MELO3C032021 (gene) Melon (DHL92) v4

Overview
NameMELO3C032021
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionKinesin light chain 3 isoform X1
Locationchr06: 13257269 .. 13258338 (-)
RNA-Seq ExpressionMELO3C032021
SyntenyMELO3C032021
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAGCTTCCAAGCAAACTCGCTTAAGTCCTCCTTAAGCATGTCACATTGCCCATGCCATACTTAACCATGCCGTTTAGTCCCTTTGGTCGAGCCATAAGCTTGCTTCTTATGTCTTGTCGTCTAATCATGTCTTAGCACAACATAACGCCTAGGGCATTTGAAATCCCTTTTCTTAGCTGTCTAGGACAACCTCCTAGATCCTTTAATGCTCATCTCACCTAACAGAATACTTGGCCAAATATCACCTCCCCTTACTTTGGTCGCCTAGATATTCAAATGGTCATTCTTCACGCCATACTTAGACACTATTTTGGCCGCATAGAGGTTGTGTTGGTCTTTGGCCGCATGACACCCTCTTACTCACCTAGCCAACAAGTTAACCAATTTTCCACACACTCCTCCTCTTTTGGCCGCATACATCAACTCTTTAAGCCTTGTCAACCTTGCTTGGGTGCAAACCTAAGGATCACACACATAACACTAAGACTATATTCCTACAAATTTCAACCATCTCACTTTGCCATAATTCCCTTTCCTAACCTTAATTAACTCTTCATCAAAGAATTTAGCAACAATAAAACCAAATTTTATAAAATCATTGAACTAAAGAAATAGCAAGGCTAAGGGTTTACATGATTACAATTACACTTTAAACTTTTATTTATAAAGATTGATTCCTCAAACTCATACCAACATTAGAAATGGACCATCGAACTTACGCAACCGTACAAATTATAACAATCATTTAAGTGTGATGGATCAACTTTGTTATTGTTTAATGTTTTATTTTTTTATTTTTTATTCTGTTTTTTATTTTCTGTTTACTCTTTTTAAGAGTAAGGAAAACCGTACCGTACAGCTAAAACCCCTTTAAACCCTTCTCGTCTTCCTCTCCACCTACCTTCCATTCTATTCCATATCACTCGAGGCAAAGCAGAGATGTACACCAGACAAGCAGCTTCAAAATGGTTAAAGAGATTAAGCTTTCGCTCTACAGCATTTCATCTCACTTCGGAAGCTCCCAATCTTCCTAACGTATCAATCTTCTCTTCTCGCTGTACGTAA

mRNA sequence

ATGCCTAGCTTCCAAGCAAACTCGCTTAAGTCCTCCTTAAGCATATTGATTCCTCAAACTCATACCAACATTAGAAATGGACCATCGAACTTACGCAACCGTACAAATTATAACAATCATTTAAGAAAACCGTACCGTACAGCTAAAACCCCTTTAAACCCTTCTCGTCTTCCTCTCCACCTACCTTCCATTCTATTCCATATCACTCGAGGCAAAGCAGAGATGTACACCAGACAAGCAGCTTCAAAATGGTTAAAGAGATTAAGCTTTCGCTCTACAGCATTTCATCTCACTTCGGAAGCTCCCAATCTTCCTAACGTATCAATCTTCTCTTCTCGCTGTACGTAA

Coding sequence (CDS)

ATGCCTAGCTTCCAAGCAAACTCGCTTAAGTCCTCCTTAAGCATATTGATTCCTCAAACTCATACCAACATTAGAAATGGACCATCGAACTTACGCAACCGTACAAATTATAACAATCATTTAAGAAAACCGTACCGTACAGCTAAAACCCCTTTAAACCCTTCTCGTCTTCCTCTCCACCTACCTTCCATTCTATTCCATATCACTCGAGGCAAAGCAGAGATGTACACCAGACAAGCAGCTTCAAAATGGTTAAAGAGATTAAGCTTTCGCTCTACAGCATTTCATCTCACTTCGGAAGCTCCCAATCTTCCTAACGTATCAATCTTCTCTTCTCGCTGTACGTAA

Protein sequence

MPSFQANSLKSSLSILIPQTHTNIRNGPSNLRNRTNYNNHLRKPYRTAKTPLNPSRLPLHLPSILFHITRGKAEMYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRCT
Homology
BLAST of MELO3C032021 vs. NCBI nr
Match: TYK14053.1 (kinesin light chain 3 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

BLAST of MELO3C032021 vs. NCBI nr
Match: KAA0047377.1 (kinesin light chain 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

BLAST of MELO3C032021 vs. NCBI nr
Match: XP_008457118.2 (PREDICTED: uncharacterized protein LOC103496867 [Cucumis melo])

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

BLAST of MELO3C032021 vs. NCBI nr
Match: XP_011651210.1 (uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus] >KAE8650481.1 hypothetical protein Csa_011670 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-10
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFH TS APN PNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRC 40

BLAST of MELO3C032021 vs. NCBI nr
Match: XP_031738901.1 (uncharacterized protein LOC101207905 isoform X2 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-10
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFH TS APN PNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRC 40

BLAST of MELO3C032021 vs. ExPASy TrEMBL
Match: A0A5A7TZJ1 (Kinesin light chain 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold754G00320 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.0e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

BLAST of MELO3C032021 vs. ExPASy TrEMBL
Match: A0A5D3CQC2 (Kinesin light chain 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00300 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.0e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

BLAST of MELO3C032021 vs. ExPASy TrEMBL
Match: A0A1S3C5G7 (uncharacterized protein LOC103496867 OS=Cucumis melo OX=3656 GN=LOC103496867 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.0e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 40

BLAST of MELO3C032021 vs. ExPASy TrEMBL
Match: A0A0A0LA19 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G187310 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.3e-11
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTRQAASKWLKRLSFRSTAFH TS APN PNVSIFSSRC
Sbjct: 1   MYTRQAASKWLKRLSFRSTAFHHTSGAPNFPNVSIFSSRC 40

BLAST of MELO3C032021 vs. ExPASy TrEMBL
Match: A0A6J1KEU5 (uncharacterized protein LOC111492620 OS=Cucurbita maxima OX=3661 GN=LOC111492620 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.8e-07
Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 75  MYTRQAASKWLKRLSFRSTAFHLTSEAPNLPNVSIFSSRC 115
           MYTR AASKWLKRLSFRSTAF+ TSE P   NV IFSSRC
Sbjct: 1   MYTRTAASKWLKRLSFRSTAFNRTSETPTSINVPIFSSRC 40

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK14053.11.2e-12100.00kinesin light chain 3 [Cucumis melo var. makuwa][more]
KAA0047377.11.2e-12100.00kinesin light chain 3 isoform X1 [Cucumis melo var. makuwa][more]
XP_008457118.21.2e-12100.00PREDICTED: uncharacterized protein LOC103496867 [Cucumis melo][more]
XP_011651210.11.5e-1092.50uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus] >KAE8650481.1 ... [more]
XP_031738901.11.5e-1092.50uncharacterized protein LOC101207905 isoform X2 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZJ16.0e-13100.00Kinesin light chain 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5D3CQC26.0e-13100.00Kinesin light chain 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold36... [more]
A0A1S3C5G76.0e-13100.00uncharacterized protein LOC103496867 OS=Cucumis melo OX=3656 GN=LOC103496867 PE=... [more]
A0A0A0LA197.3e-1192.50TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G187310 ... [more]
A0A6J1KEU53.8e-0780.00uncharacterized protein LOC111492620 OS=Cucurbita maxima OX=3661 GN=LOC111492620... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032021.1MELO3C032021.1mRNA