MELO3C031528 (gene) Melon (DHL92) v4

Overview
NameMELO3C031528
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr05: 24761564 .. 24763426 (-)
RNA-Seq ExpressionMELO3C031528
SyntenyMELO3C031528
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGATGACAAAAGACCTGATTATATACCCCGTATGTACGATCCCATCTCTAGAGGCTTGGCCTTCTTGTTCATATCTCTAGATTTGAAGGCTTTTATGTAAGTAGTAGTTGGGTGGGGTGGCGCTCTCTTCCCCCTCCTAAGGTTGTTATTTGATTTGTGTCGATTCATCTTGTATGTTTCTTTTTAGAAAAAAAAAAAAAACTCATTGTATACATACTTATATATTGGCAATCTAATTATATAGGGACATCTGGGACGAGAAGTGAGGTGGTTTAGTCTGAGAGTTGCGAAGTTTGGAAAGTTGCTTAGCCATTGGCCCGTGGTAAGGAGTTCATAAGACTTGAAAATGATCCATTTTTTAGATGTGGGGTCCAAATTTCTTGAGCCAAGCGAGGGTGGAGTTGGCTTCACTCTCTCAACTCCAACTCATTGAGCCAAACACTTCTATAGTTAGTTAGTTGTAAGGAATTTGTGAAGAGGACATGTAATCCCACATTGATCAAAAAGTTTGGAAGATCCTCAAATACAGGTACATCTCTATTAACTCAAGTCCAAGGTCTTTTAGATAAGAGTTTATTCTCAAAGTTACTTTGACACAACATAACACGCCAGCGTCATTGTAGAAATATAGAGAAGTTGCGAACTAGAAAAGGATACCTTTGCCTCTATAGCGTTTGTTTTTCAGCTTCTCACTCGTACAAAGTGGTAGGTAGACTCTATAAATTCACCAACTGAATTCTTTCTTTGGTCAATTTAACTTAAGTTGGTTTTCTTTCCACTGGCACCATCGAAGTAATGATTCTTTGGGTCTTGTTTCCTGCCTTTGCCGACAGGGACAGAATTGGTTTTAGCAAGAAGTTTTTAGCTAAACGGCAGCTTCGCTACTTCTCAGGGTTCAATAGTGCAACCTTCATGAGTGCTCTTTAATTTTAATGTTATCTACTATGACAGATCTAATTACTTTACCAATTAAAAATCTTGTACAGCAAATCTAACTAATTCTTGTAAGAAAAATCATATCTATAAGCAGTTAACAACGACACTGGAGTCCAGTCAAATGAGAACTCCAAAGATAAACTAACAACAAAGAGTTATCGAAGTGGTTTCGTTATGGTAGGGATACCACTTCCCTTTGTTTCTGATATATATTTAGTATTTTGAACTGACACAAGCGAGTTAAAGTTTCAATAGTTTTAGCTGGGCATTTTTCACTTACCTCAAACTGAGAGCTGAAAGAAAAAAGTTTCCTTTGTTCATCAGTTGGATTCAACAACCATTGGCAGAAAATCGCTGCTGCTCCAACAACAGATAGAAGTGACAGCATCGCTAGGAATCCGAAATGTGAAGTATCGTTGGCAATTATTGCAACTCCCAACATTATAGACTCTGCTAAACTAGCTACTGAGACCTCTGTTGATGCAATGAGGTTCGTTTTGGATGATGGTATACCAGTTTGAAGAATCTGTTGCCCTACAACATTATATGACATGTGTCCGAGCCTAGATAAAACCTGCATATCGGACAATCATTTAGGAAAACAAAAGATGAAAAGATTATCTGATGCATCAAATTTTTAGCTAAGAGCAATATTCGTTAACATCCTACAAACAAGATGAGTCAAATTCTCCCTTGTCTATGAATAACATTAACCTAAATTGCAGATGGTGAAATTTTGAACATAAACAAGCTAATTTATGGACCACAATTATCGAAAATCAGATTAGCTTGCCCACTGGAACTGATTCTGTGTAGGAGTTTGATTCTTACGATCATAGCTAAGAAGAAAAGAAGAGGACTCTGCCGGGAAAGAGACCCGCTCAAGTACACAGCAACAGCAACTGTCAAAAGTGCAGCCTGA

mRNA sequence

ATGGTTGATGACAAAAGACCTGATTATATACCCCGTATGTACGATCCCATCTCTAGAGGCTTGGCCTTCTTGTTCATATCTCTAGATTTGAAGGCTTTTATGTAAGTAGTAGTTGGGTGGGGTGGCGCTCTCTTCCCCCTCCTAAGGGACATCTGGGACGAGAAGTGAGGTGGTTTAGTCTGAGAGTTGCGAAGTTTGGAAAGTTGCTTAGCCATTGGCCCGTGATGTGGGGTCCAAATTTCTTGAGCCAAGCGAGGGTGGAGTTGGCTTCACTCTCTCAACTCCAACTCATTGAGCCAAACACTTCTATAGTTAGTTAGTTGTAAGGAATTTGTGAAGAGGACATGTAATCCCACATTGATCAAAAAGTTTGGAAGATCCTCAAATACAGTTGGTTTTCTTTCCACTGGCACCATCGAAGTAATGATTCTTTGGGTCTTGTTTCCTGCCTTTGCCGACAGGGACAGAATTGGTTTTAGCAAGAAGTTTTTAGCTAAACGGCAGCTTCGCTACTTCTCAGGGTTCAATATTAACAACGACACTGGAGTCCAGTCAAATGAGAACTCCAAAGATAAACTAACAACAAAGAGTTATCGAAGTGTTGGATTCAACAACCATTGGCAGAAAATCGCTGCTGCTCCAACAACAGATAGAAGTGACAGCATCGCTAGGAATCCGAAATGTGAAGTATCGTTGGCAATTATTGCAACTCCCAACATTATAGACTCTGCTAAACTAGCTACTGAGACCTCTGTTGATGCAATGAGGTTCGTTTTGGATGATGATGGTGAAATTTTGAACATAAACAAGCTAATTTATGGACCACAATTATCGAAAATCAGATTAGCTTGCCCACTGGAACTGATTCTGTGTAGGAGTTTGATTCTTACGATCATAGCTAAGAAGAAAAGAAGAGGACTCTGCCGGGAAAGAGACCCGCTCAAGTACACAGCAACAGCAACTGTCAAAAGTGCAGCCTGA

Coding sequence (CDS)

ATGATTCTTTGGGTCTTGTTTCCTGCCTTTGCCGACAGGGACAGAATTGGTTTTAGCAAGAAGTTTTTAGCTAAACGGCAGCTTCGCTACTTCTCAGGGTTCAATATTAACAACGACACTGGAGTCCAGTCAAATGAGAACTCCAAAGATAAACTAACAACAAAGAGTTATCGAAGTGTTGGATTCAACAACCATTGGCAGAAAATCGCTGCTGCTCCAACAACAGATAGAAGTGACAGCATCGCTAGGAATCCGAAATGTGAAGTATCGTTGGCAATTATTGCAACTCCCAACATTATAGACTCTGCTAAACTAGCTACTGAGACCTCTGTTGATGCAATGAGGTTCGTTTTGGATGATGATGGTGAAATTTTGAACATAAACAAGCTAATTTATGGACCACAATTATCGAAAATCAGATTAGCTTGCCCACTGGAACTGATTCTGTGTAGGAGTTTGATTCTTACGATCATAGCTAAGAAGAAAAGAAGAGGACTCTGCCGGGAAAGAGACCCGCTCAAGTACACAGCAACAGCAACTGTCAAAAGTGCAGCCTGA

Protein sequence

MILWVLFPAFADRDRIGFSKKFLAKRQLRYFSGFNINNDTGVQSNENSKDKLTTKSYRSVGFNNHWQKIAAAPTTDRSDSIARNPKCEVSLAIIATPNIIDSAKLATETSVDAMRFVLDDDGEILNINKLIYGPQLSKIRLACPLELILCRSLILTIIAKKKRRGLCRERDPLKYTATATVKSAA
Homology
[Close]
BLAST of MELO3C031528 vs. NCBI nr
Match: PPS16478.1 (hypothetical protein GOBAR_AA04103 [Gossypium barbadense])

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-11
Identity = 54/110 (49.09%), Postives = 64/110 (58.18%), Query Frame = 0 

Query: 23  LAKRQLRYFSGFNINNDTGVQSNENSKDKLTTKSYRSVG---FNNHWQKIAAAPTTDRSD 82
           LA+  LR     N++ + GV+  E     L  +   +V    FNNH Q I  APTTD +D
Sbjct: 190 LARPILRQEWHENLSFEDGVRLLEKCMRVLLYRDRSAVNKLQFNNHRQNIHEAPTTDNND 249

Query: 83  SIARNPKCEVSLAIIATPNIIDSAKLATETSVDAMRFVLDDDGEILNINK 130
           S ARNPK E S AIIA PNI DSAKLATE SV  +RF LDD   I  I +
Sbjct: 250 SNARNPKWETSFAIIAIPNIRDSAKLATEISVVPIRFALDDGIPIAKITE 299

[Close]
BLAST of MELO3C031528 vs. ExPASy TrEMBL
Match: A0A2P5YLQ7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA04103 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 54/110 (49.09%), Postives = 64/110 (58.18%), Query Frame = 0 

Query: 23  LAKRQLRYFSGFNINNDTGVQSNENSKDKLTTKSYRSVG---FNNHWQKIAAAPTTDRSD 82
           LA+  LR     N++ + GV+  E     L  +   +V    FNNH Q I  APTTD +D
Sbjct: 190 LARPILRQEWHENLSFEDGVRLLEKCMRVLLYRDRSAVNKLQFNNHRQNIHEAPTTDNND 249

Query: 83  SIARNPKCEVSLAIIATPNIIDSAKLATETSVDAMRFVLDDDGEILNINK 130
           S ARNPK E S AIIA PNI DSAKLATE SV  +RF LDD   I  I +
Sbjct: 250 SNARNPKWETSFAIIAIPNIRDSAKLATEISVVPIRFALDDGIPIAKITE 299

The following BLAST results are available for this feature:
BLAST of MELO3C031528 vs. NCBI nr
Match NameE-valueIdentityDescription
PPS16478.13.8e-1149.09hypothetical protein GOBAR_AA04103 [Gossypium barbadense][more]
BLAST of MELO3C031528 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031528 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5YLQ71.8e-1149.09Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA04103 PE=4 SV... [more]
BLAST of MELO3C031528 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031528.1MELO3C031528.1mRNA