MELO3C032052.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032052.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Envelope-like protein
Location	chr06: 16131526 .. 16133339 (-)
RNA-Seq Expression	MELO3C032052.jh1
Synteny	MELO3C032052.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAATACTCGCAAGGGTTCCTACATGACACAGTCATCTAAAGATGCACCTAAGGTTATAATTTCGTCGCCTCTTGTAACGACAGTTGAAGGTGAGAGGACGAAGGTTCAAAAGTACTCCGCCATGAAGGCCGTATCGACTTCCCTCTGAAAAATCACAGGAAGAGGCCTCAAGTAAGTTGCATGAATCTGTGCTGCCTGAGTCTGTGCCTGTGGTGGGTGAATCTTCTGTTCCTGGTTCTTCTGTCGCACATGCACCTCAAGTTCCTGCGACTATTGTGTCAGATATGGATTCGGATGATCGGGATGATGTACCTCTAGCTCGATTGTTCAAGAGGACCTTGATTCCAGATGTTTCAGATAAACTTCCTGTTGATCCCCCTAATTCTATTCATTCACAAGAAAGTTCATCAACATGAGGAGTATTTATTCCTACTCCTGGTATTCTCCCAGCATCTAACATTCAACCGGGGCCGTCAGCTCGTTTCCCTCCTGCATTGCCACCTCCATTTGCTACGGTTGATGCTCATGAATCTATTGCTGATGATGTTCCTGGTGATATTTATACTGCACCGGTGCGTCAACCAAATGATCGATGAGAAGAGGATGAGGTGGAACCTCAACAGCTTAATATTTGCATTGAAGAAGTTCGTCTAAATGATGATGACAATCCTACTCTTTCTCCTACTTCTGCTGATATCCCCGCTACATCTAAGCGAGCAGAAAGGAAATTTCAACAAAAGAGGCATAATATAACTACCAAAACTGGTAGGAAGAAGATTCCTCCAAATATTCCTTCTATCCCCATTGATGGAATATCCTTTCATCATGAAGAGAGTGTCCAGCGTTGGAAGTTTGTGGTGCAGCGAAGGATAGCAGATTAGGTAAATGTTTCTGACAAACATCAGTCCTGCATGGCATTATGGACCTTATTGAAAGGGCTGGTTTAACAAAAACTATTTCGAATGTCGGTCCATTTTATCCCCAGCTTATTAGGGAGTTTATAGTTAATTTTCCTAATGATTTTAATGATCCAAGTAGCCCGGATTATCAGACGGTTCATATTCGAGGGTTCAAATTTGTGATTTCTTCTACTGTGATTAACGGGTTTTTAGGGAATGTTATTGATGTTTACTGTTCTCCATCGTCTCCTTCCACTAATGTTCTAGCTTCTGTCTTATCTGGTGGGACGTTGTCCACTTGGCCTGTAAATGGAATTCCTGCAGTTGCTCTTAGCATCAAATATGCCATTTTCCATAAAATTGGCATTGCCAATTGGTTCCCTTCCTCTCGTGCCTCCAGTGTATCTGCTGCCTTAGGAACATTTCTGTATCGAATCTGCAATGATAATAAGGTGAATACGGGTGCATTCATTTACAATCAGTTGTTACGTCATGTTAGTTCATTTGGGGTTAAGACTTTCATTGCTCTTCCGCGACTCTTCTCAAATCTGTTACTACACCTCAACGGAGCTGTGCTCACTGCAGCTGATACTTCTGGACCTGACCCTAAAACTTTAGCCCTTAGCTACAGACTCTTTCAGGACAGTCATGTGCATGATATTGATATGATGTGCATCCATCTCTTGGCCCGTGCGTTTTCGACACTAGTGACTAGGATGAGTCTGCTGAAGGTTTCTTTGTTGATCGTGAGTTAGCTGCCCGCATTGTTAATGCTCTGACTTTTGAATCTCGTGCCTTAACCTACTCCATCAATCTGTTGTCTGAACGACGGTTGGAAATTGATGCCCTCATTCGACACTTGAAGACCTTTGCTCCATCTACTAGTCGTAGAGAATCAACTACTGATTGA

mRNA sequence

ATGGTAAATACTCGCAAGGGTTCCTACATGACACAGTCATCTAAAGATGCACCTAAGGTTATAATTTCGTCGCCTCTTGTAACGACAGTTGAAGGTGAGAGGACGAAGGTTCAAAAGTACTCCGCCATGAAGGCCGTATCGACTTCCCTCTGAAAAATCACAGGAAGAGGCCTCAAGTAAGTTGCATGAATCTGTGCTGCCTGAGTCTGTGCCTGTGGTGGGTGAATCTTCTGTTCCTGGTTCTTCTGTCGCACATGCACCTCAAGTTCCTGCGACTATTGTGTCAGATATGGATTCGGATGATCGGGATGATGTACCTCTAGCTCGATTGTTCAAGAGGACCTTGATTCCAGATGTTTCAGATAAACTTCCTGTTGATCCCCCTAATTCTATTCATTCACAAGAAACATCTAACATTCAACCGGGGCCGTCAGCTCGTTTCCCTCCTGCATTGCCACCTCCATTTGCTACGGTTGATGCTCATGAATCTATTGCTGATGATGTTCCTGGTGATATTTATACTGCACCGACTTTCATTGCTCTTCCGCGACTCTTCTCAAATCTGTTACTACACCTCAACGGAGCTGTGCTCACTGCAGCTGATACTTCTGGACCTGACCCTAAAACTTTAGCCCTTAGCTACAGACTCTTTCAGGACAGTCATGTGCATGATATTGATATGATGTGCATCCATCTCTTGGCCCGTGCGTTTTCGACACTAGTGACTAGGATGAGTCTGCTGAAGGTTTCTTTGTTGATCGTGAGTTAGCTGCCCGCATTGTTAATGCTCTGACTTTTGAATCTCGTGCCTTAACCTACTCCATCAATCTGTTGTCTGAACGACGGTTGGAAATTGATGCCCTCATTCGACACTTGAAGACCTTTGCTCCATCTACTAGTCGTAGAGAATCAACTACTGATTGA

Coding sequence (CDS)

ATGGATTCGGATGATCGGGATGATGTACCTCTAGCTCGATTGTTCAAGAGGACCTTGATTCCAGATGTTTCAGATAAACTTCCTGTTGATCCCCCTAATTCTATTCATTCACAAGAAACATCTAACATTCAACCGGGGCCGTCAGCTCGTTTCCCTCCTGCATTGCCACCTCCATTTGCTACGGTTGATGCTCATGAATCTATTGCTGATGATGTTCCTGGTGATATTTATACTGCACCGACTTTCATTGCTCTTCCGCGACTCTTCTCAAATCTGTTACTACACCTCAACGGAGCTGTGCTCACTGCAGCTGATACTTCTGGACCTGACCCTAAAACTTTAGCCCTTAGCTACAGACTCTTTCAGGACAGTCATGTGCATGATATTGATATGATGTGCATCCATCTCTTGGCCCGTGCGTTTTCGACACTAGTGACTAGGATGAGTCTGCTGAAGGTTTCTTTGTTGATCGTGAGTTAG

Protein sequence

MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETSNIQPGPSARFPPALPPPFATVDAHESIADDVPGDIYTAPTFIALPRLFSNLLLHLNGAVLTAADTSGPDPKTLALSYRLFQDSHVHDIDMMCIHLLARAFSTLVTRMSLLKVSLLIVS

Homology

[Close]

BLAST of MELO3C032052.jh1 vs. NCBI nr
Match: TYK01623.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 161 bits (408), Expect = 1.61e-42
Identity = 130/368 (35.33%), Postives = 130/368 (35.33%), Query Frame = 0


Query: 1    MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETSNIQPGPSARFPPALPPPFA 60
            MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQET         RFPPALPPPFA
Sbjct: 721  MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQET---------RFPPALPPPFA 780

Query: 61   TVDAHESIADDVPGDIYTAP---------------------------------------- 120
            TVDAHESIADDVPGDIYTAP                                        
Sbjct: 781  TVDAHESIADDVPGDIYTAPVRQPNDRREEDEVEPQQLNICIEEVRLNDDDNPALSPTSA 840

Query: 121  ------------------------------------------------------------ 140
                                                                        
Sbjct: 841  DIPATSKRAERKFQQKRHNITTKTGRKKIPPNIPSIPIDGISFHHEESVQRWKAGLTKTI 900

[Close]

BLAST of MELO3C032052.jh1 vs. NCBI nr
Match: XP_008457126.1 (PREDICTED: uncharacterized protein LOC103496872 [Cucumis melo])

HSP 1 Score: 121 bits (304), Expect = 2.14e-30
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 81  TFIALPRLFSNLLLHLNGAVLTAADTSGPDPKTLALSYRLFQDSHVHDIDMMCIHLLARA 140
           TFIALPRLFSNLLLHLNGAVLTAADTSGPDPKTLALSYRLFQDSHVHDIDMMCIHLLAR 
Sbjct: 166 TFIALPRLFSNLLLHLNGAVLTAADTSGPDPKTLALSYRLFQDSHVHDIDMMCIHLLARF 225

[Close]

BLAST of MELO3C032052.jh1 vs. NCBI nr
Match: KAA0035789.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 1.57e-27
Identity = 62/95 (65.26%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 1   MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETS----------------NIQ 60
           MDSD+RDDVPLARL KRTLIPDVS KLPVDPPNSIHSQE+S                N+Q
Sbjct: 28  MDSDNRDDVPLARLLKRTLIPDVSYKLPVDPPNSIHSQESSSTEEVFIPTPGIPPASNVQ 87

Query: 61  PGPSARFPPALPPPFATVDAHESIADDVPGDIYTA 79
            G SAR P A PPPFA+VDAHES+ +DV GDI  A
Sbjct: 88  QGSSARSPLASPPPFASVDAHESVPNDVSGDISAA 122

[Close]

BLAST of MELO3C032052.jh1 vs. NCBI nr
Match: TYK29825.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (274), Expect = 4.42e-27
Identity = 62/95 (65.26%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 1   MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETS----------------NIQ 60
           MDSDDRDDVPLARL KRTLIPDVS KLPVD PNSIHSQE+S                N+Q
Sbjct: 28  MDSDDRDDVPLARLLKRTLIPDVSYKLPVDSPNSIHSQESSSTEEVFIPTPGIPPASNVQ 87

Query: 61  PGPSARFPPALPPPFATVDAHESIADDVPGDIYTA 79
            G SAR P A PPPFA+VDAHES+ +DV GDI  A
Sbjct: 88  QGSSARSPLASPPPFASVDAHESVPNDVSGDISAA 122

[Close]

BLAST of MELO3C032052.jh1 vs. NCBI nr
Match: KAA0067026.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK26262.1 envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 110 bits (276), Expect = 2.14e-25
Identity = 60/96 (62.50%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 1   MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETS----------------NIQ 60
           MDSDD++DVPLARL K+TLIPDVSDKLP+DPP SIHSQE+S                NIQ
Sbjct: 78  MDSDDQNDVPLARLLKKTLIPDVSDKLPIDPPISIHSQESSSTEGVFIPTPSIPPASNIQ 137

Query: 61  PGPSARFPPALPPPFATVDAHESIADDVPGDIYTAP 80
           P PS R PPA PP FA++DAHES+ D V GDI  AP
Sbjct: 138 PRPSTRSPPASPPLFASIDAHESVLDVVSGDISAAP 173

[Close]

BLAST of MELO3C032052.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BPJ2 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002330 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 7.79e-43
Identity = 130/368 (35.33%), Postives = 130/368 (35.33%), Query Frame = 0


Query: 1    MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETSNIQPGPSARFPPALPPPFA 60
            MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQET         RFPPALPPPFA
Sbjct: 721  MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQET---------RFPPALPPPFA 780

Query: 61   TVDAHESIADDVPGDIYTAP---------------------------------------- 120
            TVDAHESIADDVPGDIYTAP                                        
Sbjct: 781  TVDAHESIADDVPGDIYTAPVRQPNDRREEDEVEPQQLNICIEEVRLNDDDNPALSPTSA 840

Query: 121  ------------------------------------------------------------ 140
                                                                        
Sbjct: 841  DIPATSKRAERKFQQKRHNITTKTGRKKIPPNIPSIPIDGISFHHEESVQRWKAGLTKTI 900

[Close]

BLAST of MELO3C032052.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C633 (uncharacterized protein LOC103496872 OS=Cucumis melo OX=3656 GN=LOC103496872 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 1.04e-30
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 81  TFIALPRLFSNLLLHLNGAVLTAADTSGPDPKTLALSYRLFQDSHVHDIDMMCIHLLARA 140
           TFIALPRLFSNLLLHLNGAVLTAADTSGPDPKTLALSYRLFQDSHVHDIDMMCIHLLAR 
Sbjct: 166 TFIALPRLFSNLLLHLNGAVLTAADTSGPDPKTLALSYRLFQDSHVHDIDMMCIHLLARF 225

[Close]

BLAST of MELO3C032052.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T328 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00740 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 7.58e-28
Identity = 62/95 (65.26%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 1   MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETS----------------NIQ 60
           MDSD+RDDVPLARL KRTLIPDVS KLPVDPPNSIHSQE+S                N+Q
Sbjct: 28  MDSDNRDDVPLARLLKRTLIPDVSYKLPVDPPNSIHSQESSSTEEVFIPTPGIPPASNVQ 87

Query: 61  PGPSARFPPALPPPFATVDAHESIADDVPGDIYTA 79
            G SAR P A PPPFA+VDAHES+ +DV GDI  A
Sbjct: 88  QGSSARSPLASPPPFASVDAHESVPNDVSGDISAA 122

[Close]

BLAST of MELO3C032052.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E3E1 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00530 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 2.14e-27
Identity = 62/95 (65.26%), Postives = 67/95 (70.53%), Query Frame = 0


Query: 1   MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETS----------------NIQ 60
           MDSDDRDDVPLARL KRTLIPDVS KLPVD PNSIHSQE+S                N+Q
Sbjct: 28  MDSDDRDDVPLARLLKRTLIPDVSYKLPVDSPNSIHSQESSSTEEVFIPTPGIPPASNVQ 87

Query: 61  PGPSARFPPALPPPFATVDAHESIADDVPGDIYTA 79
            G SAR P A PPPFA+VDAHES+ +DV GDI  A
Sbjct: 88  QGSSARSPLASPPPFASVDAHESVPNDVSGDISAA 122

[Close]

BLAST of MELO3C032052.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DS03 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00270 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 1.04e-25
Identity = 60/96 (62.50%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 1   MDSDDRDDVPLARLFKRTLIPDVSDKLPVDPPNSIHSQETS----------------NIQ 60
           MDSDD++DVPLARL K+TLIPDVSDKLP+DPP SIHSQE+S                NIQ
Sbjct: 78  MDSDDQNDVPLARLLKKTLIPDVSDKLPIDPPISIHSQESSSTEGVFIPTPSIPPASNIQ 137

Query: 61  PGPSARFPPALPPPFATVDAHESIADDVPGDIYTAP 80
           P PS R PPA PP FA++DAHES+ D V GDI  AP
Sbjct: 138 PRPSTRSPPASPPLFASIDAHESVLDVVSGDISAAP 173

The following BLAST results are available for this feature:

BLAST of MELO3C032052.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01623.1	1.61e-42	35.33	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
XP_008457126.1	2.14e-30	98.36	PREDICTED: uncharacterized protein LOC103496872 [Cucumis melo]	[more]
KAA0035789.1	1.57e-27	65.26	envelope-like protein [Cucumis melo var. makuwa]	[more]
TYK29825.1	4.42e-27	65.26	envelope-like protein [Cucumis melo var. makuwa]	[more]
KAA0067026.1	2.14e-25	62.50	envelope-like protein [Cucumis melo var. makuwa] >TYK26262.1 envelope-like prote...	[more]

BLAST of MELO3C032052.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032052.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPJ2	7.79e-43	35.33	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G...	[more]
A0A1S3C633	1.04e-30	98.36	uncharacterized protein LOC103496872 OS=Cucumis melo OX=3656 GN=LOC103496872 PE=...	[more]
A0A5A7T328	7.58e-28	65.26	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5D3E3E1	2.14e-27	65.26	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold20...	[more]
A0A5D3DS03	1.04e-25	62.50	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14...	[more]

BLAST of MELO3C032052.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032052.jh1.t1	MELO3C032052.jh1.t1	mRNA