MELO3C032027.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C032027.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCACTA en-spm transposon protein
Locationchr06: 14163723 .. 14164494 (+)
RNA-Seq ExpressionMELO3C032027.jh1
SyntenyMELO3C032027.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTTTGTATTTACTTATTCAATTTTTGTTTTCTATGTCCACATGCATTATGTCGTCGTCATATCCACGTCATAATTTTTTGGAGACGGATACTATGTTCCTCGAGTTAGATAACTTTGCGGGAGGGTCGTCGTCAGTCGACGACAATGTGGGTGAGTATAATAGTTTCTTTCATTTTAACTTACGATTATTTCATTTTTTTCTCCAACACTATATGTTATTATCGATTTATTGAGCAGGATCGTCTTTTCAACAACCTAGGACTCCAACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTGGAGCGCCACGTTGCAGTACATGGACGCATTCCGATGACGATCGCCCCTGGTACGAAGAAACCTATTTCTCCACACGCCGTTCGCTTCAACCAAGCGATAGGCGTGCGCGAGTGAAAGACATTTTCCGTCTGCTGCCTTAAGTGGACGGACGCGGATGGACGTTGGCAGAGAATACATTGAAGGTTGTCAAGGGCAACCTCCAGGTAATTAAGTCCACTACACATTCATGATTTCATTTGAAACATATTTAAGTTAAGCAATCTAATGTGTTATTTTTGTAATGTGTAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCACCACCTCTAAAAAGTTTTGGGCCTACTGTCACAAACACTTTAAAAAGTACAGCGACCCCGAGGAGGCTCATGCCAACCTACCAAACATATTGGTTGGACGTTATGAGGATTGA

mRNA sequence

GTGTTTGTATTTACTTATTCAATTTTTGTTTTCTATGTCCACATGCATTATGTCGTCGTCATATCCACGTCATAATTTTTTGGAGACGGATACTATGTTCCTCGAGTTAGATAACTTTGCGGGAGGGTCGTCGTCAGTCGACGACAATGTGGGATCGTCTTTTCAACAACCTAGGACTCCAACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTGGAGCGCCACGTTGCAGTACATGGACGCATTCCGATGACGATCGCCCCTGTGGACGGACGCGGATGGACGTTGGCAGAGAATACATTGAAGGTTGTCAAGGGCAACCTCCAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCACCACCTCTAAAAAGTTTTGGGCCTACTGTCACAAACACTTTAAAAAGTACAGCGACCCCGAGGAGGCTCATGCCAACCTACCAAACATATTGGTTGGACGTTATGAGGATTGA

Coding sequence (CDS)

ATGTCCACATGCATTATGTCGTCGTCATATCCACGTCATAATTTTTTGGAGACGGATACTATGTTCCTCGAGTTAGATAACTTTGCGGGAGGGTCGTCGTCAGTCGACGACAATGTGGGATCGTCTTTTCAACAACCTAGGACTCCAACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTGGAGCGCCACGTTGCAGTACATGGACGCATTCCGATGACGATCGCCCCTGTGGACGGACGCGGATGGACGTTGGCAGAGAATACATTGAAGGTTGTCAAGGGCAACCTCCAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCACCACCTCTAAAAAGTTTTGGGCCTACTGTCACAAACACTTTAAAAAGTACAGCGACCCCGAGGAGGCTCATGCCAACCTACCAAACATATTGGTTGGACGTTATGAGGATTGA

Protein sequence

MSTCIMSSSYPRHNFLETDTMFLELDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGRIPMTIAPVDGRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDPEEAHANLPNILVGRYED
Homology
BLAST of MELO3C032027.jh1 vs. NCBI nr
Match: KAA0060720.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01463.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 285 bits (728), Expect = 1.39e-96
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query: 21  MFLELDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGRIPMTIAPVD 80
           MFLELDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGRIPMTIAPVD
Sbjct: 1   MFLELDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGRIPMTIAPVD 60

Query: 81  GRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDP 140
           GRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDP
Sbjct: 61  GRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDP 120

Query: 141 EEAHANLPNILVGRYED 157
           EEAHANLPNILVGRYED
Sbjct: 121 EEAHANLPNILVGRYED 137

BLAST of MELO3C032027.jh1 vs. NCBI nr
Match: KAA0038905.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (507), Expect = 2.61e-62
Identity = 109/152 (71.71%), Postives = 119/152 (78.29%), Query Frame = 0

Query: 16  LETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGR 75
           +ETD MFL+    LDN AGGSSSV DN GSS QQ  T TPRRRAQSRLLELERHVA++GR
Sbjct: 1   METDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQT-TSTPRRRAQSRLLELERHVAINGR 60

Query: 76  IPMTIAP-----VDGRGWT-LAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKK 135
           IPMTIAP     +    WT +    ++VVKG+LQRFFVLDFNDQAMNRFVEHQMLTT K+
Sbjct: 61  IPMTIAPGAEKPISPHAWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKE 120

Query: 136 FWAYCHKHFKKYSDPEEAHANLPNILVGRYED 157
           F A CHKHFKKYSDPEEA AN PN LVGR ED
Sbjct: 121 FRADCHKHFKKYSDPEEARANPPNALVGRDED 151

BLAST of MELO3C032027.jh1 vs. NCBI nr
Match: TYJ99698.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 200 bits (508), Expect = 1.43e-60
Identity = 113/187 (60.43%), Postives = 125/187 (66.84%), Query Frame = 0

Query: 2   STCIMSSSYPRHNFLETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQS 61
           S  ++  SY R +F+ETD MFL+    LDN AGGSSSV DN   S  Q  TPTPRRRAQS
Sbjct: 88  SATLVIMSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQS 147

Query: 62  RLLELERHVAVHGRIPMTIAP--------------------------VDGRGWT-LAENT 121
           RLLELERHVA++GRIPMTIAP                          V    WT +    
Sbjct: 148 RLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREY 207

Query: 122 LKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDPEEAHANLPNI 157
           ++VVKG+LQRFFVLDFNDQAMNRFVEHQMLTT K+F A CHKHFKKYSDPEEA AN PN 
Sbjct: 208 IEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNA 267

BLAST of MELO3C032027.jh1 vs. NCBI nr
Match: KAA0041610.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK19647.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (506), Expect = 4.36e-60
Identity = 107/155 (69.03%), Postives = 119/155 (76.77%), Query Frame = 0

Query: 1   MSTCIMSSSYPRHNFLETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQ 60
           M+TCIMSSSYP HNFLE DTMFLE    LDN  GGSS       SS QQP TPTPRR  Q
Sbjct: 104 MNTCIMSSSYPCHNFLEIDTMFLEFQDELDNLTGGSSWWV--TISSSQQPMTPTPRRYVQ 163

Query: 61  SRLLELERHVAVHGRIPMTIAPVDGRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVE 120
           S+LLELERH+AVHGRIPMTIA   GR +      ++VVK +LQRFFVL+FNDQAMNRFVE
Sbjct: 164 SQLLELERHIAVHGRIPMTIASEVGREY------IEVVKDDLQRFFVLNFNDQAMNRFVE 223

Query: 121 HQMLTTSKKFWAYCHKHFKKYSDPEEAHANLPNIL 151
           HQ+LTT K+FW  CH+HFKKYS+PEEA  N PNIL
Sbjct: 224 HQILTTFKEFWVDCHRHFKKYSEPEEARGNPPNIL 250

BLAST of MELO3C032027.jh1 vs. NCBI nr
Match: KAA0062622.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 191 bits (484), Expect = 3.22e-59
Identity = 102/151 (67.55%), Postives = 115/151 (76.16%), Query Frame = 0

Query: 16  LETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGR 75
           +ETD MFL+    LDN AGGSSSV DN GSS QQ  TPTPR+RAQSRLLELERHV ++GR
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTGSSSQQT-TPTPRKRAQSRLLELERHVTINGR 60

Query: 76  IPMTIAP-----VDGRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKF 135
           IPMTIAP     +      +    ++VVKG+LQR FV+DFNDQAMNRFVEHQMLTT K+F
Sbjct: 61  IPMTIAPGTEKPISPHWADIGREYIEVVKGDLQRLFVIDFNDQAMNRFVEHQMLTTFKEF 120

Query: 136 WAYCHKHFKKYSDPEEAHANLPNILVGRYED 157
              CH+HFKKYSDPEEA AN PN LVGR ED
Sbjct: 121 RTDCHRHFKKYSDPEEARANPPNALVGRDED 150

BLAST of MELO3C032027.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V073 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00060 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 6.73e-97
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query: 21  MFLELDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGRIPMTIAPVD 80
           MFLELDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGRIPMTIAPVD
Sbjct: 1   MFLELDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGRIPMTIAPVD 60

Query: 81  GRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDP 140
           GRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDP
Sbjct: 61  GRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDP 120

Query: 141 EEAHANLPNILVGRYED 157
           EEAHANLPNILVGRYED
Sbjct: 121 EEAHANLPNILVGRYED 137

BLAST of MELO3C032027.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TBZ0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00730 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 1.26e-62
Identity = 109/152 (71.71%), Postives = 119/152 (78.29%), Query Frame = 0

Query: 16  LETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGR 75
           +ETD MFL+    LDN AGGSSSV DN GSS QQ  T TPRRRAQSRLLELERHVA++GR
Sbjct: 1   METDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQT-TSTPRRRAQSRLLELERHVAINGR 60

Query: 76  IPMTIAP-----VDGRGWT-LAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKK 135
           IPMTIAP     +    WT +    ++VVKG+LQRFFVLDFNDQAMNRFVEHQMLTT K+
Sbjct: 61  IPMTIAPGAEKPISPHAWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKE 120

Query: 136 FWAYCHKHFKKYSDPEEAHANLPNILVGRYED 157
           F A CHKHFKKYSDPEEA AN PN LVGR ED
Sbjct: 121 FRADCHKHFKKYSDPEEARANPPNALVGRDED 151

BLAST of MELO3C032027.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BNG3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00960 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 6.95e-61
Identity = 113/187 (60.43%), Postives = 125/187 (66.84%), Query Frame = 0

Query: 2   STCIMSSSYPRHNFLETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQS 61
           S  ++  SY R +F+ETD MFL+    LDN AGGSSSV DN   S  Q  TPTPRRRAQS
Sbjct: 88  SATLVIMSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQS 147

Query: 62  RLLELERHVAVHGRIPMTIAP--------------------------VDGRGWT-LAENT 121
           RLLELERHVA++GRIPMTIAP                          V    WT +    
Sbjct: 148 RLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREY 207

Query: 122 LKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKFWAYCHKHFKKYSDPEEAHANLPNI 157
           ++VVKG+LQRFFVLDFNDQAMNRFVEHQMLTT K+F A CHKHFKKYSDPEEA AN PN 
Sbjct: 208 IEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNA 267

BLAST of MELO3C032027.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TE89 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00360 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 2.11e-60
Identity = 107/155 (69.03%), Postives = 119/155 (76.77%), Query Frame = 0

Query: 1   MSTCIMSSSYPRHNFLETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQ 60
           M+TCIMSSSYP HNFLE DTMFLE    LDN  GGSS       SS QQP TPTPRR  Q
Sbjct: 104 MNTCIMSSSYPCHNFLEIDTMFLEFQDELDNLTGGSSWWV--TISSSQQPMTPTPRRYVQ 163

Query: 61  SRLLELERHVAVHGRIPMTIAPVDGRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVE 120
           S+LLELERH+AVHGRIPMTIA   GR +      ++VVK +LQRFFVL+FNDQAMNRFVE
Sbjct: 164 SQLLELERHIAVHGRIPMTIASEVGREY------IEVVKDDLQRFFVLNFNDQAMNRFVE 223

Query: 121 HQMLTTSKKFWAYCHKHFKKYSDPEEAHANLPNIL 151
           HQ+LTT K+FW  CH+HFKKYS+PEEA  N PNIL
Sbjct: 224 HQILTTFKEFWVDCHRHFKKYSEPEEARGNPPNIL 250

BLAST of MELO3C032027.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V322 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001320 PE=4 SV=1)

HSP 1 Score: 191 bits (484), Expect = 1.56e-59
Identity = 102/151 (67.55%), Postives = 115/151 (76.16%), Query Frame = 0

Query: 16  LETDTMFLE----LDNFAGGSSSVDDNVGSSFQQPRTPTPRRRAQSRLLELERHVAVHGR 75
           +ETD MFL+    LDN AGGSSSV DN GSS QQ  TPTPR+RAQSRLLELERHV ++GR
Sbjct: 1   METDDMFLQFEDDLDNIAGGSSSVGDNTGSSSQQT-TPTPRKRAQSRLLELERHVTINGR 60

Query: 76  IPMTIAP-----VDGRGWTLAENTLKVVKGNLQRFFVLDFNDQAMNRFVEHQMLTTSKKF 135
           IPMTIAP     +      +    ++VVKG+LQR FV+DFNDQAMNRFVEHQMLTT K+F
Sbjct: 61  IPMTIAPGTEKPISPHWADIGREYIEVVKGDLQRLFVIDFNDQAMNRFVEHQMLTTFKEF 120

Query: 136 WAYCHKHFKKYSDPEEAHANLPNILVGRYED 157
              CH+HFKKYSDPEEA AN PN LVGR ED
Sbjct: 121 RTDCHRHFKKYSDPEEARANPPNALVGRDED 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0060720.11.39e-96100.00CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK01463.1 CACTA en-... [more]
KAA0038905.12.61e-6271.71CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYJ99698.11.43e-6060.43CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0041610.14.36e-6069.03CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK19647.1 CACTA en-... [more]
KAA0062622.13.22e-5967.55CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V0736.73e-97100.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TBZ01.26e-6271.71CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BNG36.95e-6160.43CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TE892.11e-6069.03CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7V3221.56e-5967.55CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032027.jh1.t1MELO3C032027.jh1.t1mRNA