MELO3C031839.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C031839.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	chr06: 8391733 .. 8394157 (-)
RNA-Seq Expression	MELO3C031839.jh1
Synteny	MELO3C031839.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGATGGAGCAATTAAGTGTCAAAGATTAGAGGAGCATGACCCTAGTTATTTGCCAAAGGATGATATTCCTACTACTGAAGATTGGGATAATGCAAAAGTATTTCTAAAGTTCCTAAAGACATTTTCAGAGGTAACAATGAAGTTTTCTGCATCTATGTCTGTGACTTCAAACATATTTTTTCACGAACTTTGTTTGATCCAAAAAATAATTCGTGAATATTCATCATATGAGAATGCATTATTGAGTCAGATGACATTAAAGCATGCAAACAAAATTCAACAAGTATTAGGGTATAACTACAAGTGAGAAGACCGATTTATTATTGTATGTTTCTGTAGTTCTTGACCTAGGTACAAGTTGGCTTATGTGAATTGTTGCTTTAATGAATTTTTGGAGAAAGATTGTGCAAAAATGTGGACGAATAAGGTTGAAGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCACAAACACAATCATATACACTTATCGAAGGATTTGACTTTCAAAGCCAAAGTGAAATACCTCTTATCTCATCTAGTGGATCTTATAAGACACGTGTTGCTGTTCATGATAGATTTAAACAAAATAACAAAACATGTCTAGATGATGCTAAAACAGAGGTGGTTCGTTATCTGGATGAGGCTCGTATAGAAGATGAATATTTAGATTTGCTAAATTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAGTAGCCAGGGACATCTACAGTATTCCTATATCAACTGTGCCTTCAGAGTCCACCCTTAGCACTAGAGGACGGGTGTTAGATTTTTTTTCGAAGTTCTTTTAACTCCTCAAACTGCAGAGGCACTCATTTATGCTCAGAATTGGATTCAGTCTAAACTTTTGGATGACATGACTGAAGAAATTGACGAGGCTGAAGAAATTGATGAAGGTAATATTCTGTTTGAAGTACGCATTTAAAATTTTCAATTATCTCATATAAGCTAACAGTTTGTCATTTTGATCTAAAATTCATAAACATAGGAAAGAAGATGGAAGTCGCATTTGAGAATTTGAATAATGACTCTATGGTTTAAATCCCTACTCTCAAATCTTTATTTACATTTTTTTGTTTTAAATTGTTAACTTGTTAACTATTGAATCTTGTTCTTTTAGAATCTTGAAGCACAGTGATGGAAGCACTTTGAGTTATATGAACAAGGTGTAACGTAGACAATAGATTCAATTGTAGGTAAAAGAGAAATTGACATATTTGAATAACTTTAATTTTTTGTTTGGTCTCTTGTTCTTACATATTTGATGTCGTGATCGATGATTCTTTACTGTGAGTGCTTCATTTGGTCTCTTGTTCTTACATAGTTTCTATCATTTGACAACGTAACTACTGTTGACTGCATTTTAGAAGAGTAAAATTACTCTGTAAGGAGTGTGAACCAAAACAGAAAAAAAACTTGTTATCAGCAATGTTTTGAACAGTCACATTGCTTTCGTGAAGGATCTGGTTTTTATCTTCTTTTAAATGAAGAAGGATACGTTCTTATCTCTAAATTTTCAACATAGCAAATGGGCTTTATGTTTTTGGCTCAAATATTATCAATATCTGCGAGTGATACTTAAGTAATCAACTTTTGCATGATAGTGCTCTCCACTCGAATAACCTCAGAATTTGCTAGAAAATGGGTTCCCTTATGCAAAAAGTACAGCATTGAGCCACGAGCACCAAAGTGGTATTTTGCTCTGAAGATTGATTATTTAAAGGACAAGGTTCAACCATCATTTGTGAAGGAGCGGAGAACAATGAAGGTAGTAAACTCCCATTCCTTCCATATTATTTTCTTTTCCATATTGAGTTGGATTAGTTGCTGAAATTTGATGTGTTTTTGGCAAAGGTTTGAAGGAAGGAAAGGTAGTATGTTGTGGAAGTGGGCCATTCAGTGGGCCATTCAAAGAACTACATTAGTATGTGCTTTATCCTCTGTTAAAGATGCTCCCATTAAAACTTAGTTTAGCAGTTTAATTAGCTATTGAGAAATTGATTGTTTTTGTGTGTAATGTAAAAGGGTGGGTGAATTTGGTTTTTCAATTGTTTGTTTTTTCAGGTGGTTTTTGTAAATATAATGTAATGTTGTTGTTTTGACTTTTGAGATTGGATTTGATTGATTCTTGTTATGATAATGATGAAAATTATTTGATGATGCAATGGTTGAAAGTGATTGTTTAATTTCGTTCTTTACGCTTCTAGCATTGAAATATCTTTTGTTTATTGAGAAACTAGCCGGCTAGTTTTCTGTTTGTACAAAATCTAGGCATCTAGGAAGGCAGCAAGGAATGCTATAAATCTTCCCAGGCTAGATGAAGAAGTGAATAAAGTCGTAGTTGTTGTTCGAATCCACTAA

mRNA sequence

ATGTTGGATGGAGCAATTAAGTGTCAAAGATTAGAGGAGCATGACCCTAGTTATTTGCCAAAGGATGATATTCCTACTACTGAAGATTGGGATAATGCAAAAGTATTTCTAAAGTTCCTAAAGACATTTTCAGAGGTAACAATGAAGTTTTCTGCATCTATGTCTGTGACTTCAAACATATTTTTTCACGAACTTTGTTTGATCCAAAAAATAATTCGTGAATATTCATCATATGAGAATGCATTATTGAGTCAGATGACATTAAAGCATGCAAACAAAATTCAACAAGTATTAGGGTACAAGTTGGCTTATGTGAATTGTTGCTTTAATGAATTTTTGGAGAAAGATTGTGCAAAAATGTGGACGAATAAGGTTGAAGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCACAAACACAATCATATACACTTATCGAAGGATTTGACTTTCAAAGCCAAAGTGAAATACCTCTTATCTCATCTAGTGGATCTTATAAGACACGTGTTGCTGTTCATGATAGATTTAAACAAAATAACAAAACATGTCTAGATGATGCTAAAACAGAGGTGGTTCGTTATCTGGATGAGGCTCGTATAGAAGATGAATATTTAGATTTGCTAAATTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAGTAGCCAGGGACATCTACAGTATTCCTATATCAACTGTGCCTTCAGAGTCCACCCTTAGCACTAGAGGACGGTCTAAACTTTTGGATGACATGACTGAAGAAATTGACGAGGCTGAAGAAATTGATGAAGTGCTCTCCACTCGAATAACCTCAGAATTTGCTAGAAAATGGGTTCCCTTATGCAAAAAGTACAGCATTGAGCCACGAGCACCAAAGTGGTATTTTGCTCTGAAGATTGATTATTTAAAGGACAAGGTTCAACCATCATTTGTGAAGGAGCGGAGAACAATGAAGGCATCTAGGAAGGCAGCAAGGAATGCTATAAATCTTCCCAGGCTAGATGAAGAAGTGAATAAAGTCGTAGTTGTTGTTCGAATCCACTAA

Coding sequence (CDS)

ATGTTGGATGGAGCAATTAAGTGTCAAAGATTAGAGGAGCATGACCCTAGTTATTTGCCAAAGGATGATATTCCTACTACTGAAGATTGGGATAATGCAAAAGTATTTCTAAAGTTCCTAAAGACATTTTCAGAGGTAACAATGAAGTTTTCTGCATCTATGTCTGTGACTTCAAACATATTTTTTCACGAACTTTGTTTGATCCAAAAAATAATTCGTGAATATTCATCATATGAGAATGCATTATTGAGTCAGATGACATTAAAGCATGCAAACAAAATTCAACAAGTATTAGGGTACAAGTTGGCTTATGTGAATTGTTGCTTTAATGAATTTTTGGAGAAAGATTGTGCAAAAATGTGGACGAATAAGGTTGAAGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCACAAACACAATCATATACACTTATCGAAGGATTTGACTTTCAAAGCCAAAGTGAAATACCTCTTATCTCATCTAGTGGATCTTATAAGACACGTGTTGCTGTTCATGATAGATTTAAACAAAATAACAAAACATGTCTAGATGATGCTAAAACAGAGGTGGTTCGTTATCTGGATGAGGCTCGTATAGAAGATGAATATTTAGATTTGCTAAATTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAGTAGCCAGGGACATCTACAGTATTCCTATATCAACTGTGCCTTCAGAGTCCACCCTTAGCACTAGAGGACGGTCTAAACTTTTGGATGACATGACTGAAGAAATTGACGAGGCTGAAGAAATTGATGAAGTGCTCTCCACTCGAATAACCTCAGAATTTGCTAGAAAATGGGTTCCCTTATGCAAAAAGTACAGCATTGAGCCACGAGCACCAAAGTGGTATTTTGCTCTGAAGATTGATTATTTAAAGGACAAGGTTCAACCATCATTTGTGAAGGAGCGGAGAACAATGAAGGCATCTAGGAAGGCAGCAAGGAATGCTATAAATCTTCCCAGGCTAGATGAAGAAGTGAATAAAGTCGTAGTTGTTGTTCGAATCCACTAA

Protein sequence

MLDGAIKCQRLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSVTSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLGYKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEGFDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIEDEYLDLLNWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGRSKLLDDMTEEIDEAEEIDEVLSTRITSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAINLPRLDEEVNKVVVVVRIH

Homology

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BLAST of MELO3C031839.jh1 vs. NCBI nr
Match: ADN33674.1 (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 446 bits (1146), Expect = 1.34e-153
Identity = 243/326 (74.54%), Postives = 251/326 (76.99%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           MLDGAIKCQ    RLEEHDPSYLPKDDIPTTEDWDNAKVF+KFLKTFSEVTMKFSASMSV
Sbjct: 13  MLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFSEVTMKFSASMSV 72

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           TSNIFFHELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 73  TSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSEKTNLLLYVSVVL 132

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLE+DCAK+WTNKVEEAFRRLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 133 DPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEG 192

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIE---DEYL 240
           F FQSQSEIP ISSSGSYK R  VHDRFKQ+NKTCLDDAKTEV RYLDEARI+   DEYL
Sbjct: 193 FGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCMGDEYL 252

Query: 241 DLLNWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR------------------ 274
           DLL WWKVN+SRFKIISQVARDIYSIPISTVPSES  ST GR                  
Sbjct: 253 DLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALI 312

[Close]

BLAST of MELO3C031839.jh1 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 446 bits (1146), Expect = 7.28e-149
Identity = 243/326 (74.54%), Postives = 251/326 (76.99%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           MLDGAIKCQ    RLEEHDPSYLPKDDIPTTEDWDNAKVF+KFLKTFSEVTMKFSASMSV
Sbjct: 346 MLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFSEVTMKFSASMSV 405

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           TSNIFFHELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 406 TSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSEKTNLLLYVSVVL 465

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLE+DCAK+WTNKVEEAFRRLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 466 DPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEG 525

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIE---DEYL 240
           F FQSQSEIP ISSSGSYK R  VHDRFKQ+NKTCLDDAKTEV RYLDEARI+   DEYL
Sbjct: 526 FGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCMGDEYL 585

Query: 241 DLLNWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR------------------ 274
           DLL WWKVN+SRFKIISQVARDIYSIPISTVPSES  ST GR                  
Sbjct: 586 DLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALI 645

[Close]

BLAST of MELO3C031839.jh1 vs. NCBI nr
Match: XP_016899473.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 429 bits (1102), Expect = 1.06e-146
Identity = 231/323 (71.52%), Postives = 243/323 (75.23%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           +LDGAIKCQ    RL+EHDPSYLP DDIPT EDWD+AKVF+KFLKTFS VTMKFSASM V
Sbjct: 13  ILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFSGVTMKFSASMYV 72

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           T NIFF+ELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 73  TRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSEKTNLLLYVYVVL 132

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLEKDC K+WTNK+EEAF RLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 133 DRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEKYSQTQSCTPIEG 192

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIEDEYLDLL 240
           FDFQSQSEIP ISSSGSYK RV VHDRFKQ+NKTCLDDAKTEV RYLDEA I+DEYLDLL
Sbjct: 193 FDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLDEAHIKDEYLDLL 252

Query: 241 NWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR--------------------- 274
           NWWKVNSSRFKIISQV RD+YSIPIS VPSE   ST GR                     
Sbjct: 253 NWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQTAEPLICAQ 312

[Close]

BLAST of MELO3C031839.jh1 vs. NCBI nr
Match: XP_016899471.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo] >XP_016899472.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 429 bits (1102), Expect = 4.36e-146
Identity = 231/323 (71.52%), Postives = 243/323 (75.23%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           +LDGAIKCQ    RL+EHDPSYLP DDIPT EDWD+AKVF+KFLKTFS VTMKFSASM V
Sbjct: 13  ILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFSGVTMKFSASMYV 72

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           T NIFF+ELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 73  TRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSEKTNLLLYVYVVL 132

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLEKDC K+WTNK+EEAF RLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 133 DRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEKYSQTQSCTPIEG 192

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIEDEYLDLL 240
           FDFQSQSEIP ISSSGSYK RV VHDRFKQ+NKTCLDDAKTEV RYLDEA I+DEYLDLL
Sbjct: 193 FDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLDEAHIKDEYLDLL 252

Query: 241 NWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR--------------------- 274
           NWWKVNSSRFKIISQV RD+YSIPIS VPSE   ST GR                     
Sbjct: 253 NWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQTAEPLICAQ 312

[Close]

BLAST of MELO3C031839.jh1 vs. NCBI nr
Match: XP_016899474.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo])

HSP 1 Score: 349 bits (896), Expect = 8.84e-116
Identity = 191/272 (70.22%), Postives = 199/272 (73.16%), Query Frame = 0


Query: 48  MKFSASMSVTSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG-------- 107
           MKFSASM VT NIFF+ELCLIQ+IIREYSSYENALLSQMTL    K  +  G        
Sbjct: 1   MKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSEKTN 60

Query: 108 ------------YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQ 167
                       YKLAYVN CFNEFLEKDC K+WTNK+EEAF RLCDDYYMRMSKEKYSQ
Sbjct: 61  LLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEKYSQ 120

Query: 168 TQSYTLIEGFDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEAR 227
           TQS T IEGFDFQSQSEIP ISSSGSYK RV VHDRFKQ+NKTCLDDAKTEV RYLDEA 
Sbjct: 121 TQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLDEAH 180

Query: 228 IEDEYLDLLNWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR------------ 274
           I+DEYLDLLNWWKVNSSRFKIISQV RD+YSIPIS VPSE   ST GR            
Sbjct: 181 IKDEYLDLLNWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQ 240

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy Swiss-Prot
Match: Q941L0 (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana OX=3702 GN=CESA3 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-18
Identity = 45/60 (75.00%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           TSEFARKWVP CKKYSIEPRAP+WYFA KIDYLKDKVQ SFVK+RR MK   +  +  IN
Sbjct: 392 TSEFARKWVPFCKKYSIEPRAPEWYFAAKIDYLKDKVQTSFVKDRRAMKREYEEFKIRIN 451

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy Swiss-Prot
Match: A2XN66 (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica OX=39946 GN=CESA2 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-18
Identity = 44/60 (73.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           TSEFARKWVP CKKYSIEPRAP+WYFA KIDYLKDKVQ SFVK+RR MK   +  +  +N
Sbjct: 402 TSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVN 461

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy Swiss-Prot
Match: Q84M43 (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA2 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-18
Identity = 44/60 (73.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           TSEFARKWVP CKKYSIEPRAP+WYFA KIDYLKDKVQ SFVK+RR MK   +  +  +N
Sbjct: 402 TSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVN 461

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy Swiss-Prot
Match: Q8LPK5 (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana OX=3702 GN=CESA8 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 8.4e-18
Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMK 330
           T++FARKWVP CKKYSIEPRAP++YF+LKIDYL+DKVQPSFVKERR MK
Sbjct: 317 TADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMK 365

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy Swiss-Prot
Match: A2Y0X2 (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica OX=39946 GN=CESA1 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.2e-17
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           T+EFARKWVP CKK++IEPRAP++YFA KIDYLKDK+QPSFVKERR MK   +  +  IN
Sbjct: 405 TAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRIN 464

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy TrEMBL
Match: E5GB32 (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 446 bits (1146), Expect = 6.47e-154
Identity = 243/326 (74.54%), Postives = 251/326 (76.99%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           MLDGAIKCQ    RLEEHDPSYLPKDDIPTTEDWDNAKVF+KFLKTFSEVTMKFSASMSV
Sbjct: 13  MLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFSEVTMKFSASMSV 72

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           TSNIFFHELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 73  TSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSEKTNLLLYVSVVL 132

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLE+DCAK+WTNKVEEAFRRLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 133 DPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEG 192

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIE---DEYL 240
           F FQSQSEIP ISSSGSYK R  VHDRFKQ+NKTCLDDAKTEV RYLDEARI+   DEYL
Sbjct: 193 FGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCMGDEYL 252

Query: 241 DLLNWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR------------------ 274
           DLL WWKVN+SRFKIISQVARDIYSIPISTVPSES  ST GR                  
Sbjct: 253 DLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALI 312

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy TrEMBL
Match: D0UIX2 (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 446 bits (1146), Expect = 3.52e-149
Identity = 243/326 (74.54%), Postives = 251/326 (76.99%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           MLDGAIKCQ    RLEEHDPSYLPKDDIPTTEDWDNAKVF+KFLKTFSEVTMKFSASMSV
Sbjct: 346 MLDGAIKCQKTFERLEEHDPSYLPKDDIPTTEDWDNAKVFVKFLKTFSEVTMKFSASMSV 405

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           TSNIFFHELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 406 TSNIFFHELCLIQEIIREYSSYENALLSQMTLSMQTKFNKYWGITTSEKTNLLLYVSVVL 465

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLE+DCAK+WTNKVEEAFRRLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 466 DPRYKLAYVNYCFNEFLEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEG 525

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIE---DEYL 240
           F FQSQSEIP ISSSGSYK R  VHDRFKQ+NKTCLDDAKTEV RYLDEARI+   DEYL
Sbjct: 526 FGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKTEVTRYLDEARIDCMGDEYL 585

Query: 241 DLLNWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR------------------ 274
           DLL WWKVN+SRFKIISQVARDIYSIPISTVPSES  ST GR                  
Sbjct: 586 DLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGGRVLDSFRSSLTPQTAEALI 645

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DU44 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 429 bits (1102), Expect = 5.11e-147
Identity = 231/323 (71.52%), Postives = 243/323 (75.23%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           +LDGAIKCQ    RL+EHDPSYLP DDIPT EDWD+AKVF+KFLKTFS VTMKFSASM V
Sbjct: 13  ILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFSGVTMKFSASMYV 72

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           T NIFF+ELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 73  TRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSEKTNLLLYVYVVL 132

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLEKDC K+WTNK+EEAF RLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 133 DRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEKYSQTQSCTPIEG 192

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIEDEYLDLL 240
           FDFQSQSEIP ISSSGSYK RV VHDRFKQ+NKTCLDDAKTEV RYLDEA I+DEYLDLL
Sbjct: 193 FDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLDEAHIKDEYLDLL 252

Query: 241 NWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR--------------------- 274
           NWWKVNSSRFKIISQV RD+YSIPIS VPSE   ST GR                     
Sbjct: 253 NWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQTAEPLICAQ 312

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DU07 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 429 bits (1102), Expect = 2.11e-146
Identity = 231/323 (71.52%), Postives = 243/323 (75.23%), Query Frame = 0


Query: 1   MLDGAIKCQ----RLEEHDPSYLPKDDIPTTEDWDNAKVFLKFLKTFSEVTMKFSASMSV 60
           +LDGAIKCQ    RL+EHDPSYLP DDIPT EDWD+AKVF+KFLKTFS VTMKFSASM V
Sbjct: 13  ILDGAIKCQKTFERLKEHDPSYLPNDDIPTVEDWDSAKVFVKFLKTFSGVTMKFSASMYV 72

Query: 61  TSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG----------------- 120
           T NIFF+ELCLIQ+IIREYSSYENALLSQMTL    K  +  G                 
Sbjct: 73  TRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSEKTNLLLYVYVVL 132

Query: 121 ---YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSYTLIEG 180
              YKLAYVN CFNEFLEKDC K+WTNK+EEAF RLCDDYYMRMSKEKYSQTQS T IEG
Sbjct: 133 DRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEKYSQTQSCTPIEG 192

Query: 181 FDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEARIEDEYLDLL 240
           FDFQSQSEIP ISSSGSYK RV VHDRFKQ+NKTCLDDAKTEV RYLDEA I+DEYLDLL
Sbjct: 193 FDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLDEAHIKDEYLDLL 252

Query: 241 NWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR--------------------- 274
           NWWKVNSSRFKIISQV RD+YSIPIS VPSE   ST GR                     
Sbjct: 253 NWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQTAEPLICAQ 312

[Close]

BLAST of MELO3C031839.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DU09 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 349 bits (896), Expect = 4.28e-116
Identity = 191/272 (70.22%), Postives = 199/272 (73.16%), Query Frame = 0


Query: 48  MKFSASMSVTSNIFFHELCLIQKIIREYSSYENALLSQMTLKHANKIQQVLG-------- 107
           MKFSASM VT NIFF+ELCLIQ+IIREYSSYENALLSQMTL    K  +  G        
Sbjct: 1   MKFSASMYVTRNIFFYELCLIQEIIREYSSYENALLSQMTLNMQTKFNKYWGMTTSEKTN 60

Query: 108 ------------YKLAYVNCCFNEFLEKDCAKMWTNKVEEAFRRLCDDYYMRMSKEKYSQ 167
                       YKLAYVN CFNEFLEKDC K+WTNK+EEAF RLCDDYYMRMSKEKYSQ
Sbjct: 61  LLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKIEEAFGRLCDDYYMRMSKEKYSQ 120

Query: 168 TQSYTLIEGFDFQSQSEIPLISSSGSYKTRVAVHDRFKQNNKTCLDDAKTEVVRYLDEAR 227
           TQS T IEGFDFQSQSEIP ISSSGSYK RV VHDRFKQ+NKTCLDDAKTEV RYLDEA 
Sbjct: 121 TQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKTEVTRYLDEAH 180

Query: 228 IEDEYLDLLNWWKVNSSRFKIISQVARDIYSIPISTVPSESTLSTRGR------------ 274
           I+DEYLDLLNWWKVNSSRFKIISQV RD+YSIPIS VPSE   ST GR            
Sbjct: 181 IKDEYLDLLNWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVLTSFRSSLTPQ 240

[Close]

BLAST of MELO3C031839.jh1 vs. TAIR 10
Match: AT5G05170.1 (Cellulose synthase family protein )

HSP 1 Score: 95.5 bits (236), Expect = 9.2e-20
Identity = 45/60 (75.00%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           TSEFARKWVP CKKYSIEPRAP+WYFA KIDYLKDKVQ SFVK+RR MK   +  +  IN
Sbjct: 392 TSEFARKWVPFCKKYSIEPRAPEWYFAAKIDYLKDKVQTSFVKDRRAMKREYEEFKIRIN 451

[Close]

BLAST of MELO3C031839.jh1 vs. TAIR 10
Match: AT4G18780.1 (cellulose synthase family protein )

HSP 1 Score: 92.8 bits (229), Expect = 5.9e-19
Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMK 330
           T++FARKWVP CKKYSIEPRAP++YF+LKIDYL+DKVQPSFVKERR MK
Sbjct: 317 TADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMK 365

[Close]

BLAST of MELO3C031839.jh1 vs. TAIR 10
Match: AT4G32410.1 (cellulose synthase 1 )

HSP 1 Score: 90.1 bits (222), Expect = 3.8e-18
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           T+EFA+KWVP CKK++IEPRAP++YFA KIDYLKDK+QPSFVKERR MK   +  +  IN
Sbjct: 408 TAEFAKKWVPFCKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRIN 467

[Close]

BLAST of MELO3C031839.jh1 vs. TAIR 10
Match: AT2G25540.1 (cellulose synthase 10 )

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           T+EF++KWVP CKK++IEPRAP++YF+ KIDYLKDK+QPSFVKERR MK   +  +  IN
Sbjct: 395 TAEFSKKWVPFCKKFNIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKREYEEFKVRIN 454

Query: 341 L 342
           +
Sbjct: 455 I 455

[Close]

BLAST of MELO3C031839.jh1 vs. TAIR 10
Match: AT5G17420.1 (Cellulose synthase family protein )

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-17
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 281 TSEFARKWVPLCKKYSIEPRAPKWYFALKIDYLKDKVQPSFVKERRTMKASRKAARNAIN 340
           T+EFARKWVP CKK+SIEPRAP+ YF LK+DYL+DKV P+FVKERR MK   +  +  IN
Sbjct: 371 TAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYLQDKVHPTFVKERRAMKREYEEFKVRIN 430

The following BLAST results are available for this feature:

BLAST of MELO3C031839.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33674.1	1.34e-153	74.54	transposase [Cucumis melo subsp. melo]	[more]
ACX85638.1	7.28e-149	74.54	putative transposase [Cucumis melo]	[more]
XP_016899473.1	1.06e-146	71.52	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]
XP_016899471.1	4.36e-146	71.52	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]
XP_016899474.1	8.84e-116	70.22	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]

BLAST of MELO3C031839.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941L0	1.3e-18	75.00	Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana O...	[more]
A2XN66	2.2e-18	73.33	Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa ...	[more]
Q84M43	2.2e-18	73.33	Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa ...	[more]
Q8LPK5	8.4e-18	83.67	Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana O...	[more]
A2Y0X2	3.2e-17	70.00	Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa ...	[more]

BLAST of MELO3C031839.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GB32	6.47e-154	74.54	Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
D0UIX2	3.52e-149	74.54	Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
A0A1S4DU44	5.11e-147	71.52	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucum...	[more]
A0A1S4DU07	2.11e-146	71.52	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucum...	[more]
A0A1S4DU09	4.28e-116	70.22	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]

BLAST of MELO3C031839.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05170.1	9.2e-20	75.00	Cellulose synthase family protein	[more]
AT4G18780.1	5.9e-19	83.67	cellulose synthase family protein	[more]
AT4G32410.1	3.8e-18	68.33	cellulose synthase 1	[more]
AT2G25540.1	1.1e-17	63.93	cellulose synthase 10	[more]
AT5G17420.1	1.9e-17	66.67	Cellulose synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	PANTHER	PTHR13301	X-BOX TRANSCRIPTION FACTOR-RELATED	coord: 279..344
None	No IPR available	PANTHER	PTHR13301:SF198	CELLULOSE SYNTHASE	coord: 279..344
IPR005150	Cellulose synthase	PFAM	PF03552	Cellulose_synt	coord: 281..340 e-value: 1.6E-21 score: 76.5
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 200..262 e-value: 8.2E-16 score: 57.6
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 23..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031839.jh1.t1	MELO3C031839.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity
molecular_function	GO:0046983	protein dimerization activity