C032112 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.1e-56
Identity = 170/624 (27.24%), Postives = 268/624 (42.95%), Query Frame = 0


Query: 8    VYLIQNKSDSFEKSDSFENFKEHKVEVENK---SDRGGEYMDLRFQDYLIEHGIQSQLSA 67
            VY+++ K   F+    F    E +   + K   SD GGEY    F++Y   HGI+ + + 
Sbjct: 516  VYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTV 575

Query: 68   PSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPS-KIVSETPY 127
            P TPQ N V+ER N+T+++ VRSM+  A+LP SFWG A++T  Y++N  PS  +  E P 
Sbjct: 576  PGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPE 635

Query: 128  ELWKRCKGSLRHFRIWGCPALALVQNPKKLK-----------RYPKESKGGLFYDPQESK 187
             +W   + S  H +++GC A A V   ++ K            Y  E  G   +DP + K
Sbjct: 636  RVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKK 695

Query: 188  VFVSTNATFLEEDHIRNYQTRSKLVLKEISKN------TTDRPSLSTKVVDKTRSVGQT- 247
            V  S +  F  E  +R     S+ V   I  N      T++ P+ +    D+    G+  
Sbjct: 696  VIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQP 755

Query: 248  -HLIKSWENLDVVGGFEAQIVIPDNGIE------------------------------DP 307
              +I+  E LD   G E ++  P  G E                              +P
Sbjct: 756  GEVIEQGEQLD--EGVE-EVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREP 815

Query: 308  LTYKQAMNDVDCDQWIKAMDLEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKV 367
             + K+ ++  + +Q +KAM  EM+S+  N  + LV+ P   +P+ CKW++K K+D   K+
Sbjct: 816  ESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKL 875

Query: 368  QTFKARLVAKDGCQ---------------------------------------------- 427
              +KARLV K   Q                                              
Sbjct: 876  VRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGD 935

Query: 428  ----------DSFEI-------------------------LRRVSIWSNQR--------- 471
                      + FE+                         ++  S   +Q          
Sbjct: 936  LEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPC 995

[Close]

BLAST of MELO3C032112 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 104.4 bits (259), Expect = 4.8e-21
Identity = 71/234 (30.34%), Postives = 123/234 (52.56%), Query Frame = 0


Query: 5   YGHVYLIQNKSDSFE-------KSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHG 64
           Y   YLI+ KSD F        KS++  N K   + ++N    G EY+    + + ++ G
Sbjct: 513 YCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDN----GREYLSNEMRQFCVKKG 572

Query: 65  IQSQLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKI 124
           I   L+ P TPQ N VSER  +T+ +  R+M+S A+L  SFWG A+ T  Y++N +PS+ 
Sbjct: 573 ISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRA 632

Query: 125 V---SETPYELWKRCKGSLRHFRIWGCPALALVQNPKKLKRYPKESKGGLF--YDPQESK 184
           +   S+TPYE+W   K  L+H R++G      ++N  K  ++  +S   +F  Y+P   K
Sbjct: 633 LVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKN--KQGKFDDKSFKSIFVGYEPNGFK 692

Query: 185 VFVSTNATFL--------EEDHIRNYQTRSKLVLKEISKNTTDR--PSLSTKVV 217
           ++ + N  F+        E + + +   + + V  + SK + ++  P+ S K++
Sbjct: 693 LWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKII 740

[Close]

BLAST of MELO3C032112 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-13
Identity = 41/142 (28.87%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 4   RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVE---NKSDRGGEYMDLRFQDYLIEHGIQS 63
           RY  +Y ++ KS   +    F++  E++ +       SD GGE++ LR  DYL +HGI  
Sbjct: 533 RYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISH 592

Query: 64  QLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVS- 123
             S P TP+ N +SER+++ +++M  +++S A +P ++W YA    +Y++N +P+ ++  
Sbjct: 593 FTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQL 652

Query: 124 ETPYELWKRCKGSLRHFRIWGC 142
           ++P++       +    +++GC
Sbjct: 653 QSPFQKLFGQPPNYEKLKVFGC 672

[Close]

BLAST of MELO3C032112 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.8e-13
Identity = 41/142 (28.87%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 4   RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVE---NKSDRGGEYMDLRFQDYLIEHGIQS 63
           RY  +Y ++ KS   E   +F+N  E++ +       SD GGE++ L   +Y  +HGI  
Sbjct: 554 RYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISH 613

Query: 64  QLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVS- 123
             S P TP+ N +SER+++ +++   +++S A +P ++W YA    +Y++N +P+ ++  
Sbjct: 614 LTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQL 673

Query: 124 ETPYELWKRCKGSLRHFRIWGC 142
           E+P++       +    R++GC
Sbjct: 674 ESPFQKLFGTSPNYDKLRVFGC 693

[Close]

BLAST of MELO3C032112 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-05
Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 269 WIKAMDLEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK 325
           W +AM  E+ ++  N  W LV  P +   +GCKW++K K    G +   KARLVAK
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAK 95

[Close]

BLAST of MELO3C032112 vs. ExPASy TrEMBL
Match: A0A5D3DFR5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00230 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 1.3e-181
Identity = 343/486 (70.58%), Postives = 372/486 (76.54%), Query Frame = 0


Query: 3   LRYGHVYLIQNKSDSFEKSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHGIQSQL 62
           LRY HVYLIQN+ DSFEK      FKE+K +VEN+S                EHGIQSQL
Sbjct: 267 LRYDHVYLIQNEYDSFEK------FKEYKAKVENES----------------EHGIQSQL 326

Query: 63  SAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVSETP 122
           SAPSTPQQN VSERRN+TLLDMVRSM+SFAQL DSF GYALET IYILNNVPSK  SE P
Sbjct: 327 SAPSTPQQNGVSERRNRTLLDMVRSMLSFAQLSDSFLGYALETTIYILNNVPSKSFSERP 386

Query: 123 YELWKRCKGSLRHFRIWGCPALALVQNPKKLKR---------YPKESKGGLFYDPQESKV 182
           +ELWK  KGSL HFRIWGC A  LVQNPKKL+          YPKESKGGLFYDPQE+KV
Sbjct: 387 HELWKGRKGSLHHFRIWGCLAHVLVQNPKKLEHHSKLCLFVGYPKESKGGLFYDPQENKV 446

Query: 183 FVSTNATFLEEDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQTHLIKSWEN 242
           FVSTNATFLEEDHIRN+QTRSKLVL+EIS  +TDRPSL TKVVDKTR++GQTH  +    
Sbjct: 447 FVSTNATFLEEDHIRNHQTRSKLVLEEISMTSTDRPSLCTKVVDKTRNIGQTHHSQELRE 506

Query: 243 LDVVGGF-----------EAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMDLEMKSIYS 302
               G             EAQI+IP++GIEDPLTYKQAMNDVDCDQWIKAMDL+M+SIY 
Sbjct: 507 PRRSGRVVRQPDRYLDLSEAQIIIPNDGIEDPLTYKQAMNDVDCDQWIKAMDLQMESIYC 566

Query: 303 NSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQDSFEILRRVSIWSN 362
           NSVWT VDQPND+KPIG KWIYKRKRDQAGKVQTFKARLVA+                  
Sbjct: 567 NSVWTRVDQPNDIKPIGFKWIYKRKRDQAGKVQTFKARLVAE------------------ 626

Query: 363 QRDDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQTSYID 422
                   GN+VGHL +IK WLATQF++KDLGNAQYVLGIQIVRN+KNKT A+SQTSYID
Sbjct: 627 --------GNEVGHLNDIKEWLATQFQMKDLGNAQYVLGIQIVRNQKNKTLAMSQTSYID 686

Query: 423 KMLSRYKMQNFKKGLLSYRYGIHLSKEQCPKTPQEVEDISNIPYASVFGSLMYAMLCIRP 469
           KMLSRYKMQN KKGLL Y YGIHLSKEQCPKTP EVED+SNIPYA   GSLMYAMLC RP
Sbjct: 687 KMLSRYKMQNSKKGLLPYIYGIHLSKEQCPKTPHEVEDMSNIPYAFAVGSLMYAMLCTRP 704

[Close]

BLAST of MELO3C032112 vs. ExPASy TrEMBL
Match: A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 3.1e-180
Identity = 350/552 (63.41%), Postives = 379/552 (68.66%), Query Frame = 0


Query: 45  MDLRFQDYLIEHGIQSQLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALE 104
           MDLRFQDYLIEHGIQSQ SAPS PQQN V +RRN+ LLDMVRSMMSF QLPDSFW YALE
Sbjct: 1   MDLRFQDYLIEHGIQSQFSAPSMPQQNGVLKRRNRILLDMVRSMMSFTQLPDSFWRYALE 60

Query: 105 TVIYILNNVPSKIVSETPYELWKRCKGSLRHFRIWGCPALALVQNPKKLKR--------- 164
           T IYILNNVPSK VSETPYELWK  KGSLRHFRIWGCPA   VQNPKKL+R         
Sbjct: 61  TTIYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVFVQNPKKLERRSKLCLFVG 120

Query: 165 YPKESKGGLFYDPQESKVFVSTNATFLEEDHIRNYQTRSKLVLKEISKNTTDRPSLSTKV 224
           YPKESKGGLFYDPQE+KVFVSTNATFLEEDHIRN+QTRSKLVL+EISKNTTDRPS  TKV
Sbjct: 121 YPKESKGGLFYDPQENKVFVSTNATFLEEDHIRNHQTRSKLVLEEISKNTTDRPSSFTKV 180

Query: 225 VDKTRSVGQTHLIKSW-----------ENLDVVGGFEAQIVIPDNGIEDPLTYKQAMNDV 284
           VDKTR++GQTH  +             ++   +G  EAQI+IPD+GIEDPLTYK AMNDV
Sbjct: 181 VDKTRNIGQTHHFQELGKPRRSGRVVRQSDRYLGLSEAQIIIPDDGIEDPLTYKHAMNDV 240

Query: 285 DCDQWIKAMDLEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK 344
           D DQWIKAMDLEM+S+YSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK
Sbjct: 241 DRDQWIKAMDLEMESMYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK 300

Query: 345 DGCQD---------SFEILRRV------------SIWS---------------------- 404
              Q          SF +++ +             IW                       
Sbjct: 301 GYTQKEGIDYEEVFSFAMIKSIRILLSIATFYDYEIWQMDVKTTFLNANLEESIYMVQPE 360

Query: 405 ----------------------------NQR----------------------------- 464
                                       N R                             
Sbjct: 361 RFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKSYGLEQNVDEPCVYKRIMNSTVA 420

Query: 465 ------DDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQT 471
                 DDIL IGNDVGHL +IK+WLA QF++KDLGNAQYVLG+QIVRNRKNKT A+SQT
Sbjct: 421 FLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTLAMSQT 480

[Close]

BLAST of MELO3C032112 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 5.8e-179
Identity = 352/603 (58.37%), Postives = 397/603 (65.84%), Query Frame = 0


Query: 4    RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVEN---------KSDRGGEYMDLRFQDYLI 63
            RYGHVYL+ +KS+SFEK      FKE+K EVEN         +SDRGGEYMD +FQDYLI
Sbjct: 532  RYGHVYLLHHKSESFEK------FKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLI 591

Query: 64   EHGIQSQLSAPSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVP 123
            E GIQSQLSAPSTPQQN VSERRN+TLLDMVRSMMS+AQLPDSFWGYALET I+ILNNVP
Sbjct: 592  EFGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVP 651

Query: 124  SKIVSETPYELWKRCKGSLRHFRIWGCPALALVQNPKKLK---------RYPKESKGGLF 183
            SK V ETPYELWK  K SLR+FRIWGCPA  LVQNPKKL+          YPKES+GGLF
Sbjct: 652  SKSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLF 711

Query: 184  YDPQESKVFVSTNATFLEEDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQT 243
            Y PQE+KVFVSTNATFLEEDH RN+Q RSK+VLKE+ KN TD+PS STKVVDK     Q+
Sbjct: 712  YHPQENKVFVSTNATFLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQS 771

Query: 244  HLIKS-----------WENLDVVGGFEAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMD 303
            H  +             +    +G  E QI+IPD+G+EDPLTYKQAMNDVD DQWIKAM+
Sbjct: 772  HTSQELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMN 831

Query: 304  LEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQ------ 363
            LEM+S+Y NSVWTLVD P+DVKPIGCKWIYKRKRDQAGKVQTFKARLVAK   Q      
Sbjct: 832  LEMESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDY 891

Query: 364  ----------DSFEILRRVSIWSNQR---------------------------------- 423
                       S  IL  ++ + N                                    
Sbjct: 892  EETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQ 951

Query: 424  ---------------------------------------------------------DDI 471
                                                                     DDI
Sbjct: 952  KVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDI 1011

[Close]

BLAST of MELO3C032112 vs. ExPASy TrEMBL
Match: A0A5A7SKC9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00100 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.7e-170
Identity = 346/550 (62.91%), Postives = 378/550 (68.73%), Query Frame = 0


Query: 4   RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHGIQSQLS 63
           RYGHVYLIQNKSDSFEK      FKE+KVEVEN+S                EHGIQSQL 
Sbjct: 174 RYGHVYLIQNKSDSFEK------FKEYKVEVENES----------------EHGIQSQLF 233

Query: 64  APSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVSETPY 123
            P+ PQQN  SERRN+TLLDMVRSMMSFAQLPDSFW YALET IYILNNVPSK VSETPY
Sbjct: 234 TPNMPQQNGGSERRNRTLLDMVRSMMSFAQLPDSFWEYALETAIYILNNVPSKSVSETPY 293

Query: 124 ELWKRCKGSLRHFRIWGCPALALVQNPKKLKRYPKESKGGLFYDPQESKVFVSTNATFLE 183
           ELWKR KGSL                     RY KES+GGLFYDPQE+KVFVS NATFLE
Sbjct: 294 ELWKRRKGSL---------------------RYSKESRGGLFYDPQETKVFVSKNATFLE 353

Query: 184 EDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQTH----LIKSWENLDVV-- 243
           EDHIRN+QTRSKLVL+EISKN TDRPS STK+VDKTR++GQTH    L +   +  VV  
Sbjct: 354 EDHIRNHQTRSKLVLEEISKNATDRPSSSTKIVDKTRNIGQTHPSQELREPRRSRRVVRQ 413

Query: 244 -----GGFEAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMDLEMKSIYSNSVWTLVDQP 303
                G  +AQI+IPD+GIEDPLTYKQ MNDVDCDQWIKA+DL+M+S+YSNSVWTLVDQ 
Sbjct: 414 PDHYLGLSKAQIIIPDDGIEDPLTYKQTMNDVDCDQWIKAIDLKMESMYSNSVWTLVDQL 473

Query: 304 NDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQD----------------SFEILRR 363
           ++V+PIGC+WIYKRKRDQAGKVQTFKARLVAK   Q+                S  IL  
Sbjct: 474 SEVRPIGCRWIYKRKRDQAGKVQTFKARLVAKGYTQNEGIDYEETFSPVTMIKSIRILLS 533

Query: 364 VS------IW----------------------------------------------SNQR 423
           ++      IW                                              SN  
Sbjct: 534 IATFYDYEIWHMDVKTAFLNGNLEESIYMVQSEGFIQKGQEQKNVDEPCVYKRIINSNVA 593

Query: 424 ------DDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQT 469
                 DDIL IGNDVGHLT+IK WLATQF++ DL NA YV GIQIVRNRKNKT AISQT
Sbjct: 594 FLVLYVDDILLIGNDVGHLTDIKEWLATQFQMNDLENALYVPGIQIVRNRKNKTLAISQT 653

[Close]

BLAST of MELO3C032112 vs. ExPASy TrEMBL
Match: A0A5D3C701 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00080 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 2.9e-170
Identity = 346/550 (62.91%), Postives = 377/550 (68.55%), Query Frame = 0


Query: 4   RYGHVYLIQNKSDSFEKSDSFENFKEHKVEVENKSDRGGEYMDLRFQDYLIEHGIQSQLS 63
           RYGHVYLIQNKSDSFEK      FKE+KVEVEN+S                EHGIQSQL 
Sbjct: 154 RYGHVYLIQNKSDSFEK------FKEYKVEVENES----------------EHGIQSQLF 213

Query: 64  APSTPQQNDVSERRNQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVSETPY 123
            P+ PQQN  SERRN+TLLDMVRSMMSFAQLPDSFW YALET IYILNNVPSK VSETPY
Sbjct: 214 TPNMPQQNGGSERRNRTLLDMVRSMMSFAQLPDSFWEYALETAIYILNNVPSKSVSETPY 273

Query: 124 ELWKRCKGSLRHFRIWGCPALALVQNPKKLKRYPKESKGGLFYDPQESKVFVSTNATFLE 183
           ELWKR KGSL                     RY KES+GGLFYDPQE+KVFVS NATFLE
Sbjct: 274 ELWKRRKGSL---------------------RYSKESRGGLFYDPQETKVFVSKNATFLE 333

Query: 184 EDHIRNYQTRSKLVLKEISKNTTDRPSLSTKVVDKTRSVGQTH----LIKSWENLDVV-- 243
           EDHIRN+QTRSKLVL+EISKN TDRPS STK+VDKTR++GQTH    L +   +  VV  
Sbjct: 334 EDHIRNHQTRSKLVLEEISKNATDRPSSSTKIVDKTRNIGQTHPSQELREPRRSRRVVRQ 393

Query: 244 -----GGFEAQIVIPDNGIEDPLTYKQAMNDVDCDQWIKAMDLEMKSIYSNSVWTLVDQP 303
                G  +AQI+IPD+GIEDPLTYKQ MNDVDCDQWIKA+DL+M+S+YSNSVWTLVDQ 
Sbjct: 394 PDHYLGLSKAQIIIPDDGIEDPLTYKQTMNDVDCDQWIKAIDLKMESMYSNSVWTLVDQL 453

Query: 304 NDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKDGCQ----------------DSFEILRR 363
           ++V+PIGC+WIYKRKRDQAGKVQTFKARLVAK   Q                 S  IL  
Sbjct: 454 SEVRPIGCRWIYKRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVTMIKSIRILLS 513

Query: 364 VS------IW----------------------------------------------SNQR 423
           ++      IW                                              SN  
Sbjct: 514 IATFYDYEIWHMDVKTAFLNGNLEESIYMVQSEGFIQKGQEQKNVDEPCVYKRIINSNVA 573

Query: 424 ------DDILHIGNDVGHLTNIKRWLATQFRIKDLGNAQYVLGIQIVRNRKNKTQAISQT 469
                 DDIL IGNDVGHLT+IK WLATQF++ DL NA YV GIQIVRNRKNKT AISQT
Sbjct: 574 FLVLYVDDILLIGNDVGHLTDIKEWLATQFQMNDLENALYVPGIQIVRNRKNKTLAISQT 633

[Close]

BLAST of MELO3C032112 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-09
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 252 EDPLTYKQAMNDVDCDQWIKAMDLEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQA 311
           ++P TY +A   +    W  AMD E+ ++ +   W +   P + KPIGCKW+YK K +  
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 312 GKVQTFKARLVAK 325
           G ++ +KARLVAK
Sbjct: 144 GTIERYKARLVAK 153

[Close]

BLAST of MELO3C032112 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 52.8 bits (125), Expect = 1.2e-06
Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 269 WIKAMDLEMKSIYSNSVWTLVDQPNDVKPIGCKWIYKRKRDQAGKVQTFKARLVAK 325
           W +AM  E+ ++  N  W LV  P +   +GCKW++K K    G +   KARLVAK
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAK 95

[Close]

BLAST of MELO3C032112 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 3.8e-05
Identity = 28/87 (32.18%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 78  NQTLLDMVRSMMSFAQLPDSFWGYALETVIYILNNVPSKIVS-ETPYELWKRCKGSLRHF 137
           N+T+++ VRSM+    LP +F   A  T ++I+N  PS  ++   P E+W +   +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 138 RIWGCPALALVQNPKKLKRYPK-ESKG 163
           R +GC A       K   R  K E KG
Sbjct: 62  RRFGCVAYIHCDEGKLKPRAKKGEEKG 88

The following BLAST results are available for this feature:

BLAST of MELO3C032112 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062742.1	2.6e-181	70.58	gag/pol protein [Cucumis melo var. makuwa] >TYK22541.1 gag/pol protein [Cucumis ...	[more]
TYK03644.1	6.4e-180	63.41	gag/pol protein [Cucumis melo var. makuwa]	[more]
ADJ18449.1	1.2e-178	58.37	gag/pol protein, partial [Bryonia dioica]	[more]
KAA0025729.1	3.5e-170	62.91	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK06159.1	6.0e-170	62.91	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032112 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.1e-56	27.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.8e-21	30.34	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	2.2e-13	28.87	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.8e-13	28.87	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92520	1.7e-05	41.07	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO3C032112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DFR5	1.3e-181	70.58	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G0023...	[more]
A0A5D3BX45	3.1e-180	63.41	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G007...	[more]
E2GK51	5.8e-179	58.37	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5A7SKC9	1.7e-170	62.91	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G0010...	[more]
A0A5D3C701	2.9e-170	62.91	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G0008...	[more]

BLAST of MELO3C032112 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.5e-09	39.73	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.2e-06	41.07	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	3.8e-05	32.18	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..131 e-value: 5.3E-23 score: 83.7
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 283..327 e-value: 1.2E-9 score: 38.1
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 252..328 coord: 55..195 coord: 345..415
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..130 score: 16.36754
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 4..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032112.1	MELO3C032112.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding