MELO3C032028.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C032028.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	CACTA en-spm transposon protein
Location	chr06: 14164671 .. 14165443 (+)
RNA-Seq Expression	MELO3C032028.jh1
Synteny	MELO3C032028.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTTCTACAACGACAGCACGAGCTCGCTGAGAAGAAAGGGGAGTCGATCGACCGTGTGGAGTTGTTTCGAAAAATACACGTTCGAGCCGGGACGTTCGTGTCGCAGGACACAAAGGATACACATGTAAGTTATTGAACCAACATTATGCCCTTATTAATTATATCCTCTTTCGTTATATATTTTTGCGTTACTTAACTTAGTTTTTAAAATTGTTGCAGAATCAAATGCTGGAACTCCAGTCCCAGCCTACCTTAGAGGGTAGCCCTGGGGATGAGATATGCGATCAAGTGTTGGGTAGACGATCAAGCTACTCGAAAGGCCTTGGTTGGGGACTCAAGTCGAAGGCCCGCAAGACAACGAGTGCAAGCAATTCCATGACATCTTGTTTGTCGTCCACACAAAAAGAGATTGAATTACAATCTTAACATAATGAAGCTTTGGAACGTATTGAAGTGCAAAATAGAAATCACGCAACATTAGCTTCACAAGTGGAACGAATGCAATAGTTGATAGAAGACTTGACTCGGGCACAGCAAGGACCACCCCACGATCCCTAACTTTGTGGTACGTATATATATGTCCATTATTCTTAAGTTTTTGCAATGATAGTATACAGTGAACATATGGATATATGTACTACACTTACTTACTTTTGTATCATTATAGGATCCTGTAGAATGACGCGTACGAGCCTCGCGTTAGGAGACATACGACTTTGTTTGCCGATTTTTGTATTATGACAACTCCATTTTTTGTATTATGAACGC

mRNA sequence

ATGTCGTTTCTACAACGACAGCACGAGCTCGCTGAGAAGAAAGGGGAGTCGATCGACCGTGTGGAGTTGTTTCGAAAAATACACGTTCGAGCCGGGACGTTCGTGTCGCAGGACACAAAGGATACACATAATCAAATGCTGGAACTCCAGTCCCAGCCTACCTTAGAGGGTAGCCCTGGGGATGAGATATGCGATCAAGTGTTGGGTAGACGATCAAGCTACTCGAAAGGCCTTGGTTGGGGACTCAAGTCGAAGGCCCGCAAGACAACGAGTGCAAGCAATTCCATGACATCTTGTTTGTCGTCCACACAAAAAGAGATTGAATTACAATCTTAACATAATGAAGCTTTGGAACGTATTGAAGTGCAAAATAGAAATCACGCAACATTAGCTTCACAAGTGGAACGAATGCAATAGTTGATAGAAGACTTGACTCGGGCACAGCAAGGACCACCCCACGATCCCTAACTTTGTGGTACGTATATATATGTCCATTATTCTTAAGTTTTTGCAATGATAGTATACAGTGAACATATGGATATATGTACTACACTTACTTACTTTTGTATCATTATAGGATCCTGTAGAATGACGCGTACGAGCCTCGCGTTAGGAGACATACGACTTTGTTTGCCGATTTTTGTATTATGACAACTCCATTTTTTGTATTATGAACGC

Coding sequence (CDS)

ATGTCGTTTCTACAACGACAGCACGAGCTCGCTGAGAAGAAAGGGGAGTCGATCGACCGTGTGGAGTTGTTTCGAAAAATACACGTTCGAGCCGGGACGTTCGTGTCGCAGGACACAAAGGATACACATAATCAAATGCTGGAACTCCAGTCCCAGCCTACCTTAGAGGGTAGCCCTGGGGATGAGATATGCGATCAAGTGTTGGGTAGACGATCAAGCTACTCGAAAGGCCTTGGTTGGGGACTCAAGTCGAAGGCCCGCAAGACAACGAGTGCAAGCAATTCCATGACATCTTGTTTGTCGTCCACACAAAAAGAGATTGAATTACAATCTTAA

Protein sequence

MSFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPGDEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQS

Homology

[Close]

BLAST of MELO3C032028.jh1 vs. NCBI nr
Match: KAA0060721.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01464.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (551), Expect = 8.87e-71
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG 60
           MSFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG
Sbjct: 1   MSFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG 60

Query: 61  DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQS 111
           DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQS
Sbjct: 61  DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQS 111

[Close]

BLAST of MELO3C032028.jh1 vs. NCBI nr
Match: TYK09466.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (409), Expect = 4.01e-48
Identity = 86/112 (76.79%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQ+ELAE+KGE ++ VELFRK HVRAGTFVSQ  ++ HNQMLELQSQPT EGS   
Sbjct: 29  SFLQRQYELAERKGEPVNCVELFRKTHVRAGTFVSQAAENAHNQMLELQSQPTPEGSQPL 88

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG KSKAR+TTSAS+S TSCL ST+KEIELQ
Sbjct: 89  SEDEICDQVLGRRPGYSKGLGWGPKSKARRTTSASSSSTSCLQSTEKEIELQ 140

[Close]

BLAST of MELO3C032028.jh1 vs. NCBI nr
Match: KAA0051758.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK29453.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (404), Expect = 2.04e-47
Identity = 84/112 (75.00%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQHELAE++G+ +DRVELFR+ HVRAGTFVSQ  +D HNQMLELQSQP  EGS   
Sbjct: 25  SFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPIPEGSQPL 84

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG K KAR+T SAS+S TSC  STQKEIELQ
Sbjct: 85  SEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQ 136

[Close]

BLAST of MELO3C032028.jh1 vs. NCBI nr
Match: KAA0066976.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (411), Expect = 2.93e-47
Identity = 85/112 (75.89%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQ+ELAE+KG+ +DRVELF++ HVRAGTFVSQ T+D HNQMLELQSQPT EGS   
Sbjct: 148 SFLQRQYELAERKGQPVDRVELFQETHVRAGTFVSQATEDAHNQMLELQSQPTPEGSQPL 207

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG K KAR+T SAS+S TSCL ST+KEIELQ
Sbjct: 208 SEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCLQSTEKEIELQ 259

[Close]

BLAST of MELO3C032028.jh1 vs. NCBI nr
Match: KAA0056994.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (404), Expect = 5.17e-47
Identity = 84/112 (75.00%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQ+ELAE++G+ +DRVELFR+ HVRAGTFVSQ  +D HNQMLELQSQPT EGS   
Sbjct: 56  SFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGSQPL 115

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG K KAR+T SAS+S TSC  STQKEIELQ
Sbjct: 116 SEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQ 167

[Close]

BLAST of MELO3C032028.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V4P9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00070 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 4.29e-71
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MSFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG 60
           MSFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG
Sbjct: 1   MSFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG 60

Query: 61  DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQS 111
           DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQS
Sbjct: 61  DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQS 111

[Close]

BLAST of MELO3C032028.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CGH0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00620 PE=4 SV=1)

HSP 1 Score: 162 bits (409), Expect = 1.94e-48
Identity = 86/112 (76.79%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQ+ELAE+KGE ++ VELFRK HVRAGTFVSQ  ++ HNQMLELQSQPT EGS   
Sbjct: 29  SFLQRQYELAERKGEPVNCVELFRKTHVRAGTFVSQAAENAHNQMLELQSQPTPEGSQPL 88

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG KSKAR+TTSAS+S TSCL ST+KEIELQ
Sbjct: 89  SEDEICDQVLGRRPGYSKGLGWGPKSKARRTTSASSSSTSCLQSTEKEIELQ 140

[Close]

BLAST of MELO3C032028.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E080 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00460 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 9.87e-48
Identity = 84/112 (75.00%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQHELAE++G+ +DRVELFR+ HVRAGTFVSQ  +D HNQMLELQSQP  EGS   
Sbjct: 25  SFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPIPEGSQPL 84

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG K KAR+T SAS+S TSC  STQKEIELQ
Sbjct: 85  SEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQ 136

[Close]

BLAST of MELO3C032028.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VKL6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G001220 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 1.42e-47
Identity = 85/112 (75.89%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQ+ELAE+KG+ +DRVELF++ HVRAGTFVSQ T+D HNQMLELQSQPT EGS   
Sbjct: 148 SFLQRQYELAERKGQPVDRVELFQETHVRAGTFVSQATEDAHNQMLELQSQPTPEGSQPL 207

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG K KAR+T SAS+S TSCL ST+KEIELQ
Sbjct: 208 SEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCLQSTEKEIELQ 259

[Close]

BLAST of MELO3C032028.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UP71 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001760 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 2.50e-47
Identity = 84/112 (75.00%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 2   SFLQRQHELAEKKGESIDRVELFRKIHVRAGTFVSQDTKDTHNQMLELQSQPTLEGSPG- 61
           SFLQRQ+ELAE++G+ +DRVELFR+ HVRAGTFVSQ  +D HNQMLELQSQPT EGS   
Sbjct: 56  SFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPTPEGSQPL 115

Query: 62  --DEICDQVLGRRSSYSKGLGWGLKSKARKTTSASNSMTSCLSSTQKEIELQ 110
             DEICDQVLGRR  YSKGLGWG K KAR+T SAS+S TSC  STQKEIELQ
Sbjct: 116 SEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIELQ 167

The following BLAST results are available for this feature:

BLAST of MELO3C032028.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060721.1	8.87e-71	100.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01464.1 CACTA en-...	[more]
TYK09466.1	4.01e-48	76.79	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0051758.1	2.04e-47	75.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK29453.1 CACTA en-...	[more]
KAA0066976.1	2.93e-47	75.89	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0056994.1	5.17e-47	75.00	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C032028.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C032028.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4P9	4.29e-71	100.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3CGH0	1.94e-48	76.79	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3E080	9.87e-48	75.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7VKL6	1.42e-47	75.89	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7UP71	2.50e-47	75.00	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MELO3C032028.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032028.jh1.t1	MELO3C032028.jh1.t1	mRNA