MELO3C031545 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031545
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	chr05: 25775022 .. 25775850 (+)
RNA-Seq Expression	MELO3C031545
Synteny	MELO3C031545

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGTGGTCGCTTGGACTTCCTTAATTGCAGGGTTTGTGAACAACGATCAGCCCAAAGAAGCTTTAAGATTGTTCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGACCACTGCCTTGGCTGCAGCTGCTCATTGTAGGGATATCTGTACTGGGAAGCTGGTCCGCAATCGTCTTCGCCAACTTGGTTTTGATCCATTTGACACAAACTCTCGCTTCAATGTAATACTTGCAACTGCAATCATGGACATGTATGCAAAATGTGGCAAGTTGGTGACTGCACGGAATATGTTTGACAAGATGCCTCAAAGAAACTTGGTTGTTTGGAATTCAATGGTTAGTGCTTACAGTCAATATGGTCGAGGAGCAGAGGCTTTGCGTCTTTTCGTTGACATGGAACTGGCTGGGTTTGTTCCTAATAAAGCAACGTTTTTTAGTGTGATAAGAGCTTACACCCATCTGGGGTTTTGATCAACAGGACGAAGTTTACATGCTCGTGTGTTGAAAGCAGATTTCCATGAGCCATTGGAACTGCTCTTGTGGACATGTATGCCAAAGGTGAACGTGAGTTGGAAGAGGGGCCGACAGTCAGTAACTATTAAGCTAACTGTAAATATTGAAAATTAAATAGTTTTTTTTATATATATATTATATAAAGATAATAAAGTTGAAGAGAGCTTGAGCTCTCGGACCTATACTAAATTCTCCGGTAGCTGGAGATGCAAATTCTGAGTTGAAGATCTTCAGCAAGTCGAAGAAGAAAGATGTAATGGCGTGGACGATGATGATATCAGGCTTAACATTTCAATGCTAA

mRNA sequence

ATGGAATGTGGTCGCTTGGACTTCCTTAATTGCAGGGTTTGTGAACAACGATCAGCCCAAAGAAGCTTTAAGATTGTTCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGACCACTGCCTTGGCTGCAGCTGCTCATTGTAGGGATATCTGTACTGGGAAGCTGGTCCGCAATCGTCTTCGCCAACTTGGTTTTGATCCATTTGACACAAACTCTCGCTTCAATGTAATACTTGCAACTGCAATCATGGACATGTATGCAAAATGTGGCAAGTTGGTGACTGCACGGAATATGTTTGACAAGATGCCTCAAAGAAACTTGGTTGTTTGGAATTCAATGGTTAGTGCTTACAGTCAATATGGTCGAGGAGCAGAGGCTTTGCGTCTTTTCGTTGACATGGAACTGGCTGGGTTTGTTCCTAATAAAGCAACGTTTTTTAATAATAAAGTTGAAGAGAGCTTGAGCTCTCGGACCTATACTAAATTCTCCGGTAGCTGGAGATGCAAATTCTGAGTTGAAGATCTTCAGCAAGTCGAAGAAGAAAGATGTAATGGCGTGGACGATGATGATATCAGGCTTAACATTTCAATGCTAA

Coding sequence (CDS)

ATGGAATGTGGTCGCTTGGACTTCCTTAATTGCAGGGTTTGTGAACAACGATCAGCCCAAAGAAGCTTTAAGATTGTTCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGACCACTGCCTTGGCTGCAGCTGCTCATTGTAGGGATATCTGTACTGGGAAGCTGGTCCGCAATCGTCTTCGCCAACTTGGTTTTGATCCATTTGACACAAACTCTCGCTTCAATGTAATACTTGCAACTGCAATCATGGACATGTATGCAAAATGTGGCAAGTTGGTGACTGCACGGAATATGTTTGACAAGATGCCTCAAAGAAACTTGGTTGTTTGGAATTCAATGGTTAGTGCTTACAGTCAATATGGTCGAGGAGCAGAGGCTTTGCGTCTTTTCGTTGACATGGAACTGGCTGGGTTTGTTCCTAATAAAGCAACGTTTTTTAATAATAAAGTTGAAGAGAGCTTGAGCTCTCGGACCTATACTAAATTCTCCGGTAGCTGGAGATGCAAATTCTGA

Protein sequence

MECGRLDFLNCRVCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMELAGFVPNKATFFNNKVEESLSSRTYTKFSGSWRCKF

Homology

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BLAST of MELO3C031545 vs. NCBI nr
Match: XP_016901472.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g05240 [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 2.1e-80
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MECGRLDFLNCRVCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLV 60
           MECGRLDFLNCRVCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLV
Sbjct: 1   MECGRLDFLNCRVCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLV 60

Query: 61  RNRLRQLGFDPFDTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSA 120
           RNRLRQLGFDPFDTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSA
Sbjct: 61  RNRLRQLGFDPFDTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSA 120

Query: 121 YSQYGRGAEALRLFVDMELAGFVPNKATFFN 152
           YSQYGRGAEALRLFVDMELAGFVPNKATFF+
Sbjct: 121 YSQYGRGAEALRLFVDMELAGFVPNKATFFS 151

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BLAST of MELO3C031545 vs. NCBI nr
Match: KAA0047950.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 264.6 bits (675), Expect = 5.9e-67
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 13  VCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPF 72
           VCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPF
Sbjct: 93  VCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPF 152

Query: 73  DTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALR 132
           DTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALR
Sbjct: 153 DTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALR 212

Query: 133 LFVDMELAGFVPNKATFFNNKV 155
           LFVDMELAG +  +A   ++++
Sbjct: 213 LFVDMELAGRMEEEAEVASDQI 234

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BLAST of MELO3C031545 vs. NCBI nr
Match: TYK18325.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 251.5 bits (641), Expect = 5.2e-63
Identity = 128/163 (78.53%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 20  QRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFN 79
           + + ++ +DMENEGVEPNEITMTTALAAAAHCRDI TGKLVRNRLRQLGFDPFDTNSRFN
Sbjct: 106 KEALRLFKDMENEGVEPNEITMTTALAAAAHCRDIYTGKLVRNRLRQLGFDPFDTNSRFN 165

Query: 80  VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 139
           VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL
Sbjct: 166 VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 225

Query: 140 AGFVPNKATFFN--------NKVEE--SLSSRTYTKFSGSWRC 173
           AGFVPNKATFF+         ++EE   ++S   T  +  W C
Sbjct: 226 AGFVPNKATFFSVIRAYTHLGRMEEEAEVASDQITYIAVLWAC 268

[Close]

BLAST of MELO3C031545 vs. NCBI nr
Match: XP_004139361.1 (putative pentatricopeptide repeat-containing protein At3g05240 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.7e-58
Identity = 114/132 (86.36%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 20  QRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFN 79
           + + ++ +DMENEGVEPNEITMTTALAAAA CRDI TGKLV +RLRQLGFDPFDTNS FN
Sbjct: 188 KEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPFDTNSCFN 247

Query: 80  VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 139
           VILATAIMDMYAKCGKLVTARN+FDKMPQRNLVVWNSM+SAYSQYGRGAEALRLFVDME+
Sbjct: 248 VILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDMEM 307

Query: 140 AGFVPNKATFFN 152
           AGFVPNKATF +
Sbjct: 308 AGFVPNKATFLS 319

[Close]

BLAST of MELO3C031545 vs. NCBI nr
Match: XP_008454853.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g05240 [Cucumis melo] >AAO45757.1 selenium binding protein-like protein [Cucumis melo subsp. melo] >KAA0047953.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 6.6e-58
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 20  QRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFN 79
           + + ++ +DMENEGVEPNEITMTTALAAAA CRDI TGKLVR RLRQLG DPF TNSRFN
Sbjct: 188 KEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLRQLGLDPFHTNSRFN 247

Query: 80  VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 139
           VILATAIMDMYAKCGKLVTARN+FDKMPQRNLVVWNSM+SA+SQYGRGAEALRLFVDMEL
Sbjct: 248 VILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYGRGAEALRLFVDMEL 307

Query: 140 AGFVPNKATFFN 152
           AGFVPNKATF +
Sbjct: 308 AGFVPNKATFLS 319

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BLAST of MELO3C031545 vs. ExPASy Swiss-Prot
Match: Q9MA95 (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29
Identity = 64/126 (50.79%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 27  QDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDP-FDTNSRFNVILATA 86
           ++M++ GV+ NE  M   L A   C+DI TGK     L+ LGFDP F +   FNVILAT+
Sbjct: 197 REMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATS 256

Query: 87  IMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMELAGFVPN 146
           ++DMYAKCG L TAR +FD MP+R LV WNS+++ YSQ G   EAL +F+DM   G  P+
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316

Query: 147 KATFFN 152
           K TF +
Sbjct: 317 KVTFLS 322

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BLAST of MELO3C031545 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 44/128 (34.38%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 22  SFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFNVI 81
           +  + ++M+     PN +T+T  L+A A    +  GK V + +R   F+        ++ 
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES-------SIY 463

Query: 82  LATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMELAG 141
           ++TA++ MYAKCG +  AR +FD M ++N V WN+M+S Y  +G+G EAL +F +M  +G
Sbjct: 464 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 523

Query: 142 FVPNKATF 150
             P   TF
Sbjct: 524 ITPTPVTF 524

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BLAST of MELO3C031545 vs. ExPASy Swiss-Prot
Match: O64705 (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E23 PE=3 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 45/132 (34.09%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 19  AQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNR--LRQLGFDPFDTNS 78
           A+ +  + + ME EG EP+E T+ + L A +H  D+ TG+L+      +++G   F    
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF---- 273

Query: 79  RFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVD 138
                L + ++ MY KCG L +AR +F++M +++ V W +M++ YSQ G+ +EA +LF +
Sbjct: 274 -----LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 333

Query: 139 MELAGFVPNKAT 149
           ME  G  P+  T
Sbjct: 334 MEKTGVSPDAGT 336

[Close]

BLAST of MELO3C031545 vs. ExPASy Swiss-Prot
Match: Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-17
Identity = 45/135 (33.33%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 15  EQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDT 74
           +Q   + +  + Q M  E ++ + +T+ T ++AAA   ++  GK V+    +  F+    
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES--- 411

Query: 75  NSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLF 134
               +++LA+ +MDMYAKCG +V A+ +FD   +++L++WN++++AY++ G   EALRLF
Sbjct: 412 ----DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 471

Query: 135 VDMELAGFVPNKATF 150
             M+L G  PN  T+
Sbjct: 472 YGMQLEGVPPNVITW 479

[Close]

BLAST of MELO3C031545 vs. ExPASy Swiss-Prot
Match: Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-17
Identity = 44/122 (36.07%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 29  MENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFNVILATAIMD 88
           M+ +GV P   T+ + L+  A    +  GK V  +L +  FD        +V +A+ +M 
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD-------VDVYVASVLMT 381

Query: 89  MYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMELAGFV-PNKA 148
           MY KCG+LV ++ +FD+ P +++++WNS++S Y+ +G G EAL++F +M L+G   PN+ 
Sbjct: 382 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 436

Query: 149 TF 150
           TF
Sbjct: 442 TF 436

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BLAST of MELO3C031545 vs. ExPASy TrEMBL
Match: A0A1S4DZQ0 (putative pentatricopeptide repeat-containing protein At3g05240 OS=Cucumis melo OX=3656 GN=LOC107991267 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MECGRLDFLNCRVCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLV 60
           MECGRLDFLNCRVCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLV
Sbjct: 1   MECGRLDFLNCRVCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLV 60

Query: 61  RNRLRQLGFDPFDTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSA 120
           RNRLRQLGFDPFDTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSA
Sbjct: 61  RNRLRQLGFDPFDTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSA 120

Query: 121 YSQYGRGAEALRLFVDMELAGFVPNKATFFN 152
           YSQYGRGAEALRLFVDMELAGFVPNKATFF+
Sbjct: 121 YSQYGRGAEALRLFVDMELAGFVPNKATFFS 151

[Close]

BLAST of MELO3C031545 vs. ExPASy TrEMBL
Match: A0A5A7TXN3 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00100 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67
Identity = 130/142 (91.55%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 13  VCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPF 72
           VCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPF
Sbjct: 93  VCEQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPF 152

Query: 73  DTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALR 132
           DTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALR
Sbjct: 153 DTNSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALR 212

Query: 133 LFVDMELAGFVPNKATFFNNKV 155
           LFVDMELAG +  +A   ++++
Sbjct: 213 LFVDMELAGRMEEEAEVASDQI 234

[Close]

BLAST of MELO3C031545 vs. ExPASy TrEMBL
Match: A0A5D3D457 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00360 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.5e-63
Identity = 128/163 (78.53%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 20  QRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFN 79
           + + ++ +DMENEGVEPNEITMTTALAAAAHCRDI TGKLVRNRLRQLGFDPFDTNSRFN
Sbjct: 106 KEALRLFKDMENEGVEPNEITMTTALAAAAHCRDIYTGKLVRNRLRQLGFDPFDTNSRFN 165

Query: 80  VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 139
           VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL
Sbjct: 166 VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 225

Query: 140 AGFVPNKATFFN--------NKVEE--SLSSRTYTKFSGSWRC 173
           AGFVPNKATFF+         ++EE   ++S   T  +  W C
Sbjct: 226 AGFVPNKATFFSVIRAYTHLGRMEEEAEVASDQITYIAVLWAC 268

[Close]

BLAST of MELO3C031545 vs. ExPASy TrEMBL
Match: A0A0A0LIL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021600 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.4e-59
Identity = 114/132 (86.36%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 20  QRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFN 79
           + + ++ +DMENEGVEPNEITMTTALAAAA CRDI TGKLV +RLRQLGFDPFDTNS FN
Sbjct: 188 KEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPFDTNSCFN 247

Query: 80  VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 139
           VILATAIMDMYAKCGKLVTARN+FDKMPQRNLVVWNSM+SAYSQYGRGAEALRLFVDME+
Sbjct: 248 VILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDMEM 307

Query: 140 AGFVPNKATFFN 152
           AGFVPNKATF +
Sbjct: 308 AGFVPNKATFLS 319

[Close]

BLAST of MELO3C031545 vs. ExPASy TrEMBL
Match: A0A5A7TWI8 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00130 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.2e-58
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 20  QRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFN 79
           + + ++ +DMENEGVEPNEITMTTALAAAA CRDI TGKLVR RLRQLG DPF TNSRFN
Sbjct: 188 KEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLRQLGLDPFHTNSRFN 247

Query: 80  VILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMEL 139
           VILATAIMDMYAKCGKLVTARN+FDKMPQRNLVVWNSM+SA+SQYGRGAEALRLFVDMEL
Sbjct: 248 VILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYGRGAEALRLFVDMEL 307

Query: 140 AGFVPNKATFFN 152
           AGFVPNKATF +
Sbjct: 308 AGFVPNKATFLS 319

[Close]

BLAST of MELO3C031545 vs. TAIR 10
Match: AT3G05240.1 (mitochondrial editing factor 19 )

HSP 1 Score: 129.0 bits (323), Expect = 3.6e-30
Identity = 64/126 (50.79%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 27  QDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDP-FDTNSRFNVILATA 86
           ++M++ GV+ NE  M   L A   C+DI TGK     L+ LGFDP F +   FNVILAT+
Sbjct: 197 REMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATS 256

Query: 87  IMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMELAGFVPN 146
           ++DMYAKCG L TAR +FD MP+R LV WNS+++ YSQ G   EAL +F+DM   G  P+
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316

Query: 147 KATFFN 152
           K TF +
Sbjct: 317 KVTFLS 322

[Close]

BLAST of MELO3C031545 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 7.6e-20
Identity = 44/128 (34.38%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 22  SFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFNVI 81
           +  + ++M+     PN +T+T  L+A A    +  GK V + +R   F+        ++ 
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES-------SIY 463

Query: 82  LATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMELAG 141
           ++TA++ MYAKCG +  AR +FD M ++N V WN+M+S Y  +G+G EAL +F +M  +G
Sbjct: 464 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 523

Query: 142 FVPNKATF 150
             P   TF
Sbjct: 524 ITPTPVTF 524

[Close]

BLAST of MELO3C031545 vs. TAIR 10
Match: AT2G34400.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 8.4e-19
Identity = 45/132 (34.09%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 19  AQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNR--LRQLGFDPFDTNS 78
           A+ +  + + ME EG EP+E T+ + L A +H  D+ TG+L+      +++G   F    
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF---- 273

Query: 79  RFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVD 138
                L + ++ MY KCG L +AR +F++M +++ V W +M++ YSQ G+ +EA +LF +
Sbjct: 274 -----LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 333

Query: 139 MELAGFVPNKAT 149
           ME  G  P+  T
Sbjct: 334 MEKTGVSPDAGT 336

[Close]

BLAST of MELO3C031545 vs. TAIR 10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.2e-18
Identity = 44/122 (36.07%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 29  MENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDTNSRFNVILATAIMD 88
           M+ +GV P   T+ + L+  A    +  GK V  +L +  FD        +V +A+ +M 
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD-------VDVYVASVLMT 381

Query: 89  MYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLFVDMELAGFV-PNKA 148
           MY KCG+LV ++ +FD+ P +++++WNS++S Y+ +G G EAL++F +M L+G   PN+ 
Sbjct: 382 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 436

Query: 149 TF 150
           TF
Sbjct: 442 TF 436

[Close]

BLAST of MELO3C031545 vs. TAIR 10
Match: AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.2e-18
Identity = 45/135 (33.33%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 15  EQRSAQRSFKIVQDMENEGVEPNEITMTTALAAAAHCRDICTGKLVRNRLRQLGFDPFDT 74
           +Q   + +  + Q M  E ++ + +T+ T ++AAA   ++  GK V+    +  F+    
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES--- 411

Query: 75  NSRFNVILATAIMDMYAKCGKLVTARNMFDKMPQRNLVVWNSMVSAYSQYGRGAEALRLF 134
               +++LA+ +MDMYAKCG +V A+ +FD   +++L++WN++++AY++ G   EALRLF
Sbjct: 412 ----DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 471

Query: 135 VDMELAGFVPNKATF 150
             M+L G  PN  T+
Sbjct: 472 YGMQLEGVPPNVITW 479

The following BLAST results are available for this feature:

BLAST of MELO3C031545 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901472.1	2.1e-80	99.34	PREDICTED: putative pentatricopeptide repeat-containing protein At3g05240 [Cucum...	[more]
KAA0047950.1	5.9e-67	91.55	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
TYK18325.1	5.2e-63	78.53	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_004139361.1	1.7e-58	86.36	putative pentatricopeptide repeat-containing protein At3g05240 [Cucumis sativus]	[more]
XP_008454853.1	6.6e-58	86.36	PREDICTED: putative pentatricopeptide repeat-containing protein At3g05240 [Cucum...	[more]

BLAST of MELO3C031545 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA95	5.1e-29	50.79	Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th...	[more]
Q9SUH6	1.1e-18	34.38	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
O64705	1.2e-17	34.09	Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX...	[more]
Q9FM64	4.5e-17	33.33	Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop...	[more]
Q56XI1	4.5e-17	36.07	Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop...	[more]

BLAST of MELO3C031545 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZQ0	1.0e-80	99.34	putative pentatricopeptide repeat-containing protein At3g05240 OS=Cucumis melo O...	[more]
A0A5A7TXN3	2.9e-67	91.55	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A5D3D457	2.5e-63	78.53	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A0A0LIL6	8.4e-59	86.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021600 PE=4 SV=1	[more]
A0A5A7TWI8	3.2e-58	86.36	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]

BLAST of MELO3C031545 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05240.1	3.6e-30	50.79	mitochondrial editing factor 19	[more]
AT4G30700.1	7.6e-20	34.38	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G34400.1	8.4e-19	34.09	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G09410.1	3.2e-18	36.07	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G55740.1	3.2e-18	33.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 110..149 e-value: 6.9E-8 score: 32.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 112..145 e-value: 4.2E-8 score: 30.9 coord: 84..112 e-value: 0.0011 score: 17.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 110..144 score: 11.893068
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 9..72 e-value: 2.2E-5 score: 26.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 73..165 e-value: 1.8E-20 score: 75.0
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 17..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031545.1	MELO3C031545.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding