MELO3C031813.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C031813.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like
Location	chr06: 7700471 .. 7702002 (+)
RNA-Seq Expression	MELO3C031813.jh1
Synteny	MELO3C031813.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGTGAATTCTATCCCGCCGCCGTCCAAATTAGATCTTTGTTTAAAGAGTGAATTGGATTAGCCATCCCAAAACCATCATCTTTGTTTCTTCTCTTCATCCTTAATAATCCCATGGCGATCCTAGCTCTTCTCACGCTCTCTCCCTAAAACCCTAATTTTGGGTTCTACATTCTCACGTTCCTTCCTTACTGCCACCGGAACCGCCGTATCAGCCTCTTCTCGCTCATCTTTCTCCCTTCTGCGCCGCCTCCTTCCCCTCGCTGCTATAGTCGCCGCTGATTTCGGGTTTCTCTCTTCTGCCATGAGCGTGATGGACTTTTCTACGTCTGACGCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTCGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGGTGAAATCTCTCTCAATTTTTAAAATTTTTTTTTATTATTAACATCTATATCAAAACCCTTGCCATTGTCGGAGTGGCAATGAATTGGTTCATTTCTAGTGGTTGCTGAAGAAAAATGTGCAGAAAGGAAACAAAGAGTTTAGTGATTTTTCAAGTTTTAGTTTTTTCCAATGTTTGAAATATTTTTAACTATATTACTTATTTCAGAACCCTTAACTTTTTGTCTTAAAACGAATTCTGTTTATCTATACACATATCTATGCTCTGAATTTGAGAATTATGAATGGAATTTTGGGTCACGATTGGTAATAACTTAGTTCTTTTGTGATAAATGGTATCGGTAGTCATTTGTGCCTTTTCTTCTTCATACAGTGAGGAAGAAGCTAGGATGAAGATGTACTCTTGTTTCAACTAAATTCACCATTTTATTTGGGTGCCTTGTTTCTCAAGAAGTTTCTCACAAAATCAAAGATATATATAAATATACCATGGTTGTGTCCATTTTTTTGTCTCTTGTATTGTTGATTCTCTGAAGTCGTAACTATTCCTTCTTTTTTTAGAGCTGCCTAAGGTCCAAGTGGTCTTTTCTGATAGATACATTGATATTGAAAACAAAAACTATAGAGGTAATTGATTCTTAGTTATATTTATTTCTCACATCTTCAACCAATTAGTTGTACGTTTGTCTTAATGTGTATTCATGGTTTATTTGGTGTTTGATAGGGGAGCCCTTTATAAACGGACAAGCCGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAAAGAGATGTTAGACTTTAAATATTGCATATTCTTATTCCGAGTAGTTTCTTCTAATTTTATTTTATTTTATTTTTAATTTTACTATAGCTCTTTTAATTATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTGA

mRNA sequence

TTCGTGAATTCTATCCCGCCGCCGTCCAAATTAGATCTTTGTTTAAAGAGTGAATTGGATTAGCCATCCCAAAACCATCATCTTTGTTTCTTCTCTTCATCCTTAATAATCCCATGGCGATCCTAGCTCTTCTCACGCTCTCTCCCTAAAACCCTAATTTTGGGTTCTACATTCTCACGTTCCTTCCTTACTGCCACCGGAACCGCCGTATCAGCCTCTTCTCGCTCATCTTTCTCCCTTCTGCGCCGCCTCCTTCCCCTCGCTGCTATAGTCGCCGCTGATTTCGGGTTTCTCTCTTCTGCCATGAGCGTGATGGACTTTTCTACGTCTGACGCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTCGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGGAGCCCTTTATAAACGGACAAGCCGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAAAGAGATGTTAGACTTTAAATATTGCATATTCTTATTCCGAGTAGTTTCTTCTAATTTTATTTTATTTTATTTTTAATTTTACTATAGCTCTTTTAATTATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTGA

Coding sequence (CDS)

ATGAGCGTGATGGACTTTTCTACGTCTGACGCGAAACCTAAGTACTCTAACGACCCACCCACATTTTCGGATTATGGCTGTGATTTCGAACACTGGCTCGTTGTCATGGATTCGCCAAGGGCTAAACTCACGAGGGATGAGATGATCAACATCTATATCAAAACCCTTGCCATGGTTGTTGGAAGATACATTGATATTGAAAACAAAAACTATAGAGGGGAGCCCTTTATAAACGGACAAGCCGTTCCATATGACCTCAAGTACCATCAGCAGTACTATAAACGAATTAATAGACTCGATCGGCCATGCGAAGCATGTAAGCTCCTATTTGGAGGAATTGAACTTTCACATATTAGACTTTGGAGCGATTCGGAGGAGTTAGACTAA

Protein sequence

MSVMDFSTSDAKPKYSNDPPTFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVGRYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINRLDRPCEACKLLFGGIELSHIRLWSDSEELD

Homology

[Close]

BLAST of MELO3C031813.jh1 vs. NCBI nr
Match: XP_008456056.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucumis melo] >KAA0038987.1 multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa] >TYK11172.1 multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa])

HSP 1 Score: 136 bits (343), Expect = 1.76e-37
Identity = 82/154 (53.25%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 2   SVMDFSTSDAKPKYSNDPPTFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG 61
           SV  FSTSD  PK  N PPTFSD GCDF+HWLVVMD   A+LTRDEMINIYIKTLAMVVG
Sbjct: 64  SVRYFSTSD-DPK-PNGPPTFSDDGCDFKHWLVVMDLRGAELTRDEMINIYIKTLAMVVG 123

Query: 62  R--------------------------------------------YIDIENKNYRGEPFI 111
                                                        Y DIENKNY GEPFI
Sbjct: 124 SEEEARMKMYSVSTKFFFSFGCLVSEELSHKIKELPKVLWVIPDSYTDIENKNYGGEPFI 183

[Close]

BLAST of MELO3C031813.jh1 vs. NCBI nr
Match: XP_008451724.1 (PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis melo] >TYK16244.1 multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (265), Expect = 3.32e-24
Identity = 68/164 (41.46%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 2   SVMDFST-------SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIY 61
           SV DFST       +D  P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SVRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVGR--------------------------------------------YIDIEN 105
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.jh1 vs. NCBI nr
Match: KAA0059032.1 (multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (265), Expect = 3.32e-24
Identity = 68/164 (41.46%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 2   SVMDFST-------SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIY 61
           SV DFST       +D  P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SVRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVGR--------------------------------------------YIDIEN 105
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.jh1 vs. NCBI nr
Match: XP_030498737.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cannabis sativa] >KAF4366135.1 hypothetical protein F8388_014853 [Cannabis sativa] >KAF4395537.1 hypothetical protein G4B88_011001 [Cannabis sativa])

HSP 1 Score: 103 bits (257), Expect = 1.96e-23
Identity = 62/154 (40.26%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 2   SVMDFSTSDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMV 61
           +V   S +D  P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ YIKTLAMV
Sbjct: 71  NVTSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEPPEGELTRDEIIDSYIKTLAMV 130

Query: 62  VGR--------------------------------------------YIDIENKNYRGEP 102
           VG                                             Y+D++NK+Y GEP
Sbjct: 131 VGSEQEARMKIYSVSTRCYFAFGALVSEELSYKIKELPKVRWVLPDSYLDVKNKDYGGEP 190

[Close]

BLAST of MELO3C031813.jh1 vs. NCBI nr
Match: KJB61600.1 (hypothetical protein B456_009G369000 [Gossypium raimondii])

HSP 1 Score: 103 bits (258), Expect = 2.53e-23
Identity = 60/139 (43.17%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 7   STSDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVGR-- 66
           S +D  P YSN PP  T    GCDFEHWLVV++ P+   TRDE+I+ YIKTLA VVG   
Sbjct: 87  SLNDPSPNYSNRPPKETILLDGCDFEHWLVVVEPPKEDATRDEIIDSYIKTLAQVVGSED 146

Query: 67  --------------------------------YIDIENKNYRGEPFINGQAVPYDLKYHQ 102
                                           Y+D++NK+Y GEPFINGQAVPYD KYH+
Sbjct: 147 EARMKIYSVSTRHYYAFGALVSEELSYKIKDSYLDVKNKDYGGEPFINGQAVPYDPKYHE 206

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.0e-19
Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 0


Query: 7   STSDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG--- 66
           S +D  P +SN PP  T    GCDFEHWLVV++ P+ + TRDE+I+ YIKTLA +VG   
Sbjct: 73  SLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSED 132

Query: 67  -----------------------------------------RYIDIENKNYRGEPFINGQ 103
                                                     Y+D+ NK+Y GEPFI+G+
Sbjct: 133 EARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGK 192

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-09
Identity = 36/121 (29.75%), Postives = 52/121 (42.98%), Query Frame = 0


Query: 9   SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG----- 68
           +D  P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G     
Sbjct: 72  NDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTLTSVLGCEEEA 131

Query: 69  ---------------------------------------RYIDIENKNYRGEPFINGQAV 84
                                                   Y+D+ NK+Y G+ ++ G+ +
Sbjct: 132 KKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVI 191

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy Swiss-Prot
Match: Q9CAH0 (Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF7 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 31/114 (27.19%), Postives = 49/114 (42.98%), Query Frame = 0


Query: 26  GCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVGR----------------------- 85
           GCD++HWLV+M  P    TR+ ++  +++TLAM +G                        
Sbjct: 51  GCDYKHWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRI 110

Query: 86  ----------------------YIDIENKNYRGEPFINGQAVPYDLKYHQQYYK 95
                                  +D +N+ Y GEPF++G+ VPYD KYH  + +
Sbjct: 111 HEPLTYKIRSLPDVKWVLPDSFIVDGDNR-YGGEPFVDGEVVPYDEKYHADWLR 163

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-07
Identity = 38/125 (30.40%), Postives = 54/125 (43.20%), Query Frame = 0


Query: 6   FSTSDAKPKYSNDPPTFSD---YGCDFEHWLVVMDSPRAK-LTRDEMINIYIKTLAMVVG 65
           +S  ++   +S+ PPT       GCD+EHWL+VMD P  +  T+ +MI+ YI+TLA VVG
Sbjct: 58  YSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVG 117

Query: 66  --------------------------------------------RYIDIENKNYRGEPFI 83
                                                        Y+D ENK+Y  E F+
Sbjct: 118 SEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFV 177

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.3e-07
Identity = 31/118 (26.27%), Postives = 51/118 (43.22%), Query Frame = 0


Query: 26  GCDFEHWLVVMDSPRAKL-TRDEMINIYIKTLAMVVG----------------------- 85
           GCD+ HWL+VM+ P+    TR++MI+ Y+ TLA V+G                       
Sbjct: 83  GCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCT 142

Query: 86  ---------------------RYIDIENKNYRGEPFINGQAVPYDLKYHQQYYKRINR 99
                                 YID++NK+Y G+ ++NG+ +P     +Q    R ++
Sbjct: 143 VTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSRSSK 200

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TBM4 (Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00050 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 8.51e-38
Identity = 82/154 (53.25%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 2   SVMDFSTSDAKPKYSNDPPTFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG 61
           SV  FSTSD  PK  N PPTFSD GCDF+HWLVVMD   A+LTRDEMINIYIKTLAMVVG
Sbjct: 64  SVRYFSTSD-DPK-PNGPPTFSDDGCDFKHWLVVMDLRGAELTRDEMINIYIKTLAMVVG 123

Query: 62  R--------------------------------------------YIDIENKNYRGEPFI 111
                                                        Y DIENKNY GEPFI
Sbjct: 124 SEEEARMKMYSVSTKFFFSFGCLVSEELSHKIKELPKVLWVIPDSYTDIENKNYGGEPFI 183

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy TrEMBL
Match: A0A1S3C315 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103496103 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 8.51e-38
Identity = 82/154 (53.25%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 2   SVMDFSTSDAKPKYSNDPPTFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG 61
           SV  FSTSD  PK  N PPTFSD GCDF+HWLVVMD   A+LTRDEMINIYIKTLAMVVG
Sbjct: 64  SVRYFSTSD-DPK-PNGPPTFSDDGCDFKHWLVVMDLRGAELTRDEMINIYIKTLAMVVG 123

Query: 62  R--------------------------------------------YIDIENKNYRGEPFI 111
                                                        Y DIENKNY GEPFI
Sbjct: 124 SEEEARMKMYSVSTKFFFSFGCLVSEELSHKIKELPKVLWVIPDSYTDIENKNYGGEPFI 183

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UT11 (Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00540 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.61e-24
Identity = 68/164 (41.46%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 2   SVMDFST-------SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIY 61
           SV DFST       +D  P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SVRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVGR--------------------------------------------YIDIEN 105
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CZ72 (Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00090 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.61e-24
Identity = 68/164 (41.46%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 2   SVMDFST-------SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIY 61
           SV DFST       +D  P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SVRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVGR--------------------------------------------YIDIEN 105
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BTA4 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492931 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.61e-24
Identity = 68/164 (41.46%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 2   SVMDFST-------SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIY 61
           SV DFST       +D  P +SN PP  T    GCDFEHWLVVM+ P  +LTRDE+I+ Y
Sbjct: 65  SVRDFSTRATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPDEQLTRDEIIDSY 124

Query: 62  IKTLAMVVGR--------------------------------------------YIDIEN 105
           IKTLAMVVG                                             Y+D++N
Sbjct: 125 IKTLAMVVGSEEEARMKIYSVSTRCYFAFGCLVSEELSYKIKELPKVRWVLPDSYLDVKN 184

[Close]

BLAST of MELO3C031813.jh1 vs. TAIR 10
Match: AT3G15000.1 (cobalt ion binding )

HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20
Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 0


Query: 7   STSDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG--- 66
           S +D  P +SN PP  T    GCDFEHWLVV++ P+ + TRDE+I+ YIKTLA +VG   
Sbjct: 73  SLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSED 132

Query: 67  -----------------------------------------RYIDIENKNYRGEPFINGQ 103
                                                     Y+D+ NK+Y GEPFI+G+
Sbjct: 133 EARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGK 192

[Close]

BLAST of MELO3C031813.jh1 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10
Identity = 36/121 (29.75%), Postives = 52/121 (42.98%), Query Frame = 0


Query: 9   SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG----- 68
           +D  P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G     
Sbjct: 72  NDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTLTSVLGWQEEA 131

Query: 69  ---------------------------------------RYIDIENKNYRGEPFINGQAV 84
                                                   Y+D+ NK+Y G+ ++ G+ +
Sbjct: 132 KKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVI 191

[Close]

BLAST of MELO3C031813.jh1 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10
Identity = 36/121 (29.75%), Postives = 52/121 (42.98%), Query Frame = 0


Query: 9   SDAKPKYSNDPP--TFSDYGCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVG----- 68
           +D  P +SN PP  T    GCD+EHWL+VM+    K T +EMIN Y+KTL  V+G     
Sbjct: 72  NDPSPNWSNRPPKETILLDGCDYEHWLIVMEFTDPKPTEEEMINSYVKTLTSVLGCEEEA 131

Query: 69  ---------------------------------------RYIDIENKNYRGEPFINGQAV 84
                                                   Y+D+ NK+Y G+ ++ G+ +
Sbjct: 132 KKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVPNKDYGGDLYVEGKVI 191

[Close]

BLAST of MELO3C031813.jh1 vs. TAIR 10
Match: AT1G72530.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 31/114 (27.19%), Postives = 49/114 (42.98%), Query Frame = 0


Query: 26  GCDFEHWLVVMDSPRAKLTRDEMINIYIKTLAMVVGR----------------------- 85
           GCD++HWLV+M  P    TR+ ++  +++TLAM +G                        
Sbjct: 51  GCDYKHWLVLMKPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRI 110

Query: 86  ----------------------YIDIENKNYRGEPFINGQAVPYDLKYHQQYYK 95
                                  +D +N+ Y GEPF++G+ VPYD KYH  + +
Sbjct: 111 HEPLTYKIRSLPDVKWVLPDSFIVDGDNR-YGGEPFVDGEVVPYDEKYHADWLR 163

[Close]

BLAST of MELO3C031813.jh1 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-08
Identity = 38/125 (30.40%), Postives = 54/125 (43.20%), Query Frame = 0


Query: 6   FSTSDAKPKYSNDPPTFSD---YGCDFEHWLVVMDSPRAK-LTRDEMINIYIKTLAMVVG 65
           +S  ++   +S+ PPT       GCD+EHWL+VMD P  +  T+ +MI+ YI+TLA VVG
Sbjct: 58  YSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVG 117

Query: 66  --------------------------------------------RYIDIENKNYRGEPFI 83
                                                        Y+D ENK+Y  E F+
Sbjct: 118 SEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFV 177

The following BLAST results are available for this feature:

BLAST of MELO3C031813.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456056.1	1.76e-37	53.25	PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial...	[more]
XP_008451724.1	3.32e-24	41.46	PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial...	[more]
KAA0059032.1	3.32e-24	41.46	multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa]	[more]
XP_030498737.1	1.96e-23	40.26	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cannabis ...	[more]
KJB61600.1	2.53e-23	43.17	hypothetical protein B456_009G369000 [Gossypium raimondii]	[more]

BLAST of MELO3C031813.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA5	6.0e-19	37.58	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
Q84JZ6	3.3e-09	29.75	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9CAH0	1.8e-07	27.19	Multiple organellar RNA editing factor 7, mitochondrial OS=Arabidopsis thaliana ...	[more]
O22793	3.1e-07	30.40	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q38732	5.3e-07	26.27	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]

BLAST of MELO3C031813.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBM4	8.51e-38	53.25	Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C315	8.51e-38	53.25	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Cu...	[more]
A0A5A7UT11	1.61e-24	41.46	Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CZ72	1.61e-24	41.46	Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BTA4	1.61e-24	41.46	multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Cucumis...	[more]

BLAST of MELO3C031813.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15000.1	4.3e-20	37.58	cobalt ion binding	[more]
AT3G06790.1	2.4e-10	29.75	plastid developmental protein DAG, putative	[more]
AT3G06790.2	2.4e-10	29.75	plastid developmental protein DAG, putative	[more]
AT1G72530.1	1.3e-08	27.19	plastid developmental protein DAG, putative	[more]
AT2G33430.1	2.2e-08	30.40	differentiation and greening-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31346:SF23	OS09G0509000 PROTEIN	coord: 63..92
None	No IPR available	PANTHER	PTHR31346:SF23	OS09G0509000 PROTEIN	coord: 8..61
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 63..92 coord: 8..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031813.jh1.t1	MELO3C031813.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016554	cytidine to uridine editing