MELO3C031781 (gene) Melon (DHL92) v4

Overview
NameMELO3C031781
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionSmall ribosomal subunit protein S13
Locationchr11: 5929923 .. 5930228 (-)
RNA-Seq ExpressionMELO3C031781
SyntenyMELO3C031781
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGTTTGTGGCGTTCCAATAGGAAGAGAGACGTTGGTCAATAGAGAGGAAGACGTTAGAGGTTTAGTCGTGGGTTTCGAGGTAGAATGAAGATGGCAGCTTTGTGCTATTTACGGCAGCTCCGACGTTCGTTTCAATAACTTTGCAACGTGTTTGACGACTGGTTTAACCATGGTTTTGGAGTTGTCAGAGGTTGATTTAGCCATCAGAGGAAGACGTTGGAGTTTTAACATCAGCGACAATGGGATTTTTTTAGCAGCGTTTAACAGCGTCTAACGTTGGTTGTGGGTTTGCGACGGGTTATAA

mRNA sequence

ACGGTTTGTGGCGTTCCAATAGGAAGAGAGACGTTGGTCAATAGAGAGGAAGACGTTAGAGGTTTAGTCGTGGGTTTCGAGGTAGAATGAAGATGGCAGCTTTGTGCTATTTACGGCAGCTCCGACGTTCGTTTCAATAACTTTGCAACGTGTTTGACGACTGGTTTAACCATGGTTTTGGAGTTGTCAGAGGTTGATTTAGCCATCAGAGGAAGACGTTGGAGTTTTAACATCAGCGACAATGGGATTTTTTTAGCAGCGTTTAACAGCGTCTAACGTTGGTTGTGGGTTTGCGACGGGTTATAA

Coding sequence (CDS)

ATGGTTTTGGAGTTGTCAGAGGTTGATTTAGCCATCAGAGGAAGACGTTGGAGTTTTAACATCAGCGACAATGGGATTTTTTTAGCAGCGTTTAACAGCGTCTAA

Protein sequence

MVLELSEVDLAIRGRRWSFNISDNGIFLAAFNSV
Homology
[Close]
BLAST of MELO3C031781 vs. ExPASy TrEMBL
Match: A0A5D3DT03 (Small ribosomal subunit protein S13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00670 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.7e-04
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 1  MVLELSEVDLAIRGRRWSFNISDNGIFLAAFNSV 35
          +VLE  EV LAIRGRRWSF++S+N +FLAAFN V
Sbjct: 6  IVLEPLEVGLAIRGRRWSFDVSNNKLFLAAFNDV 39

The following BLAST results are available for this feature:
BLAST of MELO3C031781 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C031781 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C031781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DT035.7e-0470.59Small ribosomal subunit protein S13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of MELO3C031781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031781.1MELO3C031781.1mRNA