MELO3C031835.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C031835.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Location	chr06: 21133812 .. 21134006 (+)
RNA-Seq Expression	MELO3C031835.jh1
Synteny	MELO3C031835.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACTGGGTTCGTGAATTATGGTCAACAAATAGTACGAGCTGCAAGGTACATTGGTCAAGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATAGCATCGGAGCATTTCCGTGGTCAAATCCATTTTGAATTCGATAAATGCATTGCTTGTGAA

mRNA sequence

ATGGTAACTGGGTTCGTGAATTATGGTCAACAAATAGTACGAGCTGCAAGGTACATTGGTCAAGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATAGCATCGGAGCATTTCCGTGGTCAAATCCATTTTGAATTCGATAAATGCATTGCTTGTGAA

Coding sequence (CDS)

ATGGTAACTGGGTTCGTGAATTATGGTCAACAAATAGTACGAGCTGCAAGGTACATTGGTCAAGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATAGCATCGGAGCATTTCCGTGGTCAAATCCATTTTGAATTCGATAAATGCATTGCTTGTGAA

Protein sequence

MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDKCIACE

Homology

[Close]

BLAST of MELO3C031835.jh1 vs. NCBI nr
Match: KAG4154834.1 (hypothetical protein ERO13_D03G073128v2 [Gossypium hirsutum])

HSP 1 Score: 130 bits (328), Expect = 7.76e-38
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYG Q VRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SEHFRG+IHFEFDK
Sbjct: 4  MVTGFMNYGHQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSEHFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. NCBI nr
Match: QRI60973.1 (NADH dehydrogenase subunit I [Psophocarpus tetragonolobus])

HSP 1 Score: 132 bits (331), Expect = 2.07e-37
Identity = 60/65 (92.31%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEK+I+SE FRG+IHFEFDK
Sbjct: 4  MVTGFINYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKIISSERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. NCBI nr
Match: YP_009751791.1 (NADH dehydrogenase subunit I [Herpetospermum pedunculosum] >QIT04524.1 NADH dehydrogenase subunit I [Herpetospermum pedunculosum] >QJR53011.1 NADH-plastoquinone oxidoreductase subunit I [Herpetospermum pedunculosum])

HSP 1 Score: 132 bits (331), Expect = 2.26e-37
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASE FRG+IHFEFDK
Sbjct: 4  MVTGFINYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. NCBI nr
Match: YP_009525239.1 (NADH-plastoquinone oxidoreductase subunit I [Hodgsonia macrocarpa] >AXR94526.1 NADH-plastoquinone oxidoreductase subunit I [Hodgsonia macrocarpa] >AXR94612.1 NADH-plastoquinone oxidoreductase subunit I [Hodgsonia macrocarpa] >AXR94696.1 NADH-plastoquinone oxidoreductase subunit I [Hodgsonia macrocarpa] >AXR94781.1 NADH-plastoquinone oxidoreductase subunit I [Hodgsonia macrocarpa])

HSP 1 Score: 132 bits (331), Expect = 2.40e-37
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASE FRG+IHFEFDK
Sbjct: 4  MVTGFINYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. NCBI nr
Match: ADZ36376.1 (NADH dehydrogenase 18 kDa subunit [Lysimachia christinae])

HSP 1 Score: 129 bits (325), Expect = 3.81e-37
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy Swiss-Prot
Match: Q2QD37 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhI PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGF+ITLSHANRLPVTIQYPYEKLIASE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGQQTVRAARYIGQGFVITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDK 63

Query: 61 CIACE 66
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy Swiss-Prot
Match: Q49KU4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhI PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDK 63

Query: 61 CIACE 66
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy Swiss-Prot
Match: Q9MTH8 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=ndhI PE=3 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDK 63

Query: 61 CIACE 66
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy Swiss-Prot
Match: A0ZZ89 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium barbadense OX=3634 GN=ndhI PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.3e-29
Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYG Q VRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGHQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDK 63

Query: 61 CIACE 66
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy Swiss-Prot
Match: Q2L959 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhI PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.3e-29
Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYG Q VRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGHQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDK 63

Query: 61 CIACE 66
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy TrEMBL
Match: A0A6H0ES63 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Herpetospermum pedunculosum OX=386182 GN=ndhI PE=3 SV=1)

HSP 1 Score: 132 bits (331), Expect = 1.09e-37
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASE FRG+IHFEFDK
Sbjct: 4  MVTGFINYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy TrEMBL
Match: A0A346QNL1 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Hodgsonia macrocarpa OX=2184935 GN=ndhI PE=3 SV=1)

HSP 1 Score: 132 bits (331), Expect = 1.16e-37
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASE FRG+IHFEFDK
Sbjct: 4  MVTGFINYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy TrEMBL
Match: F2W5C4 (NADH dehydrogenase 18 kDa subunit OS=Lysimachia christinae OX=213255 GN=ndhI PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 1.85e-37
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLI SE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy TrEMBL
Match: A0A6H0ERZ5 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhI PE=3 SV=1)

HSP 1 Score: 131 bits (329), Expect = 2.20e-37
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. ExPASy TrEMBL
Match: A0A6M3RU14 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=ndhI PE=3 SV=1)

HSP 1 Score: 131 bits (329), Expect = 2.20e-37
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          MVTGF+NYGQQ VRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASE FRG+IHFEFDK
Sbjct: 4  MVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDK 63

Query: 61 CIACE 65
          CIACE
Sbjct: 64 CIACE 68

[Close]

BLAST of MELO3C031835.jh1 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases )

HSP 1 Score: 126.7 bits (317), Expect = 6.7e-30
Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 1  MVTGFVNYGQQIVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASEHFRGQIHFEFDK 60
          M+TGF+NYGQQ +RAARYIGQGFMITLSH NRLPVTIQYPYEKLI SE FRG+IHFEFDK
Sbjct: 4  MITGFMNYGQQTLRAARYIGQGFMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFEFDK 63

Query: 61 CIACE 66
          CIACE
Sbjct: 64 CIACE 68

The following BLAST results are available for this feature:

BLAST of MELO3C031835.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG4154834.1	7.76e-38	92.31	hypothetical protein ERO13_D03G073128v2 [Gossypium hirsutum]	[more]
QRI60973.1	2.07e-37	92.31	NADH dehydrogenase subunit I [Psophocarpus tetragonolobus]	[more]
YP_009751791.1	2.26e-37	93.85	NADH dehydrogenase subunit I [Herpetospermum pedunculosum] >QIT04524.1 NADH dehy...	[more]
YP_009525239.1	2.40e-37	93.85	NADH-plastoquinone oxidoreductase subunit I [Hodgsonia macrocarpa] >AXR94526.1 N...	[more]
ADZ36376.1	3.81e-37	92.31	NADH dehydrogenase 18 kDa subunit [Lysimachia christinae]	[more]

BLAST of MELO3C031835.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD37	1.1e-29	92.31	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q49KU4	1.1e-29	92.31	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Eucalyptus globulus s...	[more]
Q9MTH8	1.1e-29	92.31	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Oenothera elata subsp...	[more]
A0ZZ89	4.3e-29	90.77	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium barbadense ...	[more]
Q2L959	4.3e-29	90.77	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gossypium hirsutum OX...	[more]

BLAST of MELO3C031835.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6H0ES63	1.09e-37	93.85	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Herpetospermum pedunc...	[more]
A0A346QNL1	1.16e-37	93.85	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Hodgsonia macrocarpa ...	[more]
F2W5C4	1.85e-37	92.31	NADH dehydrogenase 18 kDa subunit OS=Lysimachia christinae OX=213255 GN=ndhI PE=...	[more]
A0A6H0ERZ5	2.20e-37	93.85	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A6M3RU14	2.20e-37	93.85	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Trichosanthes kirilow...	[more]

BLAST of MELO3C031835.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01090.1	6.7e-30	87.69	NADPH dehydrogenases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004497	NADH-plastoquinone oxidoreductase, subunit I	PANTHER	PTHR47275	FAMILY NOT NAMED	coord: 1..65
None	No IPR available	PANTHER	PTHR47275:SF3	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT I, CHLOROPLASTIC	coord: 1..65
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 19..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031835.jh1.t1	MELO3C031835.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity