MELO3C031943 (gene) Melon (DHL92) v4

Overview
NameMELO3C031943
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptionaspartyl protease APCB1
Locationchr06: 10578487 .. 10579558 (-)
RNA-Seq ExpressionMELO3C031943
SyntenyMELO3C031943
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGTGGTTGCGCCGATTTTCGTCGAACATCGATTTGTCTTGTCGAACGTCACTCCGTTGAACGTCTTGCCGAACGTCGTTTGGTGGTCGCGCCGTTTAGTGGTTGTGGCCGACGTCATCTTCCGTCTTCGACCGTATTGAGTTCGCTGTCCACTGGGCTTATCATCCGGTCGTCTCACATTAATTTGTCGAGGGAGCTTTTTGCTGGCACTCCTAGGAAGCTTGTTGTCGTAGTAGGCATTGCCCTCATTGCTGTTTATCTTTATGCTTCTAATTTTCCGAAGACCATTCAGGAGTTGCATCGTTCTAAGAAGAACGATGACGATGTACTTGGAGTTTTGAAGCCTAGTTGGAGTTTCCCCTTTATTTCCAATCGAAGTTGGGTGAGATTTCCAGCTTAAGTTGGGTAGGACTGTTCGTGTAAATAAGGATGATTTGGGTGTAAGATTTACTATGTACTTGGAGTTTTGAAGCCTAGTAAATTGATTTCTGCCTCTTTAAAGTCTGATTCATCAGTCGTATTTTCTATGCGGGGAGATATCTATCCAGATGGGTATGTTTTTATCTTGTCTTCTTCATATTTTTACTTTATGTTCGGTGATGAATACGTCAATCGTCACCCATTCCAAGATATTGCTTTGAGTTTTTAGCTTAAAGTAGTTGAACACTGAAATACTTTTTGAAAGCTTTTTTTTTATCGGAAGATCAAGAAGAATGAATAACAAGGTACTTTAGCAGGGGAAGAATAAACGACTAGAAAAATAAATATTCATGGTCCAGCAAAGCTGATGTTGCATCGTTAAAAACCTTGGCTTATACCAAAAGTCAAACTTTTCAATTGACTTGAAAATAATGATGTGGGTTACTTAATGCCACTTTGAATGACCAAGAAATTATGTAGCACAACTAAATAAGCCACATAGAGATATGATTATACCGTTTCTGACTGTAAATTAGGATTCTCAAGTTTATGCATCTAAATTCTGGTCATTTTGTTTAGATAGCATACAATGTTTGTCATGATCATGGAGATGCCTTTATTTGCACTAACATGGATTTCACCAACACATAG

mRNA sequence

GGTGTGGTTGCGCCGATTTTCGTCGAACATCGATTTGTCTTGTCGAACGTCACTCCGTTGAACGTCTTGCCGAACGTCGTTTGGTGGTCGCGCCGTTTAGTGGTTGTGGCCGACGTCATCTTCCGTCTTCGACCGTATTGAGTTCGCTGTCCACTGGGCTTATCATCCGGTCGTCTCACATTAATTTGTCGAGGGAGCTTTTTGCTGGCACTCCTAGGAAGCTTGTTGTCGTAGTAGGCATTGCCCTCATTGCTGTTTATCTTTATGCTTCTAATTTTCCGAAGACCATTCAGGAGTTGCATCGTTCTAAGAAGAACGATGACGATGTACTTGGAGTTTTGAAGCCTAGTTGGAGTTTCCCCTTTATTTCCAATCGAAGTTGGCCTAGTAAATTGATTTCTGCCTCTTTAAAGTCTGATTCATCAGTCGTATTTTCTATGCGGGGAGATATCTATCCAGATGGATCAAGAAGAATGAATAACAAGATAGCATACAATGTTTGTCATGATCATGGAGATGCCTTTATTTGCACTAACATGGATTTCACCAACACATAG

Coding sequence (CDS)

TGTGGTTGCGCCGATTTTCGTCGAACATCGATTTGTCTTGTCGAACGTCACTCCGTTGAACGTCTTGCCGAACGTCGTTTGGTGGTCGCGCCGTTTAGTGGTTGTGGCCGACGTCATCTTCCGTCTTCGACCGTATTGAGTTCGCTGTCCACTGGGCTTATCATCCGGTCGTCTCACATTAATTTGTCGAGGGAGCTTTTTGCTGGCACTCCTAGGAAGCTTGTTGTCGTAGTAGGCATTGCCCTCATTGCTGTTTATCTTTATGCTTCTAATTTTCCGAAGACCATTCAGGAGTTGCATCGTTCTAAGAAGAACGATGACGATGTACTTGGAGTTTTGAAGCCTAGTTGGAGTTTCCCCTTTATTTCCAATCGAAGTTGGCCTAGTAAATTGATTTCTGCCTCTTTAAAGTCTGATTCATCAGTCGTATTTTCTATGCGGGGAGATATCTATCCAGATGGATCAAGAAGAATGAATAACAAGATAGCATACAATGTTTGTCATGATCATGGAGATGCCTTTATTTGCACTAACATGGATTTCACCAACACATAG

Protein sequence

CGCADFRRTSICLVERHSVERLAERRLVVAPFSGCGRRHLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDDVLGVLKPSWSFPFISNRSWPSKLISASLKSDSSVVFSMRGDIYPDGSRRMNNKIAYNVCHDHGDAFICTNMDFTNT
Homology
[Close]
BLAST of MELO3C031943 vs. NCBI nr
Match: XP_008457584.1 (PREDICTED: aspartyl protease APCB1 isoform X2 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0 

Query: 39  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 98
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 99  LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 155
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

[Close]
BLAST of MELO3C031943 vs. NCBI nr
Match: XP_008457519.1 (PREDICTED: aspartyl protease APCB1 isoform X1 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0 

Query: 39  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 98
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 99  LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 155
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

[Close]
BLAST of MELO3C031943 vs. NCBI nr
Match: TYJ98986.1 (aspartyl protease APCB1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0 

Query: 39  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 98
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 99  LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 155
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

[Close]
BLAST of MELO3C031943 vs. NCBI nr
Match: XP_038895026.1 (aspartyl protease APCB1 [Benincasa hispida])

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-20
Identity = 64/124 (51.61%), Postives = 77/124 (62.10%), Query Frame = 0 

Query: 60  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------- 119
           I LSRELFAGTPRKLVV++GIAL+A+YLY+SNFP+T+QEL  S+KND+D           
Sbjct: 74  IPLSRELFAGTPRKLVVLLGIALVAIYLYSSNFPETLQELRSSEKNDEDRPTSLLFPLYF 133

Query: 120 ----------------VLGVLKPSWSFPF--ISNRSWPSKLISASLKSDSSVVFSMRGDI 155
                            +GV K      F  +     PSKLISA+LKSDSS VF +RGDI
Sbjct: 134 ESELGATSDFQLKLGRTVGVNKDDLGATFNDVLGVPKPSKLISATLKSDSSAVFPVRGDI 193

[Close]
BLAST of MELO3C031943 vs. NCBI nr
Match: XP_004137470.1 (aspartyl protease APCB1 [Cucumis sativus] >XP_031744952.1 aspartyl protease APCB1 [Cucumis sativus] >KGN64113.1 hypothetical protein Csa_014177 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 5.8e-20
Identity = 68/124 (54.84%), Postives = 75/124 (60.48%), Query Frame = 0 

Query: 60  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------V 119
           I LSRELFAGTPRKLV V+GIAL AVYLYASNFP+TI+EL RS++NDDD           
Sbjct: 74  IPLSRELFAGTPRKLVFVLGIALAAVYLYASNFPETIRELRRSERNDDDRPSSFLFPLYF 133

Query: 120 LGVLKPSWSFPFISNRS-------------------WPSKLISASLKSDSSVVFSMRGDI 155
              L  S  F     R+                    PSKLISASLKSDSS VF +RGDI
Sbjct: 134 QSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVPKPSKLISASLKSDSSAVFPVRGDI 193

[Close]
BLAST of MELO3C031943 vs. ExPASy TrEMBL
Match: A0A5D3BIS5 (Aspartyl protease APCB1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001890 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0 

Query: 39  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 98
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 99  LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 155
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

[Close]
BLAST of MELO3C031943 vs. ExPASy TrEMBL
Match: A0A1S3C6I2 (aspartyl protease APCB1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0 

Query: 39  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 98
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 99  LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 155
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

[Close]
BLAST of MELO3C031943 vs. ExPASy TrEMBL
Match: A0A1S3C5U5 (aspartyl protease APCB1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22
Identity = 76/145 (52.41%), Postives = 84/145 (57.93%), Query Frame = 0 

Query: 39  HLPSSTVLSSLSTGLIIRSSHINLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQE 98
           +LP  T LS  S         I LSRELFAGTPRKLV V+GIAL+AVYLYASNFP+TIQE
Sbjct: 62  NLPIQTPLSQRS---------IPLSRELFAGTPRKLVAVLGIALVAVYLYASNFPETIQE 121

Query: 99  LHRSKKNDDD---------------------------VLGVLKPSWSFPF--ISNRSWPS 155
           L RS+KNDDD                            + V K      F  +   S PS
Sbjct: 122 LRRSEKNDDDRPSSFLFPLYFQSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVSKPS 181

[Close]
BLAST of MELO3C031943 vs. ExPASy TrEMBL
Match: A0A0A0LQR7 (Peptidase A1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042250 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-20
Identity = 68/124 (54.84%), Postives = 75/124 (60.48%), Query Frame = 0 

Query: 60  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------V 119
           I LSRELFAGTPRKLV V+GIAL AVYLYASNFP+TI+EL RS++NDDD           
Sbjct: 74  IPLSRELFAGTPRKLVFVLGIALAAVYLYASNFPETIRELRRSERNDDDRPSSFLFPLYF 133

Query: 120 LGVLKPSWSFPFISNRS-------------------WPSKLISASLKSDSSVVFSMRGDI 155
              L  S  F     R+                    PSKLISASLKSDSS VF +RGDI
Sbjct: 134 QSELGDSSDFQLKLGRTVRVNKDDLGVRFNDVLGVPKPSKLISASLKSDSSAVFPVRGDI 193

[Close]
BLAST of MELO3C031943 vs. ExPASy TrEMBL
Match: A0A6J1E7R3 (aspartyl protease APCB1 OS=Cucurbita moschata OX=3662 GN=LOC111431580 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-18
Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 0 

Query: 60  INLSRELFAGTPRKLVVVVGIALIAVYLYASNFPKTIQELHRSKKNDDD----------- 119
           I LSRELFAGTPRKLVV++ IAL+A+YLY+S+FP+T+QEL  S+KNDDD           
Sbjct: 74  IPLSRELFAGTPRKLVVLLSIALVAIYLYSSSFPETLQELRSSEKNDDDRRTSLLFPLYF 133

Query: 120 ----------------VLGVLKPSWSFPF--ISNRSWPSKLISASLKSDSSVVFSMRGDI 155
                             G+ K   S  F  +     P+KLIS++LKSDSS VF +RGDI
Sbjct: 134 QSELGDSSDFQLKLGRTKGLNKDDLSAAFNDVLGVPKPTKLISSTLKSDSSAVFPVRGDI 193

The following BLAST results are available for this feature:
BLAST of MELO3C031943 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008457584.14.7e-2252.41PREDICTED: aspartyl protease APCB1 isoform X2 [Cucumis melo][more]
XP_008457519.14.7e-2252.41PREDICTED: aspartyl protease APCB1 isoform X1 [Cucumis melo][more]
TYJ98986.14.7e-2252.41aspartyl protease APCB1 isoform X2 [Cucumis melo var. makuwa][more]
XP_038895026.14.4e-2051.61aspartyl protease APCB1 [Benincasa hispida][more]
XP_004137470.15.8e-2054.84aspartyl protease APCB1 [Cucumis sativus] >XP_031744952.1 aspartyl protease APCB... [more]
BLAST of MELO3C031943 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031943 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BIS52.3e-2252.41Aspartyl protease APCB1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C6I22.3e-2252.41aspartyl protease APCB1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=4 ... [more]
A0A1S3C5U52.3e-2252.41aspartyl protease APCB1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497165 PE=4 ... [more]
A0A0A0LQR72.8e-2054.84Peptidase A1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G04225... [more]
A0A6J1E7R31.2e-1849.19aspartyl protease APCB1 OS=Cucurbita moschata OX=3662 GN=LOC111431580 PE=4 SV=1[more]
BLAST of MELO3C031943 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031943.1MELO3C031943.1mRNA