MELO3C032083 (gene) Melon (DHL92) v4

Overview
NameMELO3C032083
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionprotein LONGIFOLIA 2
Locationchr06: 17956723 .. 17960452 (+)
RNA-Seq ExpressionMELO3C032083
SyntenyMELO3C032083
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGAAAGGCTCTAAAAACCCCAATCTCAATCCTCTCCATCTCCACCTCTATCGACTGGCCACACTTCTCATCAACAACAAACCACGAAGCCCTAAAAGAAAGCACATCTCGATCACACTACTCGCTTTCTCATTGATGTCAACCCACGACATTTTGGCCGGCCCCTACTCGATTTCTCAATTAGACGGCGACCCACGGAGCTGACGACCCACAAAGCTGATGTATATATGATGAAGGCTCTAATTTGATAAGGTCTAATTTGATAAGCTTGATTCCCTTCAACTTCTCTCATAATCCAAACACCAACATTCACAATATGAAGATCCTCCACATCAATTCATTGTTGCTGATATTTCTGCCGCTGACAACAAATCTTAGTTCCGTCTCATCCCATCAGTTACTATGAAGTTGCTGCTGGCGGTGGTGAAGAAGGAAAATATAAGAGATTGTTGAACTCTTCACACGTTGCTCAGTTAAAAAGGTATTCTTGTGTTGGTTTTCTTTTCATTCATCTTTTAAATGCTCATCACCGAGTAATATTTTTGCTTGATCAGTTATCAATGGTGGCTAGTAGTGAAGATGGGTCGACGGTAGAACAAGATGCAATAGCACTAAAGCACCCCAGTCCCATCTATGTCCTCGATGGCTCGTTATATAGAGATGATGAAGCATCTCCTATGAAAAAAATTATGATTTCACTTCTCAGTAAACTCTTGTTATTAAACCATTTATGGCAGTTGCTTTGTCAAAAGTTATTAGTCCAATTAAACTGATTTAGTAATTTTATTTGTCTGATTTTACTCTACGATAGTTCAAGGAATGATAATCCATTTGTCTAAACCTTCAAATTTTCAAGGATATAAAAATTGTAGTTATAGTTGTTTGTTTCTTGACTGGTTGTCATGCTACGCTATGTCCATTTCTAATTTTGTAATGGGTTCTAAGTTCAATAACAGGTTCTCTCAATGCAACGGTATGATCTAAAACTCTGGAATCATTGCATCTGTAATTAAATCTGGTGATCAGGATGGGTTGCGAGTGATAAAAGTCCTTAGATTGTGTTGCTTCAGAGGAAACCAAGTCAGTTGCTCGTGTTCCAAATAATGGTAATAATTTTGTGTTTGTTATAGCTTCTTGGGAATTCTAATGCTTATGTGTCTCGTGTTCTTTTTTCCTATGTAGAAAGTATAGGGAAGAGTGAGTGTGATCTGCCTGCATTTCGTGAGTTCCATCTTCTATATAATCATCTCTTCCATTTTTCGAGCCTTTCTCCTCCAATTGTGCCATTATAGTAAACAATAGAGAGGCAAAGTACTAACAAATGAACTTTCTACAAGGAAATCGTTGAAATTCATGTGAGTTCGATTACCTTTTTTATATAATCTTAAGGTAGCTATGCATCTTTATACAACCTCCCTCTTCTCCCAATAAAAATAAATAAATAAATGAAATCACCACCACAAACTTATTTAGTGTGAAAGTTTAATAACATTAATTTAAAGCAAGTAAATTAGGCATGCTCATGCTGACTGTGAATTAGGCTTCATTTTGTATTGTCATTGTCTGAATGTGATGCTTTGTTTAATTTCATCATCCTATCAACTAAATTCGCTGGTGAGGCCTTAAGCTTATTGATCGATATGCTGAATGATGACTTAGTTTCTGTCCGCTTCCAAGCTTTCGAAACATTACATCATATGGCAGTCTAAGGTATAAATGATGATATATGTATATAACTTTTGTATCTGTTAGAATTGTTTGTTACAAGGGGGGACCATTTGAAGGTTAGAAATAGGTAGAGGAGAGAAGGATGAGGGGAGGAAAATTTTCATGAAGTAGTGGGCACTGTAGCTCTAGAGAGAGAGTTTTCAGTGATAGTATTTTTCGTTTATGAATTACATATTGTAATAGTTGAGGTCCTTCGTTTACATTGCTGATCGTTGAGTTCCTTCATTTACCTTTTTGGCTATTTCATATTGTAATCGTTGAGCTCCTTCGTTTACACTTCCGATCGTTCAGTTCCTTCGTTTACCTTTTTGGCTATTTCATATTGTAATCGTTGAGCACCTTCATTTATACTTCTGATCGTTGAGTTCCTTCGTTTACCTTTTTTGCTATTTCATATTATAATCGTTGAGCTCCTTCGTTTACACTTCTGATCGTTGAGTTCCTTCGTTTACCTTTTTGGCTATTTCATATTGTAATCTTTGAGCTCCTTCGTTTACACTTCCAATGGTTCAGTTCCTTCGTTTACCTTTTTGGCTATTTCATATTGTAATCGTTGAGCTCCTTCGTTTACACTTCCGATCGTTGAGTTCCTTCGTTTACCTTTTTGGCTATTTCATATTGTAACCGTTGAGCTCCTTCGTTTACACTTCCGATCGTTGAGTTCCTTCGTTTACCTTTTTGGCTATTTCATATTGTAATTGTTGAGCTCCTTCGTTTACACTTCCGATCGTTGAGTTCCTTCGTTTACCTTTTTGGCTATTTCATATTGTAATCGTTGAGCTTCTTCGTTTACATTTCCGATCATTGAGTTCCTTCGTTTACCTTTTGGCTATTTCATATTGTAATCATTGAGCTCCTTCGTTTACACTTCTGGTCATTGAGTTCCTTCGTTTACCTTTTTGGATATTTCATATTGTAATCGTTGTGTTTAGGATAAGATATTTTGTCACACATTTTGTCACAAATTTTGTCATATACTTCGTCACATATTTTATCACATATTTTGTCATATACTTTGTCACATATTTTGTCACATATTTTTGTGTTCGAGCTACCATGGAAAATACAGTGCTGGAGGAAAATACAACTGTCATGTTCAATATCAATGAGGTAAGGTTATCTTAGAAATTACTAAAATGCAGTTTTTGAAGTTCATCAAATTATTTCCATTGATTTAGTATTTGTAACTTGAATACATTTTTTGCTAAGATGAGACACTTTGTTTTACTTGCCAGGCGCTAAAAGTTGTTCTCAGCCTTCTACTTCAAATCCGAGCACTTCATAATCCATTTTCATTCAAAAGGTTGGTTTTCTCTCCTTTTGTACTTTGTGCTAGTGCATCGTTCGATCAATTTTTTTTTTTACTTTTAGCCATTGATATGCTTGTAGGTATTTTAGCTTTGAGTTTTATTAAGTATGTGCGCTGAATTTGGTGTTTGCGATTATGTGTTCTTGAAGTGTGTATGTAATTTAGGTAAGTTTGTGGGCTGAAGTTGGTGTTTGCGCTTATGTGTTGTTGAAGTGTGTATGTAATTTAGATAAGTATATTGTTGATCATGAAGTGCTGTTGAAGTGTGTATGTAATTTAGCTTAGTTTGTGGCCTGAATTTAGATAAGCTTAGAAGTTATTATTCTTGAAGTGTGTTTGTGCTCTATGTTGTTGAAGTGTGTTATTGATCATGAAGTGTTGTTGAAGTGTATTGTTGATCATGAAGTGTTGTTGAAGTGTGTTGTTGATCATGAAGTGTTGTTGAAGTGTGTATGTAATTTACCTGAGTTTGTGGGATGAATTTAGCTAAGCTTAGAAGTTATTAATCTTGAAGTGTGTATGTGCTCTATGTTGTTGAAGTGTGTTGTTCATCATGAAGTGAATATGATGTGTTTATGTGGGTGAATATGTTGTCTTGTTGAATCATTTTTTTCCTTTTCTTATCTTATTAGGTTTTGCCACAATCCATTGGAGCAATGAAGCCATATTTACGCCAATTCATTGATGTATAG

mRNA sequence

CACGAAAGGCTCTAAAAACCCCAATCTCAATCCTCTCCATCTCCACCTCTATCGACTGGCCACACTTCTCATCAACAACAAACCACGAAGCCCTAAAAGAAAGCACATCTCGATCACACTACTCGCTTTCTCATTGATGTCAACCCACGACATTTTGGCCGGCCCCTACTCGATTTCTCAATTAGACGGCGACCCACGGAGCTGACGACCCACAAAGCTGATGTATATATGATGAAGGCTCTAATTTGATAAGGTCTAATTTGATAAGCTTGATTCCCTTCAACTTCTCTCATAATCCAAACACCAACATTCACAATATGAAGATCCTCCACATCAATTCATTGTTGCTGATATTTCTGCCGCTGACAACAAATCTTAGTTCCGTCTCATCCCATCAGTTACTATGAAGTTGCTGCTGGCGGTGGTGAAGAAGGAAAATATAAGAGATTGTTGAACTCTTCACACGTTGCTCAGTTAAAAAGTTATCAATGGTGGCTAGTAGTGAAGATGGGTCGACGGTAGAACAAGATGCAATAGCACTAAAGCACCCCAGTCCCATCTATGTCCTCGATGGCTCGTTATATAGAGATGATGAAGCATCTCCTATGAAAAAAATTATGATTTCACTTCTCAGTTCTCTCAATGCAACGGTTTTGCCACAATCCATTGGAGCAATGAAGCCATATTTACGCCAATTCATTGATGTATAG

Coding sequence (CDS)

ATGGTGGCTAGTAGTGAAGATGGGTCGACGGTAGAACAAGATGCAATAGCACTAAAGCACCCCAGTCCCATCTATGTCCTCGATGGCTCGTTATATAGAGATGATGAAGCATCTCCTATGAAAAAAATTATGATTTCACTTCTCAGTTCTCTCAATGCAACGGTTTTGCCACAATCCATTGGAGCAATGAAGCCATATTTACGCCAATTCATTGATGTATAG

Protein sequence

MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISLLSSLNATVLPQSIGAMKPYLRQFIDV
Homology
[Close]
BLAST of MELO3C032083 vs. NCBI nr
Match: XP_008453286.1 (PREDICTED: protein LONGIFOLIA 2 [Cucumis melo] >KAA0058000.1 protein LONGIFOLIA 2 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 2.7e-13
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISL 48
           MVASSEDGSTVEQDAIAL+HPSP+ VLDGSLYRDDEASP+KKI ISL
Sbjct: 741 MVASSEDGSTVEQDAIALEHPSPVSVLDGSLYRDDEASPVKKITISL 787

[Close]
BLAST of MELO3C032083 vs. NCBI nr
Match: TYK25871.1 (putative serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 1  MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISLLSSL 52
          MVASSEDGSTV QDAIALKHPSP++VLDGSLY+DD+AS MKKI ISL  S+
Sbjct: 1  MVASSEDGSTVGQDAIALKHPSPVFVLDGSLYKDDKASVMKKITISLHESI 51

[Close]
BLAST of MELO3C032083 vs. NCBI nr
Match: XP_031744429.1 (protein LONGIFOLIA 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 3.0e-12
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISL 48
           MVAS EDGSTVEQDAIAL+HPSP+ VLDGSLYRDDE SP+KKI ISL
Sbjct: 720 MVASREDGSTVEQDAIALEHPSPVSVLDGSLYRDDETSPVKKITISL 766

[Close]
BLAST of MELO3C032083 vs. NCBI nr
Match: XP_031744421.1 (protein LONGIFOLIA 1 isoform X1 [Cucumis sativus] >XP_031744425.1 protein LONGIFOLIA 1 isoform X1 [Cucumis sativus] >KGN63735.1 hypothetical protein Csa_013335 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 3.0e-12
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISL 48
           MVAS EDGSTVEQDAIAL+HPSP+ VLDGSLYRDDE SP+KKI ISL
Sbjct: 742 MVASREDGSTVEQDAIALEHPSPVSVLDGSLYRDDETSPVKKITISL 788

[Close]
BLAST of MELO3C032083 vs. NCBI nr
Match: XP_038879431.1 (protein LONGIFOLIA 2-like [Benincasa hispida])

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-10
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDG-SLYRDDEASPMKKIMISL 48
           MVASS+DG TVEQDAIAL+HPSP+ VLD  SLYRDDEASP+KKI ISL
Sbjct: 742 MVASSQDGLTVEQDAIALEHPSPVSVLDAPSLYRDDEASPVKKITISL 789

[Close]
BLAST of MELO3C032083 vs. ExPASy TrEMBL
Match: A0A5A7US64 (Protein LONGIFOLIA 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003040 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-13
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISL 48
           MVASSEDGSTVEQDAIAL+HPSP+ VLDGSLYRDDEASP+KKI ISL
Sbjct: 741 MVASSEDGSTVEQDAIALEHPSPVSVLDGSLYRDDEASPVKKITISL 787

[Close]
BLAST of MELO3C032083 vs. ExPASy TrEMBL
Match: A0A1S3BVW9 (protein LONGIFOLIA 2 OS=Cucumis melo OX=3656 GN=LOC103494052 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-13
Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISL 48
           MVASSEDGSTVEQDAIAL+HPSP+ VLDGSLYRDDEASP+KKI ISL
Sbjct: 741 MVASSEDGSTVEQDAIALEHPSPVSVLDGSLYRDDEASPVKKITISL 787

[Close]
BLAST of MELO3C032083 vs. ExPASy TrEMBL
Match: A0A5D3DQB6 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00890 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.5e-13
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 1  MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISLLSSL 52
          MVASSEDGSTV QDAIALKHPSP++VLDGSLY+DD+AS MKKI ISL  S+
Sbjct: 1  MVASSEDGSTVGQDAIALKHPSPVFVLDGSLYKDDKASVMKKITISLHESI 51

[Close]
BLAST of MELO3C032083 vs. ExPASy TrEMBL
Match: A0A0A0LPB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014320 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISL 48
           MVAS EDGSTVEQDAIAL+HPSP+ VLDGSLYRDDE SP+KKI ISL
Sbjct: 742 MVASREDGSTVEQDAIALEHPSPVSVLDGSLYRDDETSPVKKITISL 788

[Close]
BLAST of MELO3C032083 vs. ExPASy TrEMBL
Match: A0A6J1C4F0 (protein LONGIFOLIA 1-like OS=Momordica charantia OX=3673 GN=LOC111007288 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.8e-10
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 1   MVASSEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMKKIMISL 48
           +V SSEDGST+ QD IAL+HPSP+ VLD SLYRDDEASP+K+I  SL
Sbjct: 748 IVTSSEDGSTINQDTIALEHPSPVSVLDASLYRDDEASPVKQITTSL 794

[Close]
BLAST of MELO3C032083 vs. TAIR 10
Match: AT1G74160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 7.6e-06
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 0 

Query: 5   SEDGSTVEQDAIALKHPSPIYVLDGSLYRDDEASPMK 42
           SEDG +     +AL+HPSPI VLD S YR+ E SP+K
Sbjct: 707 SEDGLSANLSLVALEHPSPISVLDASTYRETEPSPVK 743

The following BLAST results are available for this feature:
BLAST of MELO3C032083 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453286.12.7e-1389.36PREDICTED: protein LONGIFOLIA 2 [Cucumis melo] >KAA0058000.1 protein LONGIFOLIA ... [more]
TYK25871.11.8e-1280.39putative serine/threonine-protein kinase [Cucumis melo var. makuwa][more]
XP_031744429.13.0e-1285.11protein LONGIFOLIA 1 isoform X2 [Cucumis sativus][more]
XP_031744421.13.0e-1285.11protein LONGIFOLIA 1 isoform X1 [Cucumis sativus] >XP_031744425.1 protein LONGIF... [more]
XP_038879431.13.7e-1081.25protein LONGIFOLIA 2-like [Benincasa hispida][more]
BLAST of MELO3C032083 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032083 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7US641.3e-1389.36Protein LONGIFOLIA 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274... [more]
A0A1S3BVW91.3e-1389.36protein LONGIFOLIA 2 OS=Cucumis melo OX=3656 GN=LOC103494052 PE=4 SV=1[more]
A0A5D3DQB68.5e-1380.39Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0LPB51.5e-1285.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014320 PE=4 SV=1[more]
A0A6J1C4F08.8e-1072.34protein LONGIFOLIA 1-like OS=Momordica charantia OX=3673 GN=LOC111007288 PE=4 SV... [more]
BLAST of MELO3C032083 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G74160.17.6e-0656.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032083.1MELO3C032083.1mRNA