MELO3C031779.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031779.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr06: 6585132 .. 6587270 (-)
RNA-Seq ExpressionMELO3C031779.jh1
SyntenyMELO3C031779.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCTTTTTTTTTTGAAGTAGGCTATATATATATAATGAGGTCTCTTCTCCATATATATTTGACAAAGAAATAATAGCAAACAAATTGAAGATCTCTAGGGTAGCATCCCCATGGTTTTTAAAAATTAACAAAATCAAATAATACTAAGTCAACTTGGATTAAATATATATATGTACATGTGAGTGTGTAGTTGGAACCACTTGATGCTCTAAAATGTTAGTATTGAATGTTATAATTTTATGAAAATATTGATAAAGTGTTGATGTATCAAAATTTTATATTATATCAATGGTAGATATTGATTAATGAGTCAGTGGCATTTGGTGGACATCGATCATTATTCTGTGTGATAGAATATAAAATTTTGCTTAAAAGTTTTTCCATTTACATCGATTTTCATAAATAAACACATTTCAAACTCTTATTAAATAAGGTTAAATCGTAATTTCCAAGATTCTATGGATGTATTTCATCGTTTTTTTAGTAGAAGACAAACTAGAAGATCTCTTGGGTAGCATCACTATGGATTTCAAAAAATTAATAAAAATAACATCCTCAAGAATCCTTTAAATCAACTTGGATAGACGTAAATATATTCATGTGAGAGTGTAGTGGACACCAAGATTTAAAAAAAAAAATAAAATTAAAGCCTCAATTAAAAAAATACTATCATAGAAATATCAATAAAATGGCATTATTTCAAGTGACATTATCTAACTTATTATTAGTCAAAACACGTTTAACTACGAAGTTTGAATGGAAAATCTAATGTGTTAGGTTGGCATGATCACTCCAAAACCAAATTTTCTTTTGGTAGGTTCAACATTATTTTTCTATTTTCCCCATTTTTTTTGTAGCAATTCCAAAATCAAATTTGAAAGAGTTCAATATACAATACCTCCGCTTCCCTTCTCCAATATTACAACAACCACCCATTTCATCAAACCTTTATTAGCATTGATGTTAGCATTTATCGATCAAAGACTACTAAAGTTGAATTGATAGCAAGCCCATTTATAAGGAGACTCGGTCTTTGTAATTAAAATAGAAATGCCAATTTTTCTTTTCTTTCTTTTGGTTCAGAAAGAAATACAAAAATTTATAGGATCATTAATAAGCAAACTGTTATGTAGAAGTTAAACACTCAGACATAATAAGGTCTTAGCTTCTCAGGAATATCCATGTCAGTTTTCTCCTTATAGGGTCGACTATGCATAATAAAGTCTACGAAGTATTAAAGTCTGCATCTCTATCGATCTATAACTTTCTTAACTTCTGTTGACCGATGTTGGGGAATTTGCCTATGAATTGAACATCAATATTCTAAACGTTGCTTGAACTTAATTGATATTTAATGTCTTGTTAGTGTGTTGTCATACTAAGTAAAATATCTGTTGTCAGGATATGACACGTTAGCTATTGGAAAAATAACCCTAAACACTTCAAGCTCCATCCGCCTAATTGAAGTTGTAACAAAGTTTGGTTTGGGTTGTTTATTTATAAACGCCACCAACACTATCTATATATTCAAAATATTATTTCAGCTTTAAATCTACAACCACAAATGGTTTTTTCCATAACAGCTTTCATTGCTAAGGTTGTTGTCATCTTTGCTTTGCTGCTTCATGTGTCGTTCAATGTTTCTGCGATGAACGTCGTCGAAACCAATAGAGCTGCTCGGATAGCTAGTAAGTTTTCAGCTTTCAATTATCACTCAACTCGTAAGCTTGTTAATAAGCATATAGTTTACATAATAAGAATGATCTATAATCTTTTATTCGTCGTATTTTAATATTACCCTGAGTTTGGAATTCGAATACAGAACTTTGTGTTCATTCAATAACCTCTGAAACATAAACTTTAAGTAGAAGCTAGGGTTGTTCATCGGTCCATCGAGGTTGGTTTTTGGCTAAAACTGATACACCGACCCCACTGATTTGTTGGTTTAGAGATTCGTTGGGTGGTAGTCAAAATTTGTGAGGGCCAATGGAGTGTCCAACCGAATACACAAATGATCTTTTGGGAAGGATCTCTTTATTGGAGCCACACTAAGATGAAAAGATCCAATATAGTTCGTAGTGGCGTTGGTCGGTTGGTGACCGGAAAGAAAACTCCAAGAAGAGAGAAGAGAATCTAG

mRNA sequence

TTTTCTTTTTTTTTTGAAGTAGGCTATATATATATAATGAGGTCTCTTCTCCATATATATTTGACAAAGAAATAATAGCAAACAAATTGAAGATCTCTAGGGTAGCATCCCCATGGTTTTTAAAAATTAACAAAATCAAATAATACTAAGTCAACTTGGATTAAATATATATATGTACATGTGAGTGTGTAGTTGGAACCACTTGATGCTCTAAAATGTTAGTATTGAATGTTATAATTTTATGAAAATATTGATAAAGTGTTGATGTATCAAAATTTTATATTATATCAATGGTAGATATTGATTAATGAGTCAGTGGCATTTGGTGGACATCGATCATTATTCTGTGTGATAGAATATAAAATTTTGCTTAAAAGTTTTTCCATTTACATCGATTTTCATAAATAAACACATTTCAAACTCTTATTAAATAAGGTTAAATCGTAATTTCCAAGATTCTATGGATGTATTTCATCGTTTTTTTAGTAGAAGACAAACTAGAAGATCTCTTGGGTAGCATCACTATGGATTTCAAAAAATTAATAAAAATAACATCCTCAAGAATCCTTTAAATCAACTTGGATAGACGTAAATATATTCATGTGAGAGTGTAGTGGACACCAAGATTTAAAAAAAAAAATAAAATTAAAGCCTCAATTAAAAAAATACTATCATAGAAATATCAATAAAATGGCATTATTTCAAGTGACATTATCTAACTTATTATTAGTCAAAACACGTTTAACTACGAAGTTTGAATGGAAAATCTAATGTGTTAGGTTGGCATGATCACTCCAAAACCAAATTTTCTTTTGGTAGGTTCAACATTATTTTTCTATTTTCCCCATTTTTTTTGTAGCAATTCCAAAATCAAATTTGAAAGAGTTCAATATACAATACCTCCGCTTCCCTTCTCCAATATTACAACAACCACCCATTTCATCAAACCTTTATTAGCATTGATGTTAGCATTTATCGATCAAAGACTACTAAAGTTGAATTGATAGCAAGCCCATTTATAAGGAGACTCGGTCTTTGTAATTAAAATAGAAATGCCAATTTTTCTTTTCTTTCTTTTGGTTCAGAAAGAAATACAAAAATTTATAGGATCATTAATAAGCAAACTGTTATGTAGAAGTTAAACACTCAGACATAATAAGGTCTTAGCTTCTCAGGAATATCCATGTCAGTTTTCTCCTTATAGGGTCGACTATGCATAATAAAGTCTACGAAGTATTAAAGTCTGCATCTCTATCGATCTATAACTTTCTTAACTTCTGTTGACCGATGTTGGGGAATTTGCCTATGAATTGAACATCAATATTCTAAACGTTGCTTGAACTTAATTGATATTTAATGTCTTGTTAGTGTGTTGTCATACTAAGTAAAATATCTGTTGTCAGGATATGACACGTTAGCTATTGGAAAAATAACCCTAAACACTTCAAGCTCCATCCGCCTAATTGAAGTTGTAACAAAGTTTGGTTTGGGTTGTTTATTTATAAACGCCACCAACACTATCTATATATTCAAAATATTATTTCAGCTTTAAATCTACAACCACAAATGGTTTTTTCCATAACAGCTTTCATTGCTAAGGTTGTTGTCATCTTTGCTTTGCTGCTTCATGTGTCGTTCAATGTTTCTGCGATGAACGTCGTCGAAACCAATAGAGCTGCTCGGATAGCTATCAAAATTTGTGAGGGCCAATGGAGTGTCCAACCGAATACACAAATGATCTTTTGGGAAGGATCTCTTTATTGGAGCCACACTAAGATGAAAAGATCCAATATAGTTCGTAGTGGCGTTGGTCGGTTGGTGACCGGAAAGAAAACTCCAAGAAGAGAGAAGAGAATCTAG

Coding sequence (CDS)

ATGGTTTTTTCCATAACAGCTTTCATTGCTAAGGTTGTTGTCATCTTTGCTTTGCTGCTTCATGTGTCGTTCAATGTTTCTGCGATGAACGTCGTCGAAACCAATAGAGCTGCTCGGATAGCTATCAAAATTTGTGAGGGCCAATGGAGTGTCCAACCGAATACACAAATGATCTTTTGGGAAGGATCTCTTTATTGGAGCCACACTAAGATGAAAAGATCCAATATAGTTCGTAGTGGCGTTGGTCGGTTGGTGACCGGAAAGAAAACTCCAAGAAGAGAGAAGAGAATCTAG

Protein sequence

MVFSITAFIAKVVVIFALLLHVSFNVSAMNVVETNRAARIAIKICEGQWSVQPNTQMIFWEGSLYWSHTKMKRSNIVRSGVGRLVTGKKTPRREKRI
Homology
[Close]
BLAST of MELO3C031779.jh1 vs. NCBI nr
Match: KGN57257.1 (hypothetical protein Csa_010805 [Cucumis sativus])

HSP 1 Score: 54.3 bits (129), Expect = 4.25e-07
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 1  MVFSITAFIAKVVVIFALLLHVSFNVSAMN-VVETNRAARIAIK 43
          MVFSITAFI K VVIFALLL VSFNVSAMN +VETN+AARIA K
Sbjct: 1  MVFSITAFIPK-VVIFALLLLVSFNVSAMNQLVETNKAARIASK 43

[Close]
BLAST of MELO3C031779.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L9E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175580 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.06e-07
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 1  MVFSITAFIAKVVVIFALLLHVSFNVSAMN-VVETNRAARIAIK 43
          MVFSITAFI K VVIFALLL VSFNVSAMN +VETN+AARIA K
Sbjct: 1  MVFSITAFIPK-VVIFALLLLVSFNVSAMNQLVETNKAARIASK 43

The following BLAST results are available for this feature:
BLAST of MELO3C031779.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57257.14.25e-0784.09hypothetical protein Csa_010805 [Cucumis sativus][more]
BLAST of MELO3C031779.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031779.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9E52.06e-0784.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175580 PE=4 SV=1[more]
BLAST of MELO3C031779.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031779.jh1.t1MELO3C031779.jh1.t1mRNA