MELO3C031825 (gene) Melon (DHL92) v4

Overview
NameMELO3C031825
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGirdin-like
Locationchr06: 21746135 .. 21748266 (+)
RNA-Seq ExpressionMELO3C031825
SyntenyMELO3C031825
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCTTAAGGGAGATAGTTCAAAAGGTATAAGAGATAAGCTTTGAACAACGAAATCAATGGATTGAGAAGAGCATAGAATTAGAAGAGAAAAATTTTCATGCACCGCCCCACACGAATCCTTAAACTTGTCGTGCGAAACAAAATGTGATTTAAAAACTTTGAACCATTACCCATTAACATACAAACTTAACAGTAACAACATTTTAAGTAATGTAACACATTTCTCATTTACTTAAACCCAAAAATTTCTACAACAGTACAAAACAATCTACAATTCTTAAAACCAGAGCTTAACAAAGAAATGCCAAATGCTTTCAAAAACTTTAGTTGTCAACGATCGTTTAGCTCTTCAACTTGATCATTAAGCTCCTTGATTGATCGCTTAGTCCTGATCGCTTATCCTTTTAAACATGATCGTTTAGCATCCTAAATGATCGCTTACCTCCGATCATTTACCTGTCTACCCGATTGCTTACCTATCTAAACGATCGCTTACCTCTTATAACCTAGATAGGGAAAACTTAAAACATAGTGAGTGATGCTTTTAAAACGTTTTGGGAATAAAATTCTTAGAATCACTTTTGTTTAAACACGAGCTTGATGCTTAAATTCAATAACACATTTCAAATCTTATAAATACACATTAGTTTCACTTATTTCTTTGACCAAGACAAAAACCATTCTCGGGCATGGACTATTGTGTTGACCTTTTCATCAACAACATCCTTGAGAATTTCTTGATTCATTCCTTGTTGCTCAGGCTTCTTAGTGCAATATAATCTTTTATGCATTGTCCCGCCTCATTCCACCATGCAGACCTTCTCTACATGGCTGCATTTACTCATTATGTACACATAATAGCTAGCTTATTGATAGAAATAAAACTAATGGTTTACTCTCAAACAAAGCTTACAATCAATCAATAAAACATCAATCTTTAACTTTAAAAGATAAAATTAAAGATTTTCTTTCAAATCATGTTTTTCTGTAAGTGTAAACCTTCATTACATGACACATGAAACATGAGACTTAGAAAGCAAAGCTTTCGAAAACTATAATTATTTAGAAAAATCACTCACAGTACTAAGTTCCCCTCTTTGTTTGGAACTCTTCTTCGTCCTTCTTCTTACTTAAAGACCTTTAGCTTTTCTCTTTGTAAAAATCTCATAATAATAATCCTTTCCTTATGTTCTCTTCTCTTATTTACACTAATCTTCAGTTGGATTAGTCATTCCTTAAACTCCTATAGTCTTGCCAACTTCTGCTTAACTAAATTCTAAATCTTCGCATGTTATGACACCTGGAATCCACTCTACTGATCTGATAATTATAACCCTGAAAACCTCTTAAAACCTCTTAAAACCTCTTAAAACCTCCTACATAATCGTTTAGATTTCTGCAGATTGTCCAACCTTCTACACAATTGTTTAACCTCTTATACGATCATTCAATCCTCTTACACAATCGTTTATCCCTTTACATGATCATCTTTCTTTCTTACACAATCGTTTAGCTTCCTACATGCTCGTTTACTTTATTATACGATTGTTTAACAAAAATATATACACTTTTCAAAACCTTCTATTTAGGCACAGGTATTATAAAAATCGATTGTTAGAGTAAGAGAACAAGAGACTTCGTAAGGAGACAAGTCAATGGATGGATCATTCAACTTATTTGTAGAAAGAACTTAAAAAACAAGGTTTTCTTTAAGAAATCAAGATAAGTTAGAAAGAGTTTTGAGGTAGTAGATAAAGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAATGCAACATTATAGGTAATAATTGAGTCGCAAGATGAATATATTAAAGGTTTAGAAAGGGGGAAGGAATATTTCCTCGAGCTTGTCAATGATTTGAATACATCAATTGGAAAATAGTTAACACATATAATAGATTTGGAAGCACATGGTCATTCTCCACGTCAAACTGTTGATAACCTACATGTGAAGATGATTGAGCACTTTGAAGAATATGAGATATTGAATAATTATGTTGATTCCTTACACTATCAACTTTTTAAATTTCAAAATTCAAGTGAGAAGATAGTGTAAGAATATAAGTTACTGAAGACAGATTAAATGCAAATGAAG

mRNA sequence

TACCTTAAGGGAGATAGTTCAAAAGGTATAAGAGATAAGCTTTGAACAACGAAATCAATGGATTGAGAAGAGCATAGAATTAGAAGTATTATAAAAATCGATTGTTAGAGTAAGAGAACAAGAGACTTCGTAAGGAGACAAGTCAATGGATGGATCATTCAACTTATTTGTAGAAAGAACTTAAAAAACAAGGTTTTCTTTAAGAAATCAAGATAAGTTAGAAAGAGTTTTGAGGTAGTAGATAAAGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAATGCAACATTATAGGTAATAATTGAGTCGCAAGATGAATATATTAAAGGTTTAGAAAGGGGGAAGGAATATTTCCTCGAGCTTGTCAATGATTTGAATACATCAATTGGAAAATAGTTAACACATATAATAGATTTGGAAGCACATGGTCATTCTCCACGTCAAACTGTTGATAACCTACATGTGAAGATGATTGAGCACTTTGAAGAATATGAGATATTGAATAATTATGTTGATTCCTTACACTATCAACTTTTTAAATTTCAAAATTCAAGTGAGAAGATAGTGTAAGAATATAAGTTACTGAAGACAGATTAAATGCAAATGAAG

Coding sequence (CDS)

ATGATTGAGCACTTTGAAGAATATGAGATATTGAATAATTATGTTGATTCCTTACACTATCAACTTTTTAAATTTCAAAATTCAAGTGAGAAGATAGTGTAA

Protein sequence

MIEHFEEYEILNNYVDSLHYQLFKFQNSSEKIV
Homology
[Close]
BLAST of MELO3C031825 vs. NCBI nr
Match: KAA0034022.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-04
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0 

Query: 1  MIEHFEEYEILNNYVDSLHYQLFKFQNSSEKIV 34
          M E FEEYEIL NYVDSLHYQL  FQNSSE+I+
Sbjct: 21 MAERFEEYEILKNYVDSLHYQLTTFQNSSERIM 53

[Close]
BLAST of MELO3C031825 vs. ExPASy TrEMBL
Match: A0A5A7SS95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00050 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-04
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0 

Query: 1  MIEHFEEYEILNNYVDSLHYQLFKFQNSSEKIV 34
          M E FEEYEIL NYVDSLHYQL  FQNSSE+I+
Sbjct: 21 MAERFEEYEILKNYVDSLHYQLTTFQNSSERIM 53

The following BLAST results are available for this feature:
BLAST of MELO3C031825 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0034022.12.3e-0478.79girdin-like [Cucumis melo var. makuwa][more]
BLAST of MELO3C031825 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031825 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SS951.1e-0478.79Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00050 PE=... [more]
BLAST of MELO3C031825 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031825.1MELO3C031825.1mRNA