MELO3C031770 (gene) Melon (DHL92) v4

Overview
NameMELO3C031770
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Description3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Locationchr06: 5878868 .. 5880508 (-)
RNA-Seq ExpressionMELO3C031770
SyntenyMELO3C031770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCATGGACAACAGTACATTTTGAACTGGTTAACTGAACCAACTAAGCGCTCTCATCAGATGAATTCTGTTGCTGCTGAGGTCCTTGGTAAATTCACGCGTGCTTTTTGTAATGAACACTTGGCTACGTGTACTCATCTTAAAGGAATGGAGCACTTATATGTGAAGAGGTATTGTTTCAAATGGAAAAACATTGATATCGTAAGTATGTTTTGTGATCTATTTTATTATTATTATGAGGTAAATGCTTGTATATCCTAAAACCACAATCAAGGCTCAGTACATATTATGGTTAACAAAGAAAATCAACTATATGATCATTCGTAGATACTCTGCTTATGTCCAAATATCTTTGCTGCAACTAGCCTGAGTTCTAAAAGTGAGACTTCACCATTCAATTATTTCAACTTCATTTGCCACTTTGCTTGTATTTGATCCTTTGTTGATCTGCCTTTTCTTCTTCTATGTGATATGATATGATGCTTGTGTGTGACTTGTGAGTACATAAATAATAGAAACTTGGAACAATGGCTTCAAACAATTAGTGGTCAGAAAATGTCTCAACTTTTGATAAACTTGGAATACTGGAAATTTCTGATCCTTTTAGGTTCATATGCTCATATGAATTATGCATACATTAAGATCGACCTGTTGTGATTTTCAAGGACAAGAAGTTGAACAGCTCTGTAGGTAATTATCATTTGAGTTATATTGAAGTTATTTATGGAGAGACTTTAAAACTTGCATAGTGTCCTAATTAATATATTTAATGGGTAGATAATTTTCTGACATAAAATGGTTTATGTCTCCATTTTGTCGTGCTGCTATGATTGTAGCGTGCAGTCATCCTGAGGCAATAGGAATAGAGCCGTGGCTTATTCAGTGAACAATCCATTCACTTTCAGGTATAAAACATGGCATGGGACATCTATTGGCGGCAGGAATTTGACATTTGAGCAAGAGGTCAGACCAATCTAATTCATACTAGTCTAATAAGAATGAATCTTCTTGAATGAATTGATCTATTGTTGTATGTCCTATTCGAGCAAGAGGTCAGATCAATCTTAGAAAGACACATACGTAGGAAGACATTTATCTTCTCAATAGTAATACAACCTGAGATACAGGCATTACTATTGGCTTGCTGATGTTATTTATAAATATAGCTTTAGTCCTAATGATTGTTGCATAGTACAATAAAGAAGCTGACCATTCTTTAATTAGTTTGCTTCATCACAAACTTTATTTACAAAAGCCTTAAGATTCACAAAAGAAGAACCATTCGCAGCCTCCATTGCTAAGCGTTGCCATTTCGTAGCATTGATTCTCAGTTGCTTTCCTTTTCCTTTGCTATCGTCTTCCATATCCATAATCATTCTCAAGCATCTTGTAATCTCCTTTCTTTCTACCATTCCTTCACCATCACTACTCTTCTTCACTCTCACACCAATCTTCCATACATCCTCCATCATCTTGGCATTGGTGGCTTGGTCTGCCCACAACAGCCATGCCACTGTCGGCACTCCAACCGCTACACACTCGATCGTGAAATTCCATCCACAGTGTGTTACAAAGCAACCCACTGATCGGTGGCTCAAGATCTCTACCTGTGAGCACCATGGCACTATCTTCCCTTGA

mRNA sequence

ATGAAGCATGGACAACAGTACATTTTGAACTGGTTAACTGAACCAACTAAGCGCTCTCATCAGATGAATTCTGTTGCTGCTGAGGTCCTTGGTAAATTCACGCGTGCTTTTTGTAATGAACACTTGGCTACGTGTACTCATCTTAAAGGAATGGAGCACTTATATGTGAAGAGGTATAAAACATGGCATGGGACATCTATTGGCGGCAGGAATTTGACATTTGAGCAAGAGTTTGCTTCATCACAAACTTTATTTACAAAAGCCTTAAGATTCACAAAAGAAGAACCATTCGCAGCCTCCATTGCTAAGCGTTGCCATTTCGTAGCATTGATTCTCAGTTGCTTTCCTTTTCCTTTGCTATCGTCTTCCATATCCATAATCATTCTCAAGCATCTTGTAATCTCCTTTCTTTCTACCATTCCTTCACCATCACTACTCTTCTTCACTCTCACACCAATCTTCCATACATCCTCCATCATCTTGGCATTGGTGGCTTGGTCTGCCCACAACAGCCATGCCACTGTCGGCACTCCAACCGCTACACACTCGATCGTGAAATTCCATCCACAGTGTGTTACAAAGCAACCCACTGATCGGTGGCTCAAGATCTCTACCTGTGAGCACCATGGCACTATCTTCCCTTGA

Coding sequence (CDS)

ATGAAGCATGGACAACAGTACATTTTGAACTGGTTAACTGAACCAACTAAGCGCTCTCATCAGATGAATTCTGTTGCTGCTGAGGTCCTTGGTAAATTCACGCGTGCTTTTTGTAATGAACACTTGGCTACGTGTACTCATCTTAAAGGAATGGAGCACTTATATGTGAAGAGGTATAAAACATGGCATGGGACATCTATTGGCGGCAGGAATTTGACATTTGAGCAAGAGTTTGCTTCATCACAAACTTTATTTACAAAAGCCTTAAGATTCACAAAAGAAGAACCATTCGCAGCCTCCATTGCTAAGCGTTGCCATTTCGTAGCATTGATTCTCAGTTGCTTTCCTTTTCCTTTGCTATCGTCTTCCATATCCATAATCATTCTCAAGCATCTTGTAATCTCCTTTCTTTCTACCATTCCTTCACCATCACTACTCTTCTTCACTCTCACACCAATCTTCCATACATCCTCCATCATCTTGGCATTGGTGGCTTGGTCTGCCCACAACAGCCATGCCACTGTCGGCACTCCAACCGCTACACACTCGATCGTGAAATTCCATCCACAGTGTGTTACAAAGCAACCCACTGATCGGTGGCTCAAGATCTCTACCTGTGAGCACCATGGCACTATCTTCCCTTGA

Protein sequence

MKHGQQYILNWLTEPTKRSHQMNSVAAEVLGKFTRAFCNEHLATCTHLKGMEHLYVKRYKTWHGTSIGGRNLTFEQEFASSQTLFTKALRFTKEEPFAASIAKRCHFVALILSCFPFPLLSSSISIIILKHLVISFLSTIPSPSLLFFTLTPIFHTSSIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP
Homology
BLAST of MELO3C031770 vs. NCBI nr
Match: RYR16957.1 (hypothetical protein Ahy_B03g061784 [Arachis hypogaea])

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19
Identity = 69/138 (50.00%), Postives = 82/138 (59.42%), Query Frame = 0

Query: 80  SSQTLFTKALRFTKEEP--FAASIAKRCHFVALILSCFPFPLLSSSISIIILKHLVISFL 139
           +++ L+   LRF  EEP  F AS+A   HF     +  P P+ +S       +HL IS  
Sbjct: 3   NNKKLYIFLLRFCSEEPPSFTASLANIFHF---SFAFSPLPITTS-------RHLFISPA 62

Query: 140 STIPSPSLLF-FTLTPIFHTSSIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQP 199
           ST PS S     TLTP+FHTSSI  A V WS H  +AT+GTP A  SIV+F PQCVTK P
Sbjct: 63  STTPSSSSSSRSTLTPVFHTSSISFAFVFWSTHCGNATIGTPDAKLSIVEFQPQCVTKHP 122

Query: 200 TDRWLKISTCEHHGTIFP 215
            D   K STCEHH TIFP
Sbjct: 123 NDPCDKTSTCEHHSTIFP 130

BLAST of MELO3C031770 vs. NCBI nr
Match: RYR23552.1 (hypothetical protein Ahy_B03g068754 [Arachis hypogaea])

HSP 1 Score: 105.1 bits (261), Expect = 7.4e-19
Identity = 66/119 (55.46%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 97  FAASIAKRCHFVALILSCFPFPLLSSSISIIILKHLVISFLSTIPSP-SLLFFTLTPIFH 156
           F AS+A   H  A  LS F F    S + I I KHL IS  ST PS  S L  TLTP+FH
Sbjct: 20  FTASLANLFHLSAFSLSSFAF----SPLPITISKHLFISPASTTPSSFSSLRSTLTPVFH 79

Query: 157 TSSIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP 215
           TSS   A V WS H  +AT+GTP A  SIV+F PQCVTK P +   K STCEHH TIFP
Sbjct: 80  TSSTSFAFVFWSNHCGNATIGTPDAKLSIVEFQPQCVTKHPNEPCDKTSTCEHHSTIFP 134

BLAST of MELO3C031770 vs. NCBI nr
Match: RYR23553.1 (hypothetical protein Ahy_B03g068755 [Arachis hypogaea])

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-15
Identity = 57/105 (54.29%), Postives = 65/105 (61.90%), Query Frame = 0

Query: 111 ILSCFPFPLLSSSISIIILKHLVISFLSTIPSPSLLF-FTLTPIFHTSSIILALVAWSAH 170
           ++S F F    S + I   +HL IS  ST PS S     TLTP+FHTSS   A V WS H
Sbjct: 1   MVSSFAF----SPLPITTSRHLFISPASTTPSSSSSSRSTLTPVFHTSSTSFAFVFWSTH 60

Query: 171 NSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP 215
             +AT+GTP A  SIV+F PQCVTK P D   K STCEHH TIFP
Sbjct: 61  CGNATIGTPDAKLSIVEFQPQCVTKHPNDPCDKTSTCEHHSTIFP 101

BLAST of MELO3C031770 vs. NCBI nr
Match: RZS14066.1 (hypothetical protein BHM03_00045722, partial [Ensete ventricosum])

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-12
Identity = 60/131 (45.80%), Postives = 71/131 (54.20%), Query Frame = 0

Query: 84  LFTKALRFTKEEPFAASIAKRCHFVALILSCFPFPLLSSSISIIILKHLVISFLSTIPSP 143
           L T ALR   ++P + + ++   F    L    FPL  S I+  + KHL+ S  S IPSP
Sbjct: 32  LATNALRLQSDDPPSPTASRAFSFHISALRRISFPLSPSPIT--VSKHLLSSAPSRIPSP 91

Query: 144 SLLFFTLTPIFHTSSIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKI 203
           S     LTP+ H SS  LALV WS H    TVGTP A  S V+F PQCVTK PT      
Sbjct: 92  S--SSPLTPVPH-SSTSLALVLWSDHCGVVTVGTPHAMLSTVEFQPQCVTKHPTAGCDST 151

Query: 204 STCEHHGTIFP 215
            TCEHH T  P
Sbjct: 152 RTCEHHSTTMP 157

BLAST of MELO3C031770 vs. NCBI nr
Match: GAV90605.1 (hypothetical protein CFOL_v3_34014 [Cephalotus follicularis])

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-11
Identity = 56/117 (47.86%), Postives = 65/117 (55.56%), Query Frame = 0

Query: 99  ASIAKRCHFVAL-ILSCFPFPLLSSSISIIILKHLVISFLSTIPSPSLLFFTLTPIFHTS 158
           AS A   H V L ++S   FP      SI   KH++ S L TIP  S   FTLTP    S
Sbjct: 12  ASFANLLHLVELFLISWLLFP------SITCFKHIINSSLLTIPFSS--SFTLTPTPQIS 71

Query: 159 SIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP 215
           SI  A   WSAH    T+GTP  + S V+FHPQCVTKQP     +IS+C HH TI P
Sbjct: 72  SINFAFGNWSAHCGKPTIGTPRLSPSSVEFHPQCVTKQPMALCARISSCLHHVTISP 120

BLAST of MELO3C031770 vs. ExPASy TrEMBL
Match: A0A444ZRZ5 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g061784 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.2e-20
Identity = 69/138 (50.00%), Postives = 82/138 (59.42%), Query Frame = 0

Query: 80  SSQTLFTKALRFTKEEP--FAASIAKRCHFVALILSCFPFPLLSSSISIIILKHLVISFL 139
           +++ L+   LRF  EEP  F AS+A   HF     +  P P+ +S       +HL IS  
Sbjct: 3   NNKKLYIFLLRFCSEEPPSFTASLANIFHF---SFAFSPLPITTS-------RHLFISPA 62

Query: 140 STIPSPSLLF-FTLTPIFHTSSIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQP 199
           ST PS S     TLTP+FHTSSI  A V WS H  +AT+GTP A  SIV+F PQCVTK P
Sbjct: 63  STTPSSSSSSRSTLTPVFHTSSISFAFVFWSTHCGNATIGTPDAKLSIVEFQPQCVTKHP 122

Query: 200 TDRWLKISTCEHHGTIFP 215
            D   K STCEHH TIFP
Sbjct: 123 NDPCDKTSTCEHHSTIFP 130

BLAST of MELO3C031770 vs. ExPASy TrEMBL
Match: A0A445AB88 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g068754 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-19
Identity = 66/119 (55.46%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 97  FAASIAKRCHFVALILSCFPFPLLSSSISIIILKHLVISFLSTIPSP-SLLFFTLTPIFH 156
           F AS+A   H  A  LS F F    S + I I KHL IS  ST PS  S L  TLTP+FH
Sbjct: 20  FTASLANLFHLSAFSLSSFAF----SPLPITISKHLFISPASTTPSSFSSLRSTLTPVFH 79

Query: 157 TSSIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP 215
           TSS   A V WS H  +AT+GTP A  SIV+F PQCVTK P +   K STCEHH TIFP
Sbjct: 80  TSSTSFAFVFWSNHCGNATIGTPDAKLSIVEFQPQCVTKHPNEPCDKTSTCEHHSTIFP 134

BLAST of MELO3C031770 vs. ExPASy TrEMBL
Match: A0A445AAQ9 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g068755 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 57/105 (54.29%), Postives = 65/105 (61.90%), Query Frame = 0

Query: 111 ILSCFPFPLLSSSISIIILKHLVISFLSTIPSPSLLF-FTLTPIFHTSSIILALVAWSAH 170
           ++S F F    S + I   +HL IS  ST PS S     TLTP+FHTSS   A V WS H
Sbjct: 1   MVSSFAF----SPLPITTSRHLFISPASTTPSSSSSSRSTLTPVFHTSSTSFAFVFWSTH 60

Query: 171 NSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP 215
             +AT+GTP A  SIV+F PQCVTK P D   K STCEHH TIFP
Sbjct: 61  CGNATIGTPDAKLSIVEFQPQCVTKHPNDPCDKTSTCEHHSTIFP 101

BLAST of MELO3C031770 vs. ExPASy TrEMBL
Match: A0A1Q3DDV3 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34014 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 9.5e-12
Identity = 56/117 (47.86%), Postives = 65/117 (55.56%), Query Frame = 0

Query: 99  ASIAKRCHFVAL-ILSCFPFPLLSSSISIIILKHLVISFLSTIPSPSLLFFTLTPIFHTS 158
           AS A   H V L ++S   FP      SI   KH++ S L TIP  S   FTLTP    S
Sbjct: 12  ASFANLLHLVELFLISWLLFP------SITCFKHIINSSLLTIPFSS--SFTLTPTPQIS 71

Query: 159 SIILALVAWSAHNSHATVGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP 215
           SI  A   WSAH    T+GTP  + S V+FHPQCVTKQP     +IS+C HH TI P
Sbjct: 72  SINFAFGNWSAHCGKPTIGTPRLSPSSVEFHPQCVTKQPMALCARISSCLHHVTISP 120

BLAST of MELO3C031770 vs. ExPASy TrEMBL
Match: A0A0N7KR44 (Os09g0518266 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0518266 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-11
Identity = 49/100 (49.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query: 115 FPFPLLSSSISIIILKHLVISFLSTIPSPSLLFFTLTPIFHTSSIILALVAWSAHNSHAT 174
           F    L  S SI  L HL  S   T PSPS    T TP  HTSS+ LA + WS H   AT
Sbjct: 13  FSMNSLLLSPSITSLTHLSNSSFLTTPSPS--GRTRTPTRHTSSMYLAFIVWSDHCGTAT 72

Query: 175 VGTPTATHSIVKFHPQCVTKQPTDRWLKISTCEHHGTIFP 215
           +GTP    S+V+FHPQCVTK PT      S+C HH T+ P
Sbjct: 73  IGTPALNPSVVEFHPQCVTKHPTAGCASTSSCGHHVTMSP 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RYR16957.11.5e-1950.00hypothetical protein Ahy_B03g061784 [Arachis hypogaea][more]
RYR23552.17.4e-1955.46hypothetical protein Ahy_B03g068754 [Arachis hypogaea][more]
RYR23553.12.9e-1554.29hypothetical protein Ahy_B03g068755 [Arachis hypogaea][more]
RZS14066.11.8e-1245.80hypothetical protein BHM03_00045722, partial [Ensete ventricosum][more]
GAV90605.12.0e-1147.86hypothetical protein CFOL_v3_34014 [Cephalotus follicularis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A444ZRZ57.2e-2050.00Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g061784 PE=4 SV=1[more]
A0A445AB883.6e-1955.46Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g068754 PE=4 SV=1[more]
A0A445AAQ91.4e-1554.29Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g068755 PE=4 SV=1[more]
A0A1Q3DDV39.5e-1247.86Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_34014 PE=4... [more]
A0A0N7KR442.8e-1149.00Os09g0518266 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0518266 PE... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031770.1MELO3C031770.1mRNA