MELO3C031795 (gene) Melon (DHL92) v4

Overview
NameMELO3C031795
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr02: 18739669 .. 18740359 (-)
RNA-Seq ExpressionMELO3C031795
SyntenyMELO3C031795
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATAGGAGTTTCGATTCAGCAATTTGATATGGATGTGACTCAAGAATATATCCATTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGAGCAGCCGTGGGTCATCTGTACATATTTAAATATTGTATAATTATTTAAATTATTTATTCAATTAAATATTTCTAATTTTTTTTACAATTTACAGAGATCGAACAACGCAAGACTTTGTGATGTAGTAGATGATCCACATCAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGCGGAAGAAAGTGCCTCCTATGACACAAACACAGAGCCAAACTGGTTATGGTAGTTCGATGACGATGATGCCAACATTTGTAGCAGGATATTGTGATTCTGAGATCGATACAGGATATTATGATGCAGGGGTGGGTCCATAGTCTTCATACATGGATGTTGGTCCATCAACTTCTTACATGCATGGACACGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGTACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACTAGAGAACCAAGAGGACCAAGAACAACATAGAGTT

mRNA sequence

ATGGAAATAGGAGTTTCGATTCAGCAATTTGATATGGATGTGACTCAAGAATATATCCATTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGAGCAGCCGTGGGTCATCTGAGATCGAACAACGCAAGACTTTGTGATGTAGTAGATGATCCACATCAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGCGGAAGAAAGTGCCTCCTATGACACAAACACAGAGCCAAACTGGTTATGGTAGTTCGATGACGATGATGCCAACATTTGTAGCAGGATATTGTGATTCTGAGATCGATACAGGATATTATGATGCAGGGGTGGGTCCATAGTCTTCATACATGGATGTTGGTCCATCAACTTCTTACATGCATGGACACGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGTACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACTAGAGAACCAAGAGGACCAAGAACAACATAGAGTT

Coding sequence (CDS)

ATGATCCACATCAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGCGGAAGAAAGTGCCTCCTATGACACAAACACAGAGCCAAACTGGTTATGGTAGTTCGATGACGATGATGCCAACATTTGTAGCAGGATATTGTGATTCTGAGATCGATACAGGATATTATGATGCAGGGGTGGGTCCATAG

Protein sequence

MIHIKSLIYVIIMRGTWRRYIICTIYLLYLHQFIGDVFEWKKLNSMKFTIMRKKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVGP
Homology
[Close]
BLAST of MELO3C031795 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 8.0e-13
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVGP 98
          ++VPP TQTQSQTGYGS MTMMPTF AGYCDS+I TGYYDAGVGP
Sbjct: 37 EEVPPTTQTQSQTGYGSPMTMMPTFGAGYCDSKIGTGYYDAGVGP 81

[Close]
BLAST of MELO3C031795 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-12
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVGP 98
          ++VPP TQTQSQTGYGS M MMPTF AGYCDSE+ TGYYDAG+GP
Sbjct: 31 EEVPPTTQTQSQTGYGSPMMMMPTFGAGYCDSEVSTGYYDAGIGP 75

[Close]
BLAST of MELO3C031795 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-12
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 53  KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVGP 98
           ++VPP TQTQSQTGYGS MTMMPTF AGYCDSE+ TGYYDAG+ P
Sbjct: 288 EEVPPTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGTGYYDAGISP 332

[Close]
BLAST of MELO3C031795 vs. NCBI nr
Match: TYK16354.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 5.2e-12
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVG 97
          ++VPP TQTQSQTGYG  MTMMPTF AGYCDSE+DTGYYD GVG
Sbjct: 31 EEVPPTTQTQSQTGYGRPMTMMPTFGAGYCDSEVDTGYYDVGVG 74

[Close]
BLAST of MELO3C031795 vs. NCBI nr
Match: KAA0061327.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVG 97
          ++V P TQTQSQTGYGS MTMMPTF AGYCDSE+DTGYYD GVG
Sbjct: 31 EEVSPTTQTQSQTGYGSPMTMMPTFGAGYCDSEVDTGYYDVGVG 74

[Close]
BLAST of MELO3C031795 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.9e-13
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVGP 98
          ++VPP TQTQSQTGYGS MTMMPTF AGYCDS+I TGYYDAGVGP
Sbjct: 37 EEVPPTTQTQSQTGYGSPMTMMPTFGAGYCDSKIGTGYYDAGVGP 81

[Close]
BLAST of MELO3C031795 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.6e-13
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVGP 98
          ++VPP TQTQSQTGYGS M MMPTF AGYCDSE+ TGYYDAG+GP
Sbjct: 31 EEVPPTTQTQSQTGYGSPMMMMPTFGAGYCDSEVSTGYYDAGIGP 75

[Close]
BLAST of MELO3C031795 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 53  KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVGP 98
           ++VPP TQTQSQTGYGS MTMMPTF AGYCDSE+ TGYYDAG+ P
Sbjct: 288 EEVPPTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGTGYYDAGISP 332

[Close]
BLAST of MELO3C031795 vs. ExPASy TrEMBL
Match: A0A5D3CZG9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001380 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVG 97
          ++VPP TQTQSQTGYG  MTMMPTF AGYCDSE+DTGYYD GVG
Sbjct: 31 EEVPPTTQTQSQTGYGRPMTMMPTFGAGYCDSEVDTGYYDVGVG 74

[Close]
BLAST of MELO3C031795 vs. ExPASy TrEMBL
Match: A0A5A7V379 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29891G00010 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.6e-12
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 53 KKVPPMTQTQSQTGYGSSMTMMPTFVAGYCDSEIDTGYYDAGVG 97
          ++V P TQTQSQTGYGS MTMMPTF AGYCDSE+DTGYYD GVG
Sbjct: 31 EEVSPTTQTQSQTGYGSPMTMMPTFGAGYCDSEVDTGYYDVGVG 74

The following BLAST results are available for this feature:
BLAST of MELO3C031795 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01111.18.0e-1384.44GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0049532.11.8e-1280.00GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0041168.12.3e-1280.00serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK16354.15.2e-1281.82GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
KAA0061327.11.2e-1181.82GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... [more]
BLAST of MELO3C031795 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031795 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BMS33.9e-1384.44GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5D3CXX38.6e-1380.00GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7TDY51.1e-1280.00Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3CZG92.5e-1281.82GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
A0A5A7V3795.6e-1281.82GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... [more]
BLAST of MELO3C031795 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031795.1MELO3C031795.1mRNA