MELO3C031787 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031787
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Girdin-like
Location	chr05: 24026438 .. 24026821 (-)
RNA-Seq Expression	MELO3C031787
Synteny	MELO3C031787

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAGGAAGGAAGCTTGGTTGTTTTTCTTTGCAAAACCAACTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAAGGCGGTGATATATAGATGCAGAGATTTTCATGGTGTGTCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGCTTTTTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATATGCAAGAGTCTGACTTTTCATACCATCCTGAAGATTGCCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTGTAAGGAAGATAAAGACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAATAGATATCT

mRNA sequence

CCAAGGAAGGAAGCTTGGTTGTTTTTCTTTGCAAAACCAACTTCTGAAAATGTCATATGGAAGGCTCAATGGATGCCTTTGAAGGCGGTGATATATAGATGCAGAGATTTTCATGGTGTGTCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGCTTTTTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATATGCAAGAGTCTGACTTTTCATACCATCCTGAAGATTGCCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTGTAAGGAAGATAAAGACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAATAGATATCT

Coding sequence (CDS)

ATGCCTTTGAAGGCGGTGATATATAGATGCAGAGATTTTCATGGTGTGTCTTTGTTGGGACCATGGGGAGGTGTTAACTATACACCATTGTTAGCTTTTTGTCAGGTGTGGCTCAAACAGTTTATACCACCAACTCATAATATGCAAGAGTCTGACTTTTCATACCATCCTGAAGATTGCCAAGGAAAAAAACGTCAAGCAGTATGCGCATGGAAATCTGTAAGGAAGATAAAGACAAAGGACATTACGAAGGAGTTACTAGTGGGTACGAGGCATGGCAGACAAACAAAAAGAAGAATATAA

Protein sequence

MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDCQGKKRQAVCAWKSVRKIKTKDITKELLVGTRHGRQTKRRI

Homology

[Close]

BLAST of MELO3C031787 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 3.4e-35
Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 298 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 357

Query: 61  QGKKRQAVCAWKSVRKIKTK 81
           QGKKRQAVCAWKS+RKIK K
Sbjct: 358 QGKKRQAVCAWKSIRKIKDK 377

[Close]

BLAST of MELO3C031787 vs. NCBI nr
Match: TYK16558.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 3.4e-35
Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 33  MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCAWKSVRKIKTK 81
           QGKKRQAVCAWKS+RKIK K
Sbjct: 93  QGKKRQAVCAWKSIRKIKDK 112

[Close]

BLAST of MELO3C031787 vs. NCBI nr
Match: KAA0044912.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 3.4e-35
Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 142 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 201

Query: 61  QGKKRQAVCAWKSVRKIKTK 81
           QGKKRQAVCAWKS+RKIK K
Sbjct: 202 QGKKRQAVCAWKSIRKIKDK 221

[Close]

BLAST of MELO3C031787 vs. NCBI nr
Match: KAA0056623.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34
Identity = 71/99 (71.72%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKA IYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPT N+QESDFSY+PEDC
Sbjct: 319 MPLKAAIYRCEDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTQNLQESDFSYNPEDC 378

Query: 61  QGKKRQAVCAWKSVRKIKTKDITKELLVGTRHGRQTKRR 100
           QGKKRQAVCAWKS+RKIK K   + +  G    +  KR+
Sbjct: 379 QGKKRQAVCAWKSIRKIKDKGHCEGVTSGYEAWKANKRK 417

[Close]

BLAST of MELO3C031787 vs. NCBI nr
Match: TYK07606.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 5.0e-34
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRCRDFH + LLGP GGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 33  MPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCAWKSVRKIKTKDITKELLVGTRHGRQTKRR 100
           QGKKRQAVCAWKS+RKIK K   + ++ G    +  +R+
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRRK 131

[Close]

BLAST of MELO3C031787 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35
Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 298 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 357

Query: 61  QGKKRQAVCAWKSVRKIKTK 81
           QGKKRQAVCAWKS+RKIK K
Sbjct: 358 QGKKRQAVCAWKSIRKIKDK 377

[Close]

BLAST of MELO3C031787 vs. ExPASy TrEMBL
Match: A0A5D3CZ50 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35
Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 33  MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCAWKSVRKIKTK 81
           QGKKRQAVCAWKS+RKIK K
Sbjct: 93  QGKKRQAVCAWKSIRKIKDK 112

[Close]

BLAST of MELO3C031787 vs. ExPASy TrEMBL
Match: A0A5A7TNJ1 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35
Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 142 MPLKAVIYRCGDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 201

Query: 61  QGKKRQAVCAWKSVRKIKTK 81
           QGKKRQAVCAWKS+RKIK K
Sbjct: 202 QGKKRQAVCAWKSIRKIKDK 221

[Close]

BLAST of MELO3C031787 vs. ExPASy TrEMBL
Match: A0A5A7UL51 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.3e-35
Identity = 71/99 (71.72%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKA IYRC DFH V LLGPWGGVNYTPLL   QVWLKQFIPPT N+QESDFSY+PEDC
Sbjct: 319 MPLKAAIYRCEDFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTQNLQESDFSYNPEDC 378

Query: 61  QGKKRQAVCAWKSVRKIKTKDITKELLVGTRHGRQTKRR 100
           QGKKRQAVCAWKS+RKIK K   + +  G    +  KR+
Sbjct: 379 QGKKRQAVCAWKSIRKIKDKGHCEGVTSGYEAWKANKRK 417

[Close]

BLAST of MELO3C031787 vs. ExPASy TrEMBL
Match: A0A5D3CB80 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9127G00010 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 1   MPLKAVIYRCRDFHGVSLLGPWGGVNYTPLLAFCQVWLKQFIPPTHNMQESDFSYHPEDC 60
           MPLKAVIYRCRDFH + LLGP GGVNYTPLL   QVWLKQFIPPTHN+QESDFSY PEDC
Sbjct: 33  MPLKAVIYRCRDFHSMPLLGPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDC 92

Query: 61  QGKKRQAVCAWKSVRKIKTKDITKELLVGTRHGRQTKRR 100
           QGKKRQAVCAWKS+RKIK K   + ++ G    +  +R+
Sbjct: 93  QGKKRQAVCAWKSIRKIKDKGHYEGVISGYEAWQANRRK 131

The following BLAST results are available for this feature:

BLAST of MELO3C031787 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036941.1	3.4e-35	87.50	girdin-like [Cucumis melo var. makuwa]	[more]
TYK16558.1	3.4e-35	87.50	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0044912.1	3.4e-35	87.50	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0056623.1	1.7e-34	71.72	girdin-like [Cucumis melo var. makuwa]	[more]
TYK07606.1	5.0e-34	71.72	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C031787 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031787 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5S7	1.7e-35	87.50	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]
A0A5D3CZ50	1.7e-35	87.50	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003770 PE...	[more]
A0A5A7TNJ1	1.7e-35	87.50	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002070 PE...	[more]
A0A5A7UL51	8.3e-35	71.72	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 P...	[more]
A0A5D3CB80	2.4e-34	71.72	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9127G00010 P...	[more]

BLAST of MELO3C031787 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 2..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031787.1	MELO3C031787.1	mRNA