MELO3C032059 (gene) Melon (DHL92) v4

Overview
NameMELO3C032059
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr09: 7030578 .. 7039895 (+)
RNA-Seq ExpressionMELO3C032059
SyntenyMELO3C032059
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTAAAGTGGACATTTCAGGCCATCGTCGAAATGCGGGGGCCATCGTGCAGTGGCTTTGGGTGGAACGATGAAGAAAAATGTATCATTGCGGAGAAAGAATTATTTGATAATTGAGTTGGGGTAAGGAAAATAATATAAACATCACACAATGTTCACAATGTACATTTACTTAACAATTTTTCAATTAATACTCATACGTGATCTTTTTTCCCTGCAGTCGCATCCTGCAGCGAAGGGACTCCTCAACAAACTGTTCCCGTATTACGACGAACTTACATATGTGTTCGGTCGCGATAGGGCGACGAGTCGGTTCGTTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTAACGGGCATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTCCCGCCCGTGTATAGCCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCATCTCGCGCTTTAAAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAGACTTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGATGATTGCAGAGTGGCCTGCACGCGTCCTTGCCAACGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAGGGCGCTATTGCAAAGGTATCTTCTGTCTTGTATAGACGACCTTCGTGCTTTCGTACTCATGTTTGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTATAAGACATCAAGAGATAGTTTATGTTTGTACCGACTTGGGTTGCATCTTATTTGCCTACATAAAAGATACTCTTGAAATAATACAGTACATCATAATGAGTACTAAGTCTAGGTTATTCAAACCATACACAAAAGCAATTCAATCAAAAGAAATAATCTTATATAACATGAGGGTAGCCTAACGATACAAAGACTGCAGAAGAAGAAGAAAGAAAAAGAAAAGTAAAGCTGTAACGACTCAACTCCTTATTCTGAGTCGAAGCCATTACTAAACACAAATAAAGTTATAAAGTTTGGTTAAAACGAACAAAACCTCAAAATTTTATTTATTTAAAAAAAACAAATCAAAGGTAATGTGCAAAACGTAACAAATATTAAAATCCTACTCGAGCCCTATCTACTTTTAAAGAAACGAAATAGTAAATAAAGAATAATAAAAAATCAAGTACTAAAAGTTTAAACGGAGTGTAAAGCGGAAGCAGAAATCCCTATGACTCGCCACGGTCACTTCTGGTTGCTCGCCAGCTTGCCCTTGCCCTTACCTCTGCCCCTACCTGAAAAATATGACATGAAAAGAGTGAGTACAAAATACTCAGTAAGGGACCCACTACGAGTCCCACTAGGTGCCTGTTAACTTCCTATTAGAGTCCTGAAAATGGTACCCAATAACTGGCACGTTCCCGAACACGTGCAACATGCACTCCCATAGGAACAAAATTTGGTCTTCGGTATCCCGAGGGAGCACCTAGGACATACTGGTCTGTAGCGAACCCGGAGGAAACACTAAGAAAATCAGGCTGCGAAGATCCCGTCGAATCACTCGAATCATATCTATATCCATGTCAGACTGGTGGTCCCGTCGGACTACGCAGTCCTAAATAGGTGGTGATCCCGAAGGACACCCATACAGGTACGACTCTAATAGGCTAAGCTAACAGGTACCCTAACCATAGCATACATATACATAGCATCATCAGGTAATCATATCAGTCTAATCATCATATCACATCTCATCACAATATCCAAACATAAAGCCATAACCAGCCACGTCATCACATTATACCATGCCATCAAATCAAATCACATCATCAGTCACATCATGCCCTCATTAATTAACATATTGTTATACAGTCTAGTCCTCAGCATGCGTAACTAGGAATGCATGCGGTCTCATGATTCTAGTCGTAGAGCTAGTAGTAGAAATCTCTTACCTGGAGATTTGCTCAAAGAGTCCTAACAGCAAGAAAATGCGCTTTCCAAGCAGCGAGGTCCTAAATGTTTAATAACGCCAATTTTCATAACTTGAACATTAAACGACCAAGGACTCAAGGATTTAGTTGGAATAACTTACTCGTGGTCGGGTTACAAGGAGGTGGTCCTTACTGGAGGAGTCTTTCACTCTACAATTCAATTGGTCCAAGCTACCTTTTTAAGAGAGATAAATCAGTTTAATCCAAATAAATTATTTAGGTTCAAAAATCTTAAGTCCTTGCTGGGTGTGCCAAAAACCCAATTAACTTACCAAAATAGGTGCAAAGAACTGGAGCAGGCTGACGGCTCAAGGACAGGCGAATCGGCTCGACTAGAAAAGCAGGAATCGACTCGACTTGAAGGCTGGAGTCGGCTCGGCTTGTGGCAGAAGGCGCGGCTCGACGCAGAGAGGAACAACTCGGCTACGGCGCGAATAGGTGCGACGCGGCTCGGGTCGCAAAGGGTGATGCAGGTCGATCTAATTCGCGCAGAGCTGGGCGCGCGGGTCGCATTTCCGACTTGGGCGATGGTGGGGATGGAACGCGGCGCTCGGTGACGGCTTGCAGGCGGAGGAGATGCGGTTGGGCAGGCGTTTTGTTTGGGAGCGAGGCGGAGACGCAATCGGGTCGGGTTTATGCGTGAACGAGGCACGGTGTGGGTTTTTGGATTCGAGCGACTGGCGGTGCGGGTCCGACGATCGGTTAGCTCGGTACGATCGGCTGGATTGGCGACGGAGACAGCAGCGACCGGCGGAGCTTCAGGGTGTCGGCGTTTGGCTGAAACACGACGGATAACAGAAGGATTTGGCTGGCGGTTGGGGAGACGCGGGTCGGCTTGGAGACGCGAAGAGTGGCAGCTCTGATGGGTGTCGATCGGCTCGGCGGATCTGTTCGGGTTGATCTGTAGCGAAGGCCCAACGGAAGGCTTGGGCAGACGGCGCGGCGCGGCGGCGAGAGAGGAGGGTGTTGGCGGCGCTTTTAGGGCTAGGGTTTCTTTTTTTTTTCTTTTTTTTTTGGTTTGGTTGAAAAGGAAGATGAATAGTGAGCTATTTAATGCAATAATAATAATAATTCTTTATCATTATTATTATCTTTTCTCTTCCCCAAAAGTCTCACTCTCTTTCTTCCATTAAACCCATCAAAATCTCCCTCTTTCAATTTCAACCAATCACATCAATCCCTTCTCTTTCTCTTTCTTTTTCCAGATAATATCTCACCATTACCTTTAACAAAAATCAATTCTCTCTCTCCTCAACCCAATTATCTTTATTTTTCACATATAACTCTACCAATTTTATTATCCAAAACAAGTTAATTATATAACTCTAAATCTTAATTAAACACAGTCAAAATAATCAAGTTCCTCAATTACTTCCAATGTTCCCATAATTACACTTAAGATGATAAATTAAGTTCCAAATTGTTGGGGCGTTACAAAAGCGAATTAGAGAAGAAGAGATGATGATCATGATCATGAATTCAAAGAAAAATAAAAGAAGAAGAATGGAGAAAAAATAGTCGACTCTGCCGCTATGAAGAAGATAAAGAAGGAAGACGCCACGCAATGCAATCTGCAGCTTGAAGAAATTTGACGGCCATGAGGTAGAAGAAGAAGATTTTGTCCACGAAATTTAAAAAATGAGGGAATTCTTGTATTCTTATAATTAACAAAAAAAAAATCCACCATGGGTGTCAATAGGCTTTTTTTTTTTAATTCAAATTGTAATTAGTTTATATTTGGTTGTACCTATGTAAATTTCCCTTTTAAAAACTATATATATATATATATATTTAAAATTTATAGAAATCTTTAAAATGATTTTTTTTTTTAGGTAAACTTTGAAATCAAATGTTAGATATAAATTTAATTTATATGAATTATAAAGTATTTTTTTAATAATTTTAATATGAAATTACATATAACCCATTAACTAATAACTAAAACGAGTGTATTAAAAAATTAAAATGAGCAAAGGGGAAATAAGTATTTTCCAAAAGTAATGACTTTTCTCCCCTCTTTAATATGTTAGGATCAAGAGGTGAATGTGCTACGTGTGTATAGAAAAATATAAAAACAAAAAGAAAAAAGAAAAAAAGAACATAAATTAATCAAAAGTAAGACGTGATATATTAGAGAGAAATTAAATTTTTTAGGAAGGAAAGGAAAGATTAGGAACAAAGGCTTTGCTATTGTCAAAATTAAAAAAAAAAAAATCTACCACCAAATTTCTAAAAAACCAAAACAAAACAACAAAAAAAGTTCAACAAATTAAAACAAAACAAAAAGAGAAAAGGTGAGAAAAATAGTTGATGAAAAATGGGAGGTTGAAATTCAGTGTTCATAGAAAAAAAGTTAGATATCAAATCATAATTTGATTTGATTTTTGAAAATCAAATATAGGTTACTAAAATTAAATATTAGAGATAACTAAAAGTTTTATTATAAGATTAAATTGCAGATGTTGTAAATTTATAGTATATATAAAAGCTCTTATGTGGAGAAATTTTTTTAGTCCATTATACCCTTTTGATTATAAGTGTTCTTACCATTCATTTGATGACATTTTTGTCATTCACCTCCTGCATGAATAGTGGGTGAATTTTAACTATTCTCACCATTTCTTTAACCATTTCAATATTTGACAGATTACCTTAATTAACTTCATGGGTAGTGGAAGAGTTTTTATAGGCATGATAATAAATTCAAGAAGCCTTTTAAAATTCTCTAACCCACACTTTCTACCAATTTATTCAACATAAATGTGTGGTATCCTCGTGTTTTATTGAAGCAACAAGTCATTGAAGTGGAGAGTGAAATGCAAGGAGATAAGAAAGATGAGAAGATAAAGATAAAGAATGAGTTTAGAAAATTACATCATCAATTAGGAGGAGAGGAAAATGCAAGAACACAAGATTTATTTCTTCAGTGTTAGAGATCATATATGCAAATATCTTCTTTCATTTCTTTGTAAATATTATCTTCTTTTCTATTTCTTTGAAACTATTTGTTATTTTTTTTAAGTTACATATGTAAGTAGAATGAATTTTTTTCTTGCATATTATTTTCTATTATTTTTTCATTTTTTTAGTTGAAATGAGAAAATAAAATGACATAAAACCTTAAGGGCTGTTTGGGGAAAGGTTAGTACTGTGGGCTTGGGTTAGCCCAACCGTTTATGGAAACCATAGTTTTAAGGTTTCCCAAACACAATTTTCTTCTCTCCCAAACCAGCGTACGTTTCGTCTTCAACGCGTGTTTCATCTTCCCCTCAATCGTCGTCTTCAACCCGTGTTTCGTCTTCCCTCATGAACTCCCATCAATTCTCCCTCTTTCGTTGTCTGGTCTCTCTTTGTATTCATTTTAATAGTTTTGTCAAACAAATTTAAATTTTGTTATTGCTCTTCAATATTAAAATTTATATGAATATTTCTAAATAATTATAAATAATTAGATGAACCGTTTATAATAATGACGCGTAATTAAAAAATTAAATATAAATTAGAATAATTATTAAATAATTAGGTACACGATTTTTTTTCAAAATCTAAACGATCGTATAGCCAAATCTAAACGGTCGTATACCAAATTTTAGAGAAAAAAATCGTTTAGATTCGGAACCCCAAATCTAAACGATCGTGTAGCCAAATCTAACGATCGAGTAGCCAAATATGAACGATCGTGTAACCAAATCTAAACGATCATGTAGTCAAATCTAAACGATTGTATATCAAATTTTGAAAAAACAAATTTTAGATTTGGAACCCCAAATCCAAACGATCGTGTAGCCAAATCTAAACGATCGTATACCAAATTTTGAAAAAAAAGGTTTAGATTTGGGGTAGCCAAATCTAAACAATCGTGTAGAAAAATCTAAACGATCGAGTAGACAAATCTAAACGATCGTGTACCCAAGTAATTAAATGATCGTGTACCAAATCGCGTTACCAAATATATTACGCGCATTGTTGACGGGGTATTTTTGGTATTTTATAGGGTGTCCTTTCCAAGGTCTGGTCTGACTTGTTTTCGTTCTGTCTTCTCGCTCAATTCGTCTTCTCCCTCGTTCATTTTGTGTTCTCCCTCAATCTGAACATCTCCCTCCTTCGTTTGACGACCCTCTGTTCTCCCTCATCAAAATGTTTTTTTTTCTCCTTATTTTGTTCTCTGTTCTTCCTCGATCCGTTTTCATGCAAATTTATTTTTCGTTGCGTTTCGCCGATTGGGGAGGATTTCGTGTAGTCGAATCTCTATCTACATCTCTCTCATCCGTCTCTCTCACTTTCGAAAGGGTATGTCGTGTTTGTTGAAGCCGACCCTTCCACGGCATTGGCTCCAAACACGACAACCTTTTGAAGTATAAGATTTTGCCTCCAAATAAATTTTGTTGAAGGTGACCCTAACAGAAAATCCTTGCCGCTCGAGTTTCCATTGTTGCGGGTGGATATTTCGCTTGGCTTGGTGTCATTCCTTCACTGATAAGGCAGGTGCTTTGACACCACCGTTGTCTGCAAATGGTTGCCGAGCTTGGTAGGGAGGTATTGGACTATTTTAAATCCAACATCAAAGCCGATGATGAGTTTCATGATTGACATACACTGATTTTGTTACATTTTTTGTTTTCCATATATGTATGTAGCTTGATTTGTGGAATTTGTTCTACTTTAATTTCTAATTGCTGATGTATATGGGATTGCATTCTGTCTTTTGGTTAAGTTTTTTCTTAAAAAGTGTATGTTGACCTTATTCTGTTTTCTTCCGGTGGCTTTATTTTGGTTGCTTTGTTTCGGTTATTTTGTTTGGTTTAGTTTGGTTTACTCTGTTGCTTCTTGTTACCCAAGCATGGTAGGGAGTTACTTCTGAATTAGGTTTTGTTTGTGTTGGTTTTGTTTGGTTTACTTTCTTGCCCTTCAAGTTGTTTCTGTCCTTCACTATGTATATTACGATTTTGATAAAATCTCTTCATTTGTGTTTTGTCTCTTCAATGGTTTGTCTTATCTTTTCATGTGTTTGACTGTTGTTTGACTTATTTTGTAGCCTACTTTTGCAGAGATTCCCCTGCCTTTTCTTGGTTGGGTCATTTATTTGCATATTTAATCTCCATATCCTCTCTATATAAACCTTCTTTTCTGCTTATGATTTACCACTTCCATTTCTTATTGCTTGGCTCTTTCCTTCATATTATTATTCTTCTTTCGTAGGTAAATGGCTCTTTCCTTCATATTCTTCTTCTTTTGTATGTCCACTATGTTTGTATGCCTTGTTCTCTCTCAGTTTCTGCGTTGCTCTCTCACCATTTCTGCCCTCTTTTGTATGTCCACTATGTTGTATGTTATGGATAGTTTATTTACGTACGTTGGTGTCATGTTTATCACATACTTTCTGCCTATTTTTTTACATGTGTTTCTGCATTTGTTGTTTGTTTTTTTATCCCTTTTAATTGATGTTTCAACCACTATGAAATCTGGTTCAAGTTATTGAACCGATTTCTAAACTTTAAGGCTGCTTAACATTTGTTTTCAAATTTTATTTTTTGTTTTCAATGTTTTTTTTACCGTTTCAATATCGGGTCAGTGGTTCTCAATACAAGGTATGCACTTCTTCCGTTTCTTTTTTTTTCAATTATGTTGCATTTGAAAAACGTGTATTGTTTTCGACCTCACTTGTATACTAGTTCATTTTTTTTAGAACGTCCCCGGTTATCCCACACTTATAAGAGGTATTATGGCTTAGGCATATGTACATTAAACTTCCATGTCCTATTTCTTCATTTCATTACATTATAAATTATGTATGTACGTATTTTTACAGACTATTTGTTTTGTAATAATTTATTTTGATGGACATTTCATTTATATTCATTCAATATTATTATTTTTCTTTCCATTGTATGTTTTCAATATCTGTTTAAATTAAACTTTCACGTCCAACAAATGTCCTTTGAACAAATTTTCATATCAATGTTTATAACTAAGAGAAATAAAGCAAATAACTTAACAAATTAAAATACCAACGTTTATCAGTTCACAATTTTTTTATGAAAAAAATTTTCAAAGTTTTAAGGATTCTTGTAAGTAAGACAAATAAAACAATTAACTTAACATCATACTATAGTTATAAGTTTACAATTTTTTTATGAAAAGTTTTTTCAAAGTTTTAACAATCCTCGTAAGTAACACAAATAAAGCAATTAACTTAACATCATACTATAGTTTTAGTTCACAATTTTTTATGAAAATAAAGTTTTCAATATTTTAATAATCCTTCTAAGTAACATAAATAAAGCAATTAACTTAAGACCATACTATAGTTTATAAGTTCACAATTTTTTTTGAATAAAAAATTTTCAATGTTTGTACAATCCTTCTAACACAAATAAAGCAATTAACTTAATACCATACTAATTGACTGTAGAATAAAGACACTAAGAGGACATTTCAGACCATCGCCGAAATGCAGGGGCCATCGTGCAGTGGCTTTGGGTGGAACGATGAGGAGAAATGTATCATTGCGGAGAAAGAATTATTTGATAATTGGGTCAAGCTAAGGAAAATAATATAAATGTCACACAACGTTCGCAATGTATATTTACTTAACAATTTTTCTATTAGTACTCATAAGTGATCTTTTTTTTCCCGCAATCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCTTTTCTGTATTACGACAAACTTACATATGTGTTTCGTCGCGATAGGACGACGGGTCAGTTTGCTGAGACATTCGCCGACGTGGGGTCTAACGAGTCTGACGGGTATGACGGATTTGATATGAGGGATGGAAACGAGGAGTACTTCCCGCTCGTGTCCAGCCAAGGGATTGACCTGTCGTAGGACGATGTACACGTATCACGACCTTCTCGCGCTTCAGAGGGTAAGACTGAATCGAGTGGATCCAAGAGGAAGAGGAGAAGTCAGCGAGAGGTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAATGAGCAACTCAGGATGATTGCGGAGTGGCCTGCACGCGTCCTTGTCAATGACAACCATGTGCACACGGAATTCTTCTGCATATTGCGTGAGATGCCAGAACTAACGAGTTTGGATAGGGCACTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCCTACTCATGCATGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATGATGAGATAG

mRNA sequence

ATGATGGCGGAGAAACTACCTGGATGTCAGGTCCGAGCAACGACTGTAATTGATTGTAGAATTAAGACACTAAAGTGGACATTTCAGGCCATCGTCGAAATGCGGGGGCCATCGTGCAGTGGCTTTGGGTGGAACGATGAAGAAAAATGTATCATTGCGGAGAAAGAATTATTTGATAATTGAGTTGGGTCGCATCCTGCAGCGAAGGGACTCCTCAACAAACTGTTCCCGTATTACGACGAACTTACATATGTGTTCGGTCGCGATAGGGCGACGAGTCGGTTCGTTGAGACATTCGCCGACGTGGGGTCTAACGAGCCTAACGGGCATGACAGATTTGATATGGGGGATGGAAACGAGGAGTTCCCGCCCGTGTATAGCCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCATCTCGCGCTTTAAAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAGACTTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGATGATTGCAGAGTGGCCTGCACGCGTCCTTGCCAACGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCATGCCAGAACTAACGAGTTTGGATAGGGCACTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCCTACTCATGCATGAGGATGAGAGGGAGGGATTTTGTAGAGTCCTCCTACGAGACATGATGAGATAG

Coding sequence (CDS)

ATGGGGGATGGAAACGAGGAGTTCCCGCCCGTGTATAGCCAGGGGATTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCATCTCGCGCTTTAAAGGGTAGGACCGGATCGAGTGGATCCAAGAGGAAGAGGGGAAGTCAGCGAGACTTGGATGTTGAAGGCATACATCTGGCGCTCGACCAAACAAACGAGCAACTCAGGATGATTGCAGAGTGGCCTGCACGCGTCCTTGCCAACGACAACCATGTGCGCACGGAATTCTTCCGCATATTGCATGCCAGAACTAACGAGTTTGGATAG

Protein sequence

MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLALDQTNEQLRMIAEWPARVLANDNHVRTEFFRILHARTNEFG
Homology
[Close]
BLAST of MELO3C032059 vs. NCBI nr
Match: KAA0054460.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14578.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 174.9 bits (442), Expect = 3.6e-40
Identity = 87/93 (93.55%), Postives = 87/93 (93.55%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE FPPVYSQGIDLSQDDVRASRPSRA KGRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 116 MGDGNENFPPVYSQGIDLSQDDVRASRPSRASKGRTGSSGSKRKRGSQRDFDVEAIHLAL 175

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRILH 94
           DQTNEQLR IAEWPAR LANDNHVRTEFFRILH
Sbjct: 176 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILH 208

[Close]
BLAST of MELO3C032059 vs. NCBI nr
Match: KAA0040600.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK05642.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 88/92 (95.65%), Postives = 88/92 (95.65%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           M DGNEEFPPVYSQ IDLSQDDVRASRPSRALKGR GSSGSKRKRGSQRDLDVEGIHLAL
Sbjct: 112 MEDGNEEFPPVYSQRIDLSQDDVRASRPSRALKGRIGSSGSKRKRGSQRDLDVEGIHLAL 171

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRIL 93
           DQTNEQLRMI EWPARVLANDNHVRTEFFRIL
Sbjct: 172 DQTNEQLRMIVEWPARVLANDNHVRTEFFRIL 203

[Close]
BLAST of MELO3C032059 vs. NCBI nr
Match: KAA0025744.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 174.1 bits (440), Expect = 6.1e-40
Identity = 86/93 (92.47%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE+FPPVYSQGIDLSQDDVRASRPSRA +GRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 116 MGDGNEDFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 175

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRILH 94
           DQTNEQLR IAEWPAR LANDNHVRTEFFRILH
Sbjct: 176 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILH 208

[Close]
BLAST of MELO3C032059 vs. NCBI nr
Match: TYK06175.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 5.1e-39
Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE+FPPVYSQGIDLSQDDVRASRPSRA +GRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 116 MGDGNEDFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 175

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRIL 93
           DQTNEQLR IAEWPAR LANDNHVRTEFFRIL
Sbjct: 176 DQTNEQLRQIAEWPARNLANDNHVRTEFFRIL 207

[Close]
BLAST of MELO3C032059 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE+FPPVYSQG+D+SQDDVRASRPSRA +GRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 166 MGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 225

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRIL 93
           DQTNEQLR IAEWPAR LANDNHVRTEFFRIL
Sbjct: 226 DQTNEQLRQIAEWPARNLANDNHVRTEFFRIL 257

[Close]
BLAST of MELO3C032059 vs. ExPASy TrEMBL
Match: A0A5A7UGS3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00720 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40
Identity = 87/93 (93.55%), Postives = 87/93 (93.55%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE FPPVYSQGIDLSQDDVRASRPSRA KGRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 116 MGDGNENFPPVYSQGIDLSQDDVRASRPSRASKGRTGSSGSKRKRGSQRDFDVEAIHLAL 175

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRILH 94
           DQTNEQLR IAEWPAR LANDNHVRTEFFRILH
Sbjct: 176 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILH 208

[Close]
BLAST of MELO3C032059 vs. ExPASy TrEMBL
Match: A0A5A7TBB0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001040 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.3e-40
Identity = 88/92 (95.65%), Postives = 88/92 (95.65%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           M DGNEEFPPVYSQ IDLSQDDVRASRPSRALKGR GSSGSKRKRGSQRDLDVEGIHLAL
Sbjct: 112 MEDGNEEFPPVYSQRIDLSQDDVRASRPSRALKGRIGSSGSKRKRGSQRDLDVEGIHLAL 171

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRIL 93
           DQTNEQLRMI EWPARVLANDNHVRTEFFRIL
Sbjct: 172 DQTNEQLRMIVEWPARVLANDNHVRTEFFRIL 203

[Close]
BLAST of MELO3C032059 vs. ExPASy TrEMBL
Match: A0A5A7SJA5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00300 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40
Identity = 86/93 (92.47%), Postives = 88/93 (94.62%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE+FPPVYSQGIDLSQDDVRASRPSRA +GRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 116 MGDGNEDFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 175

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRILH 94
           DQTNEQLR IAEWPAR LANDNHVRTEFFRILH
Sbjct: 176 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILH 208

[Close]
BLAST of MELO3C032059 vs. ExPASy TrEMBL
Match: A0A5D3C464 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00290 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.5e-39
Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE+FPPVYSQGIDLSQDDVRASRPSRA +GRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 116 MGDGNEDFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 175

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRIL 93
           DQTNEQLR IAEWPAR LANDNHVRTEFFRIL
Sbjct: 176 DQTNEQLRQIAEWPARNLANDNHVRTEFFRIL 207

[Close]
BLAST of MELO3C032059 vs. ExPASy TrEMBL
Match: A0A5A7VES2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002250 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.5e-39
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1   MGDGNEEFPPVYSQGIDLSQDDVRASRPSRALKGRTGSSGSKRKRGSQRDLDVEGIHLAL 60
           MGDGNE+FPPVYSQG+D+SQDDVRASRPSRA +GRTGSSGSKRKRGSQRD DVE IHLAL
Sbjct: 166 MGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFDVEAIHLAL 225

Query: 61  DQTNEQLRMIAEWPARVLANDNHVRTEFFRIL 93
           DQTNEQLR IAEWPAR LANDNHVRTEFFRIL
Sbjct: 226 DQTNEQLRQIAEWPARNLANDNHVRTEFFRIL 257

The following BLAST results are available for this feature:
BLAST of MELO3C032059 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0054460.13.6e-4093.55retrotransposon protein [Cucumis melo var. makuwa] >TYK14578.1 retrotransposon p... [more]
KAA0040600.14.7e-4095.65retrotransposon protein [Cucumis melo var. makuwa] >TYK05642.1 retrotransposon p... [more]
KAA0025744.16.1e-4092.47retrotransposon protein [Cucumis melo var. makuwa][more]
TYK06175.15.1e-3992.39retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0066208.11.1e-3890.22retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C032059 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032059 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UGS31.7e-4093.55Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TBB02.3e-4095.65Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SJA52.9e-4092.47Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C4642.5e-3992.39Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VES25.5e-3990.22Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C032059 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032059.1MELO3C032059.1mRNA