MELO3C031731 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031731
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pyridoxal kinase
Location	chr06: 13870240 .. 13870863 (-)
RNA-Seq Expression	MELO3C031731
Synteny	MELO3C031731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTACTTGTTCATTCAAATGGTCTTAGAACTCTGAGGCTTAATTATATACGGTGCGGTGCCTTATGTCATTATGCATAGGTTCTGGTTTGATTTTGTTGTGTTACTGAAATTGGATTATGGTTCCTTTTGAAAATAAAACAGGGTATCCGACATTTAAGGGCCAAGTTTTGAATGGAGGACAATTATGGGACTTAATTGAAGGCCTTGAAGAAAATGAATTGTTGTACTACACTCATTTGTTAACAGGTACTTCAGTTTTTCATTAAGTGACTTTTCGTGTGGAGTATAATTTGGTGACTTGGTGACTTTACAATATGAGGCTTTACCTATGAATTGCATGTTGCTACATAATAGCGGGCAGAAAAGAATAAATGTCTGCTAGAAAAGAAGAACTATGCTAAACTATTGCCAGCATTACGTATAAAGCTACTGCAGTAATTTGCATACTGTAAAATTGGCTACTCTTATTTTTCAGCTAATGTGAGATTTGTTGTAATATGGTACCTATGGATTTTGCAGGATATATTGGTTCTGTTTCTTTCCTCAACACAGTGTTGGAAGTTGTCGATAAGCTTCGCTTGGTGAACCCTAAGCTAACATATGGTCAGATAAATTCAA

mRNA sequence

ATGATTCTACTTGTTCATTCAAATGGGTATCCGACATTTAAGGGCCAAGTTTTGAATGGAGGACAATTATGGGACTTAATTGAAGGCCTTGAAGAAAATGAATTGTTGTACTACACTCATTTGTTAACAGGATATATTGGTTCTGTTTCTTTCCTCAACACAGTGTTGGAAGTTGTCGATAAGCTTCGCTTGGTGAACCCTAAGCTAACATATGGTCAGATAAATTCAA

Coding sequence (CDS)

ATGATTCTACTTGTTCATTCAAATGGGTATCCGACATTTAAGGGCCAAGTTTTGAATGGAGGACAATTATGGGACTTAATTGAAGGCCTTGAAGAAAATGAATTGTTGTACTACACTCATTTGTTAACAGGATATATTGGTTCTGTTTCTTTCCTCAACACAGTGTTGGAAGTTGTCGATAAGCTTCGCTTGGTGAACCCTAAGCTAACATATGGTCAGATAAATTCA

Protein sequence

MILLVHSNGYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPKLTYGQINS

Homology

[Close]

BLAST of MELO3C031731 vs. NCBI nr
Match: KAG7017950.1 (Pyridoxal kinase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.3 bits (334), Expect = 9.0e-28
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 1   MILLVHSNGYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVD 60
           +IL +HSNGYPTFKGQVLNG QLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVL+VVD
Sbjct: 60  LILFLHSNGYPTFKGQVLNGEQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLKVVD 119

Query: 61  KLRLVNPKLTY 72
           KLR  NPKL Y
Sbjct: 120 KLRSANPKLIY 130

[Close]

BLAST of MELO3C031731 vs. NCBI nr
Match: XP_008457077.1 (PREDICTED: pyridoxal kinase [Cucumis melo] >KAA0060743.1 pyridoxal kinase [Cucumis melo var. makuwa] >TYK01484.1 pyridoxal kinase [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK
Sbjct: 58  GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. NCBI nr
Match: XP_038875447.1 (pyridoxal kinase [Benincasa hispida])

HSP 1 Score: 131.0 bits (328), Expect = 4.5e-27
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVL+VVDKLRLVNPK
Sbjct: 58  GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLKVVDKLRLVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. NCBI nr
Match: XP_011651430.1 (pyridoxal kinase isoform X2 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNG QLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK
Sbjct: 58  GYPTFKGQVLNGRQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. NCBI nr
Match: XP_004149445.1 (pyridoxal kinase isoform X1 [Cucumis sativus] >KGN57886.1 hypothetical protein Csa_011119 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNG QLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK
Sbjct: 58  GYPTFKGQVLNGRQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. ExPASy Swiss-Prot
Match: Q8W1X2 (Pyridoxal kinase OS=Arabidopsis thaliana OX=3702 GN=PK PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-23
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNG QL DLIEGLE N+LL+YTH+LTGYIGSVSFL+T+LEV++KLR VNP 
Sbjct: 59  GYPTFKGQVLNGQQLCDLIEGLEANDLLFYTHVLTGYIGSVSFLDTILEVINKLRSVNPN 118

Query: 69  LTY 72
           LTY
Sbjct: 119 LTY 121

[Close]

BLAST of MELO3C031731 vs. ExPASy Swiss-Prot
Match: Q55EK9 (Pyridoxal kinase OS=Dictyostelium discoideum OX=44689 GN=pykA PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-11
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 4   LVHSNGYPTFKGQVLNGGQLWDLIEGLEENELL-YYTHLLTGYIGSVSFLNTVLEVVDKL 63
           L ++  YPT+KG+ L   +L DL +GLE+N L   YTH+LTGY  SV  L+TVL++V KL
Sbjct: 41  LSNNTAYPTWKGESLTPNKLGDLFQGLEDNHLTSNYTHVLTGYNNSVQTLHTVLKIVKKL 100

Query: 64  RLVNPKLTY 72
           +  NP L Y
Sbjct: 101 KSENPNLIY 109

[Close]

BLAST of MELO3C031731 vs. ExPASy Swiss-Prot
Match: O00764 (Pyridoxal kinase OS=Homo sapiens OX=9606 GN=PDXK PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.5e-09
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GY  +KGQVLN  +L +L EGL  N +  Y ++LTGY    SFL  V+++V +L+  NP+
Sbjct: 48  GYAHWKGQVLNSDELQELYEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPR 107

Query: 69  LTY 72
           L Y
Sbjct: 108 LVY 110

[Close]

BLAST of MELO3C031731 vs. ExPASy Swiss-Prot
Match: Q1PCB1 (Pyridoxal kinase OS=Bombyx mori OX=7091 GN=Pdxk PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-08
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 10  YPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPKL 69
           Y   KG VLN  Q+ +L+EGL  NE+ YYTH LTGY  S   L  + +++ +LR  NP L
Sbjct: 51  YKHIKGYVLNNDQMKELVEGLVLNEVDYYTHFLTGYSRSPDSLREIAKIIKQLREKNPNL 110

Query: 70  TY 72
            Y
Sbjct: 111 IY 112

[Close]

BLAST of MELO3C031731 vs. ExPASy Swiss-Prot
Match: Q0II59 (Pyridoxal kinase OS=Bos taurus OX=9913 GN=PDXK PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-08
Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GY  +KGQVLN  +L +L +GL+ N +  Y ++LTGY    SFL  V+++V +L+  NP+
Sbjct: 48  GYSHWKGQVLNSDELQELYDGLKLNSVNQYDYVLTGYTRDKSFLAMVVDIVQELKQQNPR 107

Query: 69  LTY 72
           L Y
Sbjct: 108 LVY 110

[Close]

BLAST of MELO3C031731 vs. ExPASy TrEMBL
Match: A0A5D3BQN4 (Pyridoxal kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00360 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.5e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK
Sbjct: 58  GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. ExPASy TrEMBL
Match: A0A1S3C498 (Pyridoxal kinase OS=Cucumis melo OX=3656 GN=LOC103496845 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.5e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK
Sbjct: 58  GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. ExPASy TrEMBL
Match: A0A0A0LCU0 (Pyridoxal kinase OS=Cucumis sativus OX=3659 GN=Csa_3G363190 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.3e-27
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNG QLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK
Sbjct: 58  GYPTFKGQVLNGRQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. ExPASy TrEMBL
Match: A0A6J1KGY9 (Pyridoxal kinase OS=Cucurbita maxima OX=3661 GN=LOC111493128 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVL+VVDKLR VNPK
Sbjct: 58  GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLKVVDKLRSVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. ExPASy TrEMBL
Match: A0A6J1G9F5 (Pyridoxal kinase OS=Cucurbita moschata OX=3662 GN=LOC111452161 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.1e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVL+VV+KLR VNPK
Sbjct: 58  GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLKVVEKLRSVNPK 117

Query: 69  LTY 72
           LTY
Sbjct: 118 LTY 120

[Close]

BLAST of MELO3C031731 vs. TAIR 10
Match: AT5G37850.1 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-24
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNG QL DLIEGLE N+LL+YTH+LTGYIGSVSFL+T+LEV++KLR VNP 
Sbjct: 93  GYPTFKGQVLNGQQLCDLIEGLEANDLLFYTHVLTGYIGSVSFLDTILEVINKLRSVNPN 152

Query: 69  LTY 72
           LTY
Sbjct: 153 LTY 155

[Close]

BLAST of MELO3C031731 vs. TAIR 10
Match: AT5G37850.2 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-24
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLTGYIGSVSFLNTVLEVVDKLRLVNPK 68
           GYPTFKGQVLNG QL DLIEGLE N+LL+YTH+LTGYIGSVSFL+T+LEV++KLR VNP 
Sbjct: 59  GYPTFKGQVLNGQQLCDLIEGLEANDLLFYTHVLTGYIGSVSFLDTILEVINKLRSVNPN 118

Query: 69  LTY 72
           LTY
Sbjct: 119 LTY 121

[Close]

BLAST of MELO3C031731 vs. TAIR 10
Match: AT5G37850.3 (pfkB-like carbohydrate kinase family protein )

HSP 1 Score: 64.7 bits (156), Expect = 3.7e-11
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 9   GYPTFKGQVLNGGQLWDLIEGLEENELLYYTHLLT 44
           GYPTFKGQVLNG QL DLIEGLE N+LL+YTH+LT
Sbjct: 93  GYPTFKGQVLNGQQLCDLIEGLEANDLLFYTHVLT 127

The following BLAST results are available for this feature:

BLAST of MELO3C031731 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017950.1	9.0e-28	88.73	Pyridoxal kinase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008457077.1	1.5e-27	100.00	PREDICTED: pyridoxal kinase [Cucumis melo] >KAA0060743.1 pyridoxal kinase [Cucum...	[more]
XP_038875447.1	4.5e-27	98.41	pyridoxal kinase [Benincasa hispida]	[more]
XP_011651430.1	1.3e-26	98.41	pyridoxal kinase isoform X2 [Cucumis sativus]	[more]
XP_004149445.1	1.3e-26	98.41	pyridoxal kinase isoform X1 [Cucumis sativus] >KGN57886.1 hypothetical protein C...	[more]

BLAST of MELO3C031731 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W1X2	1.8e-23	80.95	Pyridoxal kinase OS=Arabidopsis thaliana OX=3702 GN=PK PE=1 SV=2	[more]
Q55EK9	2.1e-11	50.72	Pyridoxal kinase OS=Dictyostelium discoideum OX=44689 GN=pykA PE=1 SV=1	[more]
O00764	7.5e-09	46.03	Pyridoxal kinase OS=Homo sapiens OX=9606 GN=PDXK PE=1 SV=1	[more]
Q1PCB1	1.3e-08	46.77	Pyridoxal kinase OS=Bombyx mori OX=7091 GN=Pdxk PE=1 SV=1	[more]
Q0II59	1.3e-08	44.44	Pyridoxal kinase OS=Bos taurus OX=9913 GN=PDXK PE=2 SV=1	[more]

BLAST of MELO3C031731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQN4	7.5e-28	100.00	Pyridoxal kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G003...	[more]
A0A1S3C498	7.5e-28	100.00	Pyridoxal kinase OS=Cucumis melo OX=3656 GN=LOC103496845 PE=3 SV=1	[more]
A0A0A0LCU0	6.3e-27	98.41	Pyridoxal kinase OS=Cucumis sativus OX=3659 GN=Csa_3G363190 PE=3 SV=1	[more]
A0A6J1KGY9	1.1e-26	96.83	Pyridoxal kinase OS=Cucurbita maxima OX=3661 GN=LOC111493128 PE=3 SV=1	[more]
A0A6J1G9F5	3.1e-26	95.24	Pyridoxal kinase OS=Cucurbita moschata OX=3662 GN=LOC111452161 PE=3 SV=1	[more]

BLAST of MELO3C031731 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37850.1	1.3e-24	80.95	pfkB-like carbohydrate kinase family protein	[more]
AT5G37850.2	1.3e-24	80.95	pfkB-like carbohydrate kinase family protein	[more]
AT5G37850.3	3.7e-11	82.86	pfkB-like carbohydrate kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029056	Ribokinase-like	GENE3D	3.40.1190.20		coord: 2..72 e-value: 5.6E-15 score: 57.4
IPR029056	Ribokinase-like	SUPERFAMILY	53613	Ribokinase-like	coord: 4..70
IPR004625	Pyridoxine kinase	PANTHER	PTHR10534	PYRIDOXAL KINASE	coord: 7..71
None	No IPR available	PANTHER	PTHR10534:SF2	PYRIDOXAL KINASE	coord: 7..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031731.1	MELO3C031731.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009443	pyridoxal 5'-phosphate salvage
molecular_function	GO:0008478	pyridoxal kinase activity