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MELO3C031666 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTGATATATGTATGTTGCAACTATGTAGCTATTCATACATGGCTTTCTTAACATTCATATACTCCTCTAAACTCAAGCATTATAATTAGTTAAAATTTTAAAAGTTATGATAAGATGTTGAACAATGAAGCTCACACCAACTCAAATGAAGAGGAAAATGAAACACATGTCGGAAATTCATGGGATAACATTCAAAATCAAGCCAGTCAAGAGGCAATCATTATGACTCAAGGCTGAATGACAAAAGCTAGAGCTAAAAGACTTCAAGATTGATTAAATGATTGTTTACAAGCTAGATTTTTGGACTTCAATAAAGATTTGGAACTTCAAGAGTCACTTGGACACCCAAGGGTCATAA TTTATTGATATATGTATGTTGCAACTATGTAGCTATTCATACATGGCTTTCTTAACATTCATATACTCCTCTAAACTCAAGCATTATAATTAGTTAAAATTTTAAAAGTTATGATAAGATGTTGAACAATGAAGCTCACACCAACTCAAATGAAGAGGAAAATGAAACACATGTCGGAAATTCATGGGATAACATTCAAAATCAAGCCAGTCAAGAGGCAATCATTATGACTCAAGGCTGAATGACAAAAGCTAGAGCTAAAAGACTTCAAGATTGATTAAATGATTGTTTACAAGCTAGATTTTTGGACTTCAATAAAGATTTGGAACTTCAAGAGTCACTTGGACACCCAAGGGTCATAA ATGTTGAACAATGAAGCTCACACCAACTCAAATGAAGAGGAAAATGAAACACATGTCGGAAATTCATGGGATAACATTCAAAATCAAGCCAGTCAAGAGGCAATCATTATGACTCAAGGCTGA MLNNEAHTNSNEEENETHVGNSWDNIQNQASQEAIIMTQG Homology
BLAST of MELO3C031666 vs. NCBI nr
Match: TYK19543.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 70.1 bits (170), Expect = 4.9e-09 Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 0
BLAST of MELO3C031666 vs. NCBI nr
Match: TYK15114.1 (Zinc finger, CCHC-type [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
BLAST of MELO3C031666 vs. NCBI nr
Match: KAA0065903.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
BLAST of MELO3C031666 vs. NCBI nr
Match: TYK14528.1 (integrase [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MELO3C031666 vs. ExPASy TrEMBL
Match: A0A5D3D7R5 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00380 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-09 Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 0
BLAST of MELO3C031666 vs. ExPASy TrEMBL
Match: A0A5D3CW05 (Zinc finger, CCHC-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00430 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
BLAST of MELO3C031666 vs. ExPASy TrEMBL
Match: A0A5A7VCL9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00820 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
BLAST of MELO3C031666 vs. ExPASy TrEMBL
Match: A0A5D3CTJ1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00060 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.5e-06 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MELO3C031666 vs. ExPASy TrEMBL
Match: A0A5D3B744 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001050 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 8.8e-04 Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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