MELO3C031971 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031971
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Xanthine dehydrogenase
Location	chr06: 34702937 .. 34703098 (+)
RNA-Seq Expression	MELO3C031971
Synteny	MELO3C031971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGGTGCTCTAGTTCATGTCTATACTGATGGGACAGTTTTAGTTACGCATGGAGGTGTTGAAATGGGCCAAGGATTGCATACAAAAGTTGCACAGGTTGCTGCTTCTGCCTTTAATATTCCTCTAAGTTCTGTCTTCATATCAGAGACAAGTACGGACAAG

mRNA sequence

GCAGGTGCTCTAGTTCATGTCTATACTGATGGGACAGTTTTAGTTACGCATGGAGGTGTTGAAATGGGCCAAGGATTGCATACAAAAGTTGCACAGGTTGCTGCTTCTGCCTTTAATATTCCTCTAAGTTCTGTCTTCATATCAGAGACAAGTACGGACAAG

Coding sequence (CDS)

ATGGGCCAAGGATTGCATACAAAAGTTGCACAGGTTGCTGCTTCTGCCTTTAATATTCCTCTAAGTTCTGTCTTCATATCAGAGACAAGTACGGACAAG

Protein sequence

MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK

Homology

[Close]

BLAST of MELO3C031971 vs. NCBI nr
Match: XP_039014311.1 (xanthine dehydrogenase 1-like isoform X1 [Hibiscus syriacus] >XP_039014312.1 xanthine dehydrogenase 1-like isoform X1 [Hibiscus syriacus])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1074 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1106

[Close]

BLAST of MELO3C031971 vs. NCBI nr
Match: KAB2012958.1 (hypothetical protein ES319_D09G125700v1 [Gossypium barbadense])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1069 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1101

[Close]

BLAST of MELO3C031971 vs. NCBI nr
Match: TYJ18452.1 (hypothetical protein E1A91_A09G124400v1 [Gossypium mustelinum] >TYJ18453.1 hypothetical protein E1A91_A09G124400v1 [Gossypium mustelinum])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1078 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1110

[Close]

BLAST of MELO3C031971 vs. NCBI nr
Match: XP_016900884.1 (PREDICTED: xanthine dehydrogenase 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1074 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1106

[Close]

BLAST of MELO3C031971 vs. NCBI nr
Match: KAF9844037.1 (hypothetical protein H0E87_018280 [Populus deltoides])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1074 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1106

[Close]

BLAST of MELO3C031971 vs. ExPASy Swiss-Prot
Match: Q8GUQ8 (Xanthine dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=XDH1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-10
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVF+SETSTDK
Sbjct: 1067 MGQGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1099

[Close]

BLAST of MELO3C031971 vs. ExPASy Swiss-Prot
Match: Q6AUV1 (Xanthine dehydrogenase OS=Oryza sativa subsp. japonica OX=39947 GN=XDH PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-10
Identity = 31/33 (93.94%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAAS+FNIPLSS+FISETSTDK
Sbjct: 1075 MGQGLHTKVAQVAASSFNIPLSSIFISETSTDK 1107

[Close]

BLAST of MELO3C031971 vs. ExPASy Swiss-Prot
Match: F4JLI5 (Xanthine dehydrogenase 2 OS=Arabidopsis thaliana OX=3702 GN=XDH2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.4e-09
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAA+AFNI LSSVF+SETSTDK
Sbjct: 1059 MGQGLHTKVAQVAATAFNILLSSVFVSETSTDK 1091

[Close]

BLAST of MELO3C031971 vs. ExPASy Swiss-Prot
Match: Q54FB7 (Xanthine dehydrogenase OS=Dictyostelium discoideum OX=44689 GN=xdh PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.2e-07
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGL+TK+ Q+AA AFN+P+S VFISETSTDK
Sbjct: 1076 MGQGLNTKMIQIAARAFNVPVSDVFISETSTDK 1108

[Close]

BLAST of MELO3C031971 vs. ExPASy Swiss-Prot
Match: P80457 (Xanthine dehydrogenase/oxidase OS=Bos taurus OX=9913 GN=XDH PE=1 SV=4)

HSP 1 Score: 47.0 bits (110), Expect = 4.8e-05
Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTD 33
            MGQGLHTK+ QVA+ A  IP+S ++ISETST+
Sbjct: 1038 MGQGLHTKMVQVASKALKIPISKIYISETSTN 1069

[Close]

BLAST of MELO3C031971 vs. ExPASy TrEMBL
Match: A0A1U8I0M1 (xanthine dehydrogenase 1-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107889340 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.3e-08
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1076 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1108

[Close]

BLAST of MELO3C031971 vs. ExPASy TrEMBL
Match: A0A1U8I0A5 (xanthine dehydrogenase 1-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107891396 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.3e-08
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1074 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1106

[Close]

BLAST of MELO3C031971 vs. ExPASy TrEMBL
Match: A0A6J1JID1 (xanthine dehydrogenase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485375 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.3e-08
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1074 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1106

[Close]

BLAST of MELO3C031971 vs. ExPASy TrEMBL
Match: M5WMJ2 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G245700 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.3e-08
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1075 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1107

[Close]

BLAST of MELO3C031971 vs. ExPASy TrEMBL
Match: A0A6P4LVN7 (xanthine dehydrogenase 1-like isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC108456712 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.3e-08
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK
Sbjct: 1076 MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 1108

[Close]

BLAST of MELO3C031971 vs. TAIR 10
Match: AT4G34890.1 (xanthine dehydrogenase 1 )

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-11
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAASAFNIPLSSVF+SETSTDK
Sbjct: 1067 MGQGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1099

[Close]

BLAST of MELO3C031971 vs. TAIR 10
Match: AT4G34900.1 (xanthine dehydrogenase 2 )

HSP 1 Score: 59.3 bits (142), Expect = 6.7e-10
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 1    MGQGLHTKVAQVAASAFNIPLSSVFISETSTDK 34
            MGQGLHTKVAQVAA+AFNI LSSVF+SETSTDK
Sbjct: 1059 MGQGLHTKVAQVAATAFNILLSSVFVSETSTDK 1091

[Close]

BLAST of MELO3C031971 vs. TAIR 10
Match: AT4G31196.1 (oxidoreductases )

HSP 1 Score: 41.2 bits (95), Expect = 1.9e-04
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0


Query: 5  LHTKVAQVAASAFNIPLSSVFISETSTDK 34
          LHTK   VAA+AFNIPLSSVF+SETST K
Sbjct: 10 LHTK---VAATAFNIPLSSVFVSETSTYK 35

[Close]

BLAST of MELO3C031971 vs. TAIR 10
Match: AT3G04390.1 (Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein )

HSP 1 Score: 40.4 bits (93), Expect = 3.2e-04
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0


Query: 5  LHTKVAQVAASAFNIPLSSVFISETSTDK 34
          +HTK   VAA+AFNIPLSSVF+SETST K
Sbjct: 10 MHTK---VAAAAFNIPLSSVFVSETSTYK 35

The following BLAST results are available for this feature:

BLAST of MELO3C031971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_039014311.1	1.7e-07	100.00	xanthine dehydrogenase 1-like isoform X1 [Hibiscus syriacus] >XP_039014312.1 xan...	[more]
KAB2012958.1	1.7e-07	100.00	hypothetical protein ES319_D09G125700v1 [Gossypium barbadense]	[more]
TYJ18452.1	1.7e-07	100.00	hypothetical protein E1A91_A09G124400v1 [Gossypium mustelinum] >TYJ18453.1 hypot...	[more]
XP_016900884.1	1.7e-07	100.00	PREDICTED: xanthine dehydrogenase 1-like isoform X3 [Cucumis melo]	[more]
KAF9844037.1	1.7e-07	100.00	hypothetical protein H0E87_018280 [Populus deltoides]	[more]

BLAST of MELO3C031971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUQ8	2.9e-10	96.97	Xanthine dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=XDH1 PE=1 SV=1	[more]
Q6AUV1	6.5e-10	93.94	Xanthine dehydrogenase OS=Oryza sativa subsp. japonica OX=39947 GN=XDH PE=2 SV=1	[more]
F4JLI5	9.4e-09	90.91	Xanthine dehydrogenase 2 OS=Arabidopsis thaliana OX=3702 GN=XDH2 PE=2 SV=1	[more]
Q54FB7	5.2e-07	75.76	Xanthine dehydrogenase OS=Dictyostelium discoideum OX=44689 GN=xdh PE=3 SV=1	[more]
P80457	4.8e-05	65.63	Xanthine dehydrogenase/oxidase OS=Bos taurus OX=9913 GN=XDH PE=1 SV=4	[more]

BLAST of MELO3C031971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8I0M1	8.3e-08	100.00	xanthine dehydrogenase 1-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107...	[more]
A0A1U8I0A5	8.3e-08	100.00	xanthine dehydrogenase 1-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107...	[more]
A0A6J1JID1	8.3e-08	100.00	xanthine dehydrogenase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
M5WMJ2	8.3e-08	100.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G245700 PE=3 SV=1	[more]
A0A6P4LVN7	8.3e-08	100.00	xanthine dehydrogenase 1-like isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC10...	[more]

BLAST of MELO3C031971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34890.1	2.1e-11	96.97	xanthine dehydrogenase 1	[more]
AT4G34900.1	6.7e-10	90.91	xanthine dehydrogenase 2	[more]
AT4G31196.1	1.9e-04	79.31	oxidoreductases	[more]
AT3G04390.1	3.2e-04	75.86	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008274	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding	PFAM	PF02738	Ald_Xan_dh_C2	coord: 1..33 e-value: 7.1E-9 score: 34.7
None	No IPR available	GENE3D	3.30.365.10	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain	coord: 1..33 e-value: 6.5E-11 score: 44.3
None	No IPR available	PANTHER	PTHR11908:SF144	BNAA09G00610D PROTEIN	coord: 1..33
IPR016208	Aldehyde oxidase/xanthine dehydrogenase	PANTHER	PTHR11908	XANTHINE DEHYDROGENASE	coord: 1..33
IPR037165	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily	SUPERFAMILY	56003	Molybdenum cofactor-binding domain	coord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031971.1	MELO3C031971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity