MELO3C031708 (gene) Melon (DHL92) v4

Overview
NameMELO3C031708
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionBTB/POZ domain-containing protein
Locationchr06: 11858825 .. 11859170 (+)
RNA-Seq ExpressionMELO3C031708
SyntenyMELO3C031708
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTAAAAAACGGAAGAACAAATACGCCGGAAAGTTTTACAGAAAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA

mRNA sequence

AAAACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTAAAAAACGGAAGAACAAATACGCCGGAAAGTTTTACAGAAAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGAAGGGAATGCATAACATGTATTAA

Coding sequence (CDS)

AACAGAGGAAAAATCCAAAGGTTGAAGAAGGAACAAAAGTGTGAAACGAAACAACTCACCGATACTTTGGGTGGTGCAAACCGATTAAAAAAGGAAGGGCGTGCAAACGGTGGAAAAGTGACGGAAGAGAAATCGATGGAGGAAAAGTGTCGAAAGAGAAAGCGACGGTGGAAAAACGGAAGAGAAAGCTACGGTAGAAAAGCGACGGTGGAAATGCGCCGGAAAGCCTTTAAAAAACGGAAGAACAAATACGCCGGAAAGTTTTACAGAAAGTTTTACAGAAGATGGTTTATTTTTTTGGGAGGAAAATTAGAAAATTGA

Protein sequence

NRGKIQRLKKEQKCETKQLTDTLGGANRLKKEGRANGGKVTEEKSMEEKCRKRKRRWKNGRESYGRKATVEMRRKAFKKRKNKYAGKFYRKFYRRWFIFLGGKLEN
Homology
BLAST of MELO3C031708 vs. NCBI nr
Match: KAA0063265.1 (BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK31509.1 BTB/POZ domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 0

Query: 4   KIQRLKKEQKCETKQLTDTLGGANRLKKEGRANGGKVTEEKSMEEKCRKRKRRWKNGRES 63
           K  RLK EQK ETKQLT TLGGANRLKKEGRA+GGK T+EK   EK RKRKRRWKNGRES
Sbjct: 78  KSTRLKIEQKLETKQLTHTLGGANRLKKEGRADGGKATKEKPTVEKRRKRKRRWKNGRES 137

Query: 64  YGRK 68
           YG K
Sbjct: 138 YGGK 141

BLAST of MELO3C031708 vs. NCBI nr
Match: KAA0025432.1 (uncharacterized protein E6C27_scaffold417G00170 [Cucumis melo var. makuwa] >TYK04751.1 uncharacterized protein E5676_scaffold68G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-05
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 46  MEEKCRKRKRRWKNGRESYGRKATVEMR----RKAFKKRKNKYAGKFYRKFYRRWFIFLG 105
           M EK RKRKRRWKNGRESYG KA  E R    R+  K+R  + +G      YRRWFIFLG
Sbjct: 1   MVEKRRKRKRRWKNGRESYGGKAMEEKRMVKKRRKRKRRWKRDSGNVLESLYRRWFIFLG 60

BLAST of MELO3C031708 vs. NCBI nr
Match: TYK07333.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-05
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 42 EEKSMEEKCRKRKRRWKNGRESYGRKATVEMRRKAFKKRKNKYAGKFYRK 92
          +EK M    RKRKRRWKNG+ESYG KATVEMR+KAFKKRKNK  GK  +K
Sbjct: 2  KEKPMVACRRKRKRRWKNGKESYGGKATVEMRQKAFKKRKNKCTGKPLQK 51

BLAST of MELO3C031708 vs. NCBI nr
Match: KAA0039218.1 (Proton-dependent oligopeptide transporter family [Cucumis melo var. makuwa] >TYK00406.1 Proton-dependent oligopeptide transporter family [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 2.6e-04
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 0

Query: 7  RLKKEQK-------CETKQLTDTLGGANRLKKEGRANGGKVTEEKSMEEKCRKRKRRWKN 60
          RLKKEQK        E K+  DTLGGAN+LKKEGRA+ GKVTE+K M EK RK  ++WKN
Sbjct: 5  RLKKEQKHPKVEEGTEAKKPIDTLGGANQLKKEGRADDGKVTEKKPMVEK-RKAFKKWKN 63

BLAST of MELO3C031708 vs. ExPASy TrEMBL
Match: A0A5D3E6N5 (BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008270 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.7e-15
Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 0

Query: 4   KIQRLKKEQKCETKQLTDTLGGANRLKKEGRANGGKVTEEKSMEEKCRKRKRRWKNGRES 63
           K  RLK EQK ETKQLT TLGGANRLKKEGRA+GGK T+EK   EK RKRKRRWKNGRES
Sbjct: 78  KSTRLKIEQKLETKQLTHTLGGANRLKKEGRADGGKATKEKPTVEKRRKRKRRWKNGRES 137

Query: 64  YGRK 68
           YG K
Sbjct: 138 YGGK 141

BLAST of MELO3C031708 vs. ExPASy TrEMBL
Match: A0A5A7SJS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00530 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.0e-06
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 46  MEEKCRKRKRRWKNGRESYGRKATVEMR----RKAFKKRKNKYAGKFYRKFYRRWFIFLG 105
           M EK RKRKRRWKNGRESYG KA  E R    R+  K+R  + +G      YRRWFIFLG
Sbjct: 1   MVEKRRKRKRRWKNGRESYGGKAMEEKRMVKKRRKRKRRWKRDSGNVLESLYRRWFIFLG 60

BLAST of MELO3C031708 vs. ExPASy TrEMBL
Match: A0A5D3C603 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00490 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.0e-06
Identity = 36/50 (72.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 42 EEKSMEEKCRKRKRRWKNGRESYGRKATVEMRRKAFKKRKNKYAGKFYRK 92
          +EK M    RKRKRRWKNG+ESYG KATVEMR+KAFKKRKNK  GK  +K
Sbjct: 2  KEKPMVACRRKRKRRWKNGKESYGGKATVEMRQKAFKKRKNKCTGKPLQK 51

BLAST of MELO3C031708 vs. ExPASy TrEMBL
Match: A0A5A7T8K1 (Proton-dependent oligopeptide transporter family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00050 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 0

Query: 7  RLKKEQK-------CETKQLTDTLGGANRLKKEGRANGGKVTEEKSMEEKCRKRKRRWKN 60
          RLKKEQK        E K+  DTLGGAN+LKKEGRA+ GKVTE+K M EK RK  ++WKN
Sbjct: 5  RLKKEQKHPKVEEGTEAKKPIDTLGGANQLKKEGRADDGKVTEKKPMVEK-RKAFKKWKN 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0063265.11.6e-1479.69BTB/POZ domain-containing protein [Cucumis melo var. makuwa] >TYK31509.1 BTB/POZ... [more]
KAA0025432.11.0e-0558.73uncharacterized protein E6C27_scaffold417G00170 [Cucumis melo var. makuwa] >TYK0... [more]
TYK07333.11.0e-0572.00putative nuclease HARBI1 [Cucumis melo var. makuwa][more]
KAA0039218.12.6e-0461.67Proton-dependent oligopeptide transporter family [Cucumis melo var. makuwa] >TYK... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E6N57.7e-1579.69BTB/POZ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7SJS05.0e-0658.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C6035.0e-0672.00Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7T8K11.2e-0461.67Proton-dependent oligopeptide transporter family OS=Cucumis melo var. makuwa OX=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031708.1MELO3C031708.1mRNA