MELO3C031909 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031909
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	reactive Intermediate Deaminase A, chloroplastic-like
Location	chr06: 29443506 .. 29445478 (-)
RNA-Seq Expression	MELO3C031909
Synteny	MELO3C031909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAGGTATCAAGGAAGCTGTTCAGACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCTGAGGTAGCTTCATCTAATTGTTATTGTTATTTTCTATTTGATTGTGCTTATGAGTGTGTAGATTATGTGGGTTTTTGGATGCTGACTCGAGCATAGCTTGAAAGGTTGAATAGTTTTCATTTCTAATATTTGTAATGAAATATTGAAAGCAGAAACATAATGTTAAAGTGGGCTTCTGTATGTGCACGTTTTTAAGTTGCCTAATAGAGTGTGTTTTTATGTTCTAATGTAGACAGGGAAATTTGTCTCAGATAACGTTGAAGACCAAACGGAGCAGGTATGTCCATTGATTATGGTGTCTTCTCGTATCACCTTTGAGCTGAATATCATAAAATCTGAGTGAATGAAATTTACAGGTCCTGAAAAATATGGGCGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTTAAGACGACTATTATGTATGGAATTTTGGCCTCTTTTCTTGATGACCATAATATCCTTGCTCTGTTGATATCTGAGAACTAGGGAATTGTTTAGTAGTTGTTTCAAAAAATGGTTTTATGTCTTTGTCTACCCAACCACAACTACTTACAAGTTTTTCTGAGTGTCTAGATTCAATTTTATTCTACTTATCAAACCTTTTGTATTAGTCTTTCAACTTTGTAATAAATATCATCTGTCTTTGTTATTAATTTTGTATAATTTATTCAACAGAAAGTCGACAAAATATACCTTTTGCCGTTTTACTCGATGGGTAGATGTTGGCGTGAATAAGTATTTGAAAGCTAGTTCAACACGTAGTAAGTCATATGTAGTTGTAGGTATTCAAAATGGATAGACTCTCGATAAATAATAAATATAACTGAAAATTAATGTGGGGACTAGAACATTTGAAATTGGGGACTTAAAAAGAATGGGTATGGAAGATTATGTACAAAAATATACTTTAAACCTATTGCAAGAAATATTGTCATCTGTTATGAGACAACTACTTTTAGAAGACATTTTATAGACATTGTTTTCAATCAAATAGTTATTCTAAAAGTAATGAAAACATCTCTCAGAAAAACTCCCATATTTTTATTCTTATTCAGTTCTTTCACAAATTTCTTGCAGGTTGGCTGATCTGAAGGATTTCAAGAAAGTTAACGAGATATATGGTAAATGTAAGTTTTGCTAAACTGAACCTCTAATCTCTCTGTTATCAAATGCTGAGCTTGTACCTTAGATACGTCTGTATGATCTCTCCGTCTCCATTACGGTTCAACTTTAGTTTCTAGAGTATAGTTAAAATGAGTGAACTTGGAAATTAAAATTTCAACGAATGAGATTCTACTTGGAGATAAATTGAACTTTCCTTTGCAACAATTTACCTGGCGTACTTGCTGGTTACTTTGATACGTTGATGTATAGTTTTCTTTTGGGTCAATTATTGTGGTCGGATTCCAATAGGTAGATATAAATGTATTTGTTGTTCATGGGTTGACCTAGTGATAAAGAGAGGGCATGACCTCGTTAAAGGACTATCTATGGTAGTCAACTACCTAGGATTTAATATTGTTTGAGTTTTCTTGACATTTAAATGTTGTAACGTCAAACTGGTTATCTTCTAAGATCAGTCAAAATGTGTGTAAATTTGCATGAATGCACACGTGCTACTGCTCAAGTTGAGATGATTTTGTTTTCTTGGCTACTTTTTTATTGTAGATTTTCCGTCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTCGAAATTGAATGCATCGCTACACTTTGAAGGCCTCTGACCTAATTTCAGGTACCCCAGTTTTCAAGACAGAGTAAATTAATAAAATGGAGATATCAATCACAGCACAG

mRNA sequence

TGGAAGGTATCAAGGAAGCTGTTCAGACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCTGAGACAGGGAAATTTGTCTCAGATAACGTTGAAGACCAAACGGAGCAGGTCCTGAAAAATATGGGCGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTTAAGACGACTATTATAAAGTCGACAAAATATACCTTTTGCCGTTTTACTCGATGGGTAGATGTTGGCGTGAATAAGTTGGCTGATCTGAAGGATTTCAAGAAAGTTAACGAGATATATGATTTTCCGTCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTCGAAATTGAATGCATCGCTACACTTTGAAGGCCTCTGACCTAATTTCAGGTACCCCAGTTTTCAAGACAGAGTAAATTAATAAAATGGAGATATCAATCACAGCACAG

Coding sequence (CDS)

GAAGGTATCAAGGAAGCTGTTCAGACTGACAAGGCTCCAGCGGCATTAGGGCCATATTCTCAGGCTATCAAAGCCAACAACCTTCTCTTTGTGTCTGGTGTCCTAGGTCTAAATCCTGAGACAGGGAAATTTGTCTCAGATAACGTTGAAGACCAAACGGAGCAGGTCCTGAAAAATATGGGCGAAATATTGAAAGCTGGAGGTGCCAGCTATTCTTCTGTGGTTAAGACGACTATTATAAAGTCGACAAAATATACCTTTTGCCGTTTTACTCGATGGGTAGATGTTGGCGTGAATAAGTTGGCTGATCTGAAGGATTTCAAGAAAGTTAACGAGATATATGATTTTCCGTCCCCTGCTCCAGCTCGGTCGACATATCAGGTTGCAGCATTGCCTTTGGATGCTAAGGTCGAAATTGAATGCATCGCTACACTTTGA

Protein sequence

EGIKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYDFPSPAPARSTYQVAALPLDAKVEIECIATL

Homology

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BLAST of MELO3C031909 vs. NCBI nr
Match: KAA0033984.1 (reactive Intermediate Deaminase A [Cucumis melo var. makuwa] >TYK02561.1 reactive Intermediate Deaminase A [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-53
Identity = 121/145 (83.45%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE
Sbjct: 24  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 83

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGASYSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 84  ILKAGGASYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPA 143

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 144 PARSTYQVAALPLDAKVEIECIATL 148

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BLAST of MELO3C031909 vs. NCBI nr
Match: XP_008463412.1 (PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 2.4e-53
Identity = 121/145 (83.45%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE
Sbjct: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGASYSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 123 ILKAGGASYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPA 182

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 183 PARSTYQVAALPLDAKVEIECIATL 187

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BLAST of MELO3C031909 vs. NCBI nr
Match: KAG7031418.1 (Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.8 bits (556), Expect = 3.1e-53
Identity = 117/143 (81.82%), Postives = 121/143 (84.62%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGE
Sbjct: 63  IKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYDFPSPAPA 122
           ILKAGGA YSSVVKTTI+                    LADLKDFKKVNEIYDFPSPAPA
Sbjct: 123 ILKAGGAGYSSVVKTTIM--------------------LADLKDFKKVNEIYDFPSPAPA 182

Query: 123 RSTYQVAALPLDAKVEIECIATL 146
           RSTYQVAALPLDAKVEIECIATL
Sbjct: 183 RSTYQVAALPLDAKVEIECIATL 185

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BLAST of MELO3C031909 vs. NCBI nr
Match: XP_038903207.1 (reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 214.2 bits (544), Expect = 7.7e-52
Identity = 118/145 (81.38%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAVQTDKAPAALGPYSQAIKANNLLFVSG LGLNPETGKFVSD+VEDQTEQVLKNMGE
Sbjct: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGCLGLNPETGKFVSDDVEDQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGASYSSVVKTTI+                    LADLKDFKKVNEIY   FPSP+
Sbjct: 123 ILKAGGASYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPS 182

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 183 PARSTYQVAALPLDAKVEIECIATL 187

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BLAST of MELO3C031909 vs. NCBI nr
Match: XP_022976324.1 (reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-51
Identity = 117/145 (80.69%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGE
Sbjct: 63  IKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGASYSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 123 ILKAGGASYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPA 182

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 183 PARSTYQVAALPLDAKVEIECIATL 187

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BLAST of MELO3C031909 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-47
Identity = 104/144 (72.22%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 4   KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEI 63
           KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS++VEDQTEQVLKNMGEI
Sbjct: 64  KEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEI 123

Query: 64  LKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPAP 123
           LKA GA YSSVVKTTI+                    LADL DFK VNEIY   FP+P+P
Sbjct: 124 LKASGADYSSVVKTTIM--------------------LADLADFKTVNEIYAKYFPAPSP 183

Query: 124 ARSTYQVAALPLDAKVEIECIATL 146
           ARSTYQVAALPL+AK+EIECIATL
Sbjct: 184 ARSTYQVAALPLNAKIEIECIATL 187

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BLAST of MELO3C031909 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-27
Identity = 63/143 (44.06%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           I+  + T KAP A+GPYSQA+  +  +++SG +G++P +G+ VS  V ++ +Q LKNMGE
Sbjct: 5   IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGE 64

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKA G  +++VVKTT++                    LAD+ DF  VNEIY   F S  
Sbjct: 65  ILKAAGCDFTNVVKTTVL--------------------LADINDFNTVNEIYKQYFKSNF 124

Query: 123 PARSTYQVAALPLDAKVEIECIA 144
           PAR+ YQVAALP  +++EIE +A
Sbjct: 125 PARAAYQVAALPKGSRIEIEAVA 127

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BLAST of MELO3C031909 vs. ExPASy Swiss-Prot
Match: P52760 (2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE=1 SV=3)

HSP 1 Score: 122.1 bits (305), Expect = 5.2e-27
Identity = 64/143 (44.76%), Postives = 91/143 (63.64%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           I++ + T KAPAA+GPYSQA++ +  +++SG +GL+P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGE 64

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKA G  +++VVKTT++                    LAD+ DF  VNEIY   F    
Sbjct: 65  ILKAAGCDFNNVVKTTVL--------------------LADMNDFGTVNEIYKTYFQGSL 124

Query: 123 PARSTYQVAALPLDAKVEIECIA 144
           PAR+ YQVAALP  ++VEIE IA
Sbjct: 125 PARAAYQVAALPRGSRVEIEAIA 127

[Close]

BLAST of MELO3C031909 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-26
Identity = 64/142 (45.07%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 4   KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEI 63
           ++ + +  AP A+GPYSQA++A N +++SG LGL+P+TG  + + V +QT Q LKN+GE+
Sbjct: 41  RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGD-LKEGVVEQTHQSLKNLGEV 100

Query: 64  LKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPAP 123
           LKA GA Y +VVKTT++                    L ++ DF  VNE+Y   F SP P
Sbjct: 101 LKAAGADYGNVVKTTVL--------------------LQNIADFAAVNEVYGQYFKSPYP 160

Query: 124 ARSTYQVAALPLDAKVEIECIA 144
           AR+ YQVAALP    VEIE +A
Sbjct: 161 ARAAYQVAALPKGGLVEIEAVA 161

[Close]

BLAST of MELO3C031909 vs. ExPASy Swiss-Prot
Match: P52759 (2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Rida PE=1 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 9.8e-26
Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           I++ + T KAPAA+G YSQA+  +  ++VSG +G++P +G+ V   V ++ +Q LKN+GE
Sbjct: 5   IRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGE 64

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKA G  +++VVKTT++                    LAD+ DF  VNEIY   F    
Sbjct: 65  ILKAAGCDFTNVVKTTVL--------------------LADINDFGTVNEIYKTYFQGNL 124

Query: 123 PARSTYQVAALPLDAKVEIECIA 144
           PAR+ YQVAALP  +++EIE IA
Sbjct: 125 PARAAYQVAALPKGSRIEIEAIA 127

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BLAST of MELO3C031909 vs. ExPASy TrEMBL
Match: A0A5D3BS36 (Reactive Intermediate Deaminase A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00130 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 121/145 (83.45%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE
Sbjct: 24  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 83

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGASYSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 84  ILKAGGASYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPA 143

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 144 PARSTYQVAALPLDAKVEIECIATL 148

[Close]

BLAST of MELO3C031909 vs. ExPASy TrEMBL
Match: A0A1S3CJ54 (reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103501583 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 121/145 (83.45%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE
Sbjct: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGASYSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 123 ILKAGGASYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPA 182

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 183 PARSTYQVAALPLDAKVEIECIATL 187

[Close]

BLAST of MELO3C031909 vs. ExPASy TrEMBL
Match: A0A6J1IN69 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476753 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 117/145 (80.69%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGE
Sbjct: 63  IKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGASYSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 123 ILKAGGASYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPA 182

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 183 PARSTYQVAALPLDAKVEIECIATL 187

[Close]

BLAST of MELO3C031909 vs. ExPASy TrEMBL
Match: A0A0A0L2Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 117/145 (80.69%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD+VEDQTEQVLKNMGE
Sbjct: 63  IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDVEDQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGG+SYSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 123 ILKAGGSSYSSVVKTTIM--------------------LADLKDFKKVNEIYAKYFPSPA 182

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTY+VA LPLDAKVEIECIATL
Sbjct: 183 PARSTYEVARLPLDAKVEIECIATL 187

[Close]

BLAST of MELO3C031909 vs. ExPASy TrEMBL
Match: A0A6J1FUT7 (reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447476 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.1e-51
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 3   IKEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGE 62
           IKEAV+TDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSD++E QTEQVLKNMGE
Sbjct: 63  IKEAVKTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDDIEGQTEQVLKNMGE 122

Query: 63  ILKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPA 122
           ILKAGGA YSSVVKTTI+                    LADLKDFKKVNEIY   FPSPA
Sbjct: 123 ILKAGGAGYSSVVKTTIM--------------------LADLKDFKKVNEIYGKYFPSPA 182

Query: 123 PARSTYQVAALPLDAKVEIECIATL 146
           PARSTYQVAALPLDAKVEIECIATL
Sbjct: 183 PARSTYQVAALPLDAKVEIECIATL 187

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BLAST of MELO3C031909 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-48
Identity = 104/144 (72.22%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 4   KEAVQTDKAPAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEI 63
           KE V T+KAPAALGPYSQAIKANNL+F+SGVLGL PETGKFVS++VEDQTEQVLKNMGEI
Sbjct: 64  KEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPETGKFVSESVEDQTEQVLKNMGEI 123

Query: 64  LKAGGASYSSVVKTTIIKSTKYTFCRFTRWVDVGVNKLADLKDFKKVNEIYD--FPSPAP 123
           LKA GA YSSVVKTTI+                    LADL DFK VNEIY   FP+P+P
Sbjct: 124 LKASGADYSSVVKTTIM--------------------LADLADFKTVNEIYAKYFPAPSP 183

Query: 124 ARSTYQVAALPLDAKVEIECIATL 146
           ARSTYQVAALPL+AK+EIECIATL
Sbjct: 184 ARSTYQVAALPLNAKIEIECIATL 187

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BLAST of MELO3C031909 vs. TAIR 10
Match: AT3G04480.1 (endoribonucleases )

HSP 1 Score: 41.6 bits (96), Expect = 6.4e-04
Identity = 22/62 (35.48%), Postives = 34/62 (54.84%), Query Frame = 0


Query: 12  APAALGPYSQAIKANNLLFVSGVLGLNPETGKFVSDNVEDQTEQVLKNMGEILKAGGASY 71
           AP+ +GPYSQA    ++L ++G LGL+P T    ++    +  Q L N   I ++   S 
Sbjct: 424 APSCIGPYSQATLHQSVLHMAGQLGLDPPTMNLQTEGAIAELNQALTNSEAIAESFNCSI 483

Query: 72  SS 74
           SS
Sbjct: 484 SS 485

The following BLAST results are available for this feature:

BLAST of MELO3C031909 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033984.1	2.4e-53	83.45	reactive Intermediate Deaminase A [Cucumis melo var. makuwa] >TYK02561.1 reactiv...	[more]
XP_008463412.1	2.4e-53	83.45	PREDICTED: reactive Intermediate Deaminase A, chloroplastic-like [Cucumis melo]	[more]
KAG7031418.1	3.1e-53	81.82	Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_038903207.1	7.7e-52	81.38	reactive Intermediate Deaminase A, chloroplastic-like [Benincasa hispida]	[more]
XP_022976324.1	2.2e-51	80.69	reactive Intermediate Deaminase A, chloroplastic [Cucurbita maxima]	[more]

BLAST of MELO3C031909 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JQ4	2.7e-47	72.22	Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P52758	4.0e-27	44.06	2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=...	[more]
P52760	5.2e-27	44.76	2-iminobutanoate/2-iminopropanoate deaminase OS=Mus musculus OX=10090 GN=Rida PE...	[more]
Q10121	7.5e-26	45.07	RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ...	[more]
P52759	9.8e-26	43.36	2-iminobutanoate/2-iminopropanoate deaminase OS=Rattus norvegicus OX=10116 GN=Ri...	[more]

BLAST of MELO3C031909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BS36	1.2e-53	83.45	Reactive Intermediate Deaminase A OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CJ54	1.2e-53	83.45	reactive Intermediate Deaminase A, chloroplastic-like OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1IN69	1.1e-51	80.69	reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0L2Z6	1.1e-51	80.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077580 PE=3 SV=1	[more]
A0A6J1FUT7	3.1e-51	80.00	reactive Intermediate Deaminase A, chloroplastic OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of MELO3C031909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20390.1	1.9e-48	72.22	endoribonuclease L-PSP family protein	[more]
AT3G04480.1	6.4e-04	35.48	endoribonucleases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 1..144 e-value: 4.1E-41 score: 142.0
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 4..145
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 10..79 e-value: 3.3E-22 score: 78.8 coord: 101..144 e-value: 5.1E-10 score: 39.4
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 101..145
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 4..80
None	No IPR available	PANTHER	PTHR11803:SF51	BNAA05G36080D PROTEIN	coord: 101..145
None	No IPR available	PANTHER	PTHR11803:SF51	BNAA05G36080D PROTEIN	coord: 4..80
None	No IPR available	CDD	cd00448	YjgF_YER057c_UK114_family	coord: 19..143 e-value: 2.06163E-37 score: 121.511
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 121..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031909.1	MELO3C031909.1	mRNA