MELO3C031524.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031524.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr05: 25259605 .. 25261797 (+)
RNA-Seq ExpressionMELO3C031524.jh1
SyntenyMELO3C031524.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCGCGACCGCAGCCATTGCAATGAGGATTCTCAATTCCCTCTTCCTCTTGACCAATGGGCTATCTGGTGTTGGTGGTCTACAGGAAGCCTCTCCTCTTGGTGCTGCTCATTCAGCCTTGACCATATCGGCATAGTCTTTCTGATTGAAGCAATAAATTGCCTGCACGAATGCCTGCCTGACCTGGCTTCAACCGATTCTGCAGGCCTCGAGAGCAGTTTTCGTTACTGGATCGTCAGTGCTGGCTTGAAGTTCAACAATGAACTGATAAGTTCTGGAAGTGTTTCTCAGCACTTGGTTATTTGCTATCAAGACCAAGCCAACGTCATCTGCTGGACCTTTCAGATTTTCATTGGAGGTTTTGTTGCAAAACCCATAATCCTCATTTTGATAGCATATTCGATCGATCCACTGCTGTGTTTCCGGGTTACCCAAAGCTGGGTGAACAACGAGGAGAATGAGGAAGAGGGTTTGCAGTTGTGAAGAATATGAGAAAGCCATTGTTACTTGGGGAGCTAATGTTTGGAATTCTGACAAAAGCAGAATAAGGTGAGAGTGGCTTTTATAGGATACTTTGTGCTGCTATTGTTTGCACAATCTTGGCATGCTTTCTTAAAAATTTTCCCTTGATTTTCTGGTTCATGATTTCAGTTCAAATAACTCAAATTAAAGTAAAAAGGAAGATATACATTCATTGCTGGTTTATACAAGTTATAGTAGATCTTTTTGCATATCGTTTTGGAAATTATAAGTTGAGAGAAGCAAATCTGATCTGCATGCTATAGTGGTACATCCAAGAATTTAAATTCCTCCCTTGTATGTTATACTCCTTTTCTAAACTTCCATGATTCACATTTCTTTTCCGTATATTTACAAAATTTTCCAATTTATTTCTTTTATCATTTACTTTTCTTACTCTAGGGATAAATCAACACATTATGTAGAAGAAAGATTCAACTAACAAACTTATTTAGTTCTTGTTCATCAGGCAAAATCAAACAAAACAATAAGAACAACTGAACAAGAAGGGTAGAGAGAGAGAGAGAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAACATGTTCATTGTTTCATTACTTCTTGCTTTTATAAAAAATTTACTGAATGTGACCATTAGCTGCAGCACATTGATTTACGCTTATTGAAATATCACAACATAGGATCATAAGTTTGTTCATGACTTCAATATGCAATGAATTGATTTTAATGGCTTGACTACACCTTAGAACAAGTCTCTTTGATGCCACCAATGGACCATTCTCTCTGAAGATCTTCTGCTGTGAGAACTGATAAGCTTTTTGGATATTTGATTGAATTTCATGGTAATACTCCACACAATGCTCAAAACTTTTCTTCACCTCAGGATCACTCTCATTCTTACTTAGTTTGTAGAAGGTATCAAGGTTTTGATCTGCTTGTTTTTTTGCTAGATTGCTGCATATAAGTGAGAGCTTAGGGAGGTCGGCCGAGACGGTACGGGAATCATTATTAAGGATTTTCTCACAGAGTGACGGATTGGAGGTTTTAGAGCAAATGGTGACCAGATTTTCATGGGGGATTCCATGAGAAGGGAAAATGGTCAGGGAAAAAGTTGCCAAAAGAAGAGCTGGGATGAAAGAGGTAAGATTTAGACAGCAATTCATTGTTGGTTTCTTAAAAGAACAGATTATATGAGCAGTGGCTTTCTTTGGAAACTTAGAAGAAGCTGTTTAAATAATGAGTTTGGGAGAAAAAGTAACTTCAAAAGTAACTGATTGTGCTTTGTAGGATGCCACTTTCTTTTCTTCAAGTACATTACAGGGAAAAAGTTAAGGATCCTTCTTGGAAAAACAGCCACATGGGCTACATGCAAGTTAAACTCTTGAGAAACAACAATGGGAAGAGCTGTACATCTCCTTCATTTTAGATATGACTAGACTAGAATCTTACCTGCTTTACGACCTTACTTCAACAAGTCAGTTCTCTAGGTTGTACAATTGTGTTATTGAGTTCAAAGAACGTTTTCTACTTGTTCACCTTTTACATTTCCTATTAACCCAATACAATTTGTTAGACTGTGGAAACTTCTTTTAAAGGTTAGAGGTTTGAGATCTTTAAGAAAATAACATAATTTTTCATCTTTGGCTGATTTATAAGTCTGGTTGGTTTGGCCAAATGTGTTTTTGCTTCAC

mRNA sequence

ATGACCCGCGACCGCAGCCATTGCAATGAGGATTCTCAATTCCCTCTTCCTCTTGACCAATGGGCTATCTGGTGTTGGTGGTCTACAGGAAGCCTCTCCTCTTGGTGCTGCTCATTCAGCCTTGACCATATCGGCATAGTCTTTCTGATTGAAGCAATAAATTGCCTGCACGAATGCCTGCCTGACCTGGCTTCAACCGATTCTGCAGGCCTCGAGAGCAGTTTTCGTTACTGGATCGTCAGTGCTGGCTTGAAGTTCAACAATGAACTGATAAGTTCTGGAAGTGTTTCTCAGCACTTGGTTATTTGCTATCAAGACCAAGCCAACGTCATCTGCTGGACCTTTCAGATTTTCATTGGAGGTTTTGTTGCAAAACCCATAATCCTCATTTTGATAGCATATTCGATCGATCCACTGCTGTGTTTCCGGGTTACCCAAAGCTGGGTGAACAACGAGGAGAATGAGGAAGAGGGTTTGCAGTTGTGAAGAATATGAGAAAGCCATTGTTACTTGGGGAGCTAATGTTTGGAATTCTGACAAAAGCAGAATAAGATTGCTGCATATAAGTGAGAGCTTAGGGAGGTCGGCCGAGACGGTACGGGAATCATTATTAAGGATTTTCTCACAGAGTGACGGATTGGAGGTTTTAGAGCAAATGGTGACCAGATTTTCATGGGGGATTCCATGAGAAGGGAAAATGGTCAGGGAAAAAGTTGCCAAAAGAAGAGCTGGGATGAAAGAGGATGCCACTTTCTTTTCTTCAAGTACATTACAGGGAAAAAGTTAAGGATCCTTCTTGGAAAAACAGCCACATGGGCTACATGCAAGTTAAACTCTTGAGAAACAACAATGGGAAGAGCTGTACATCTCCTTCATTTTAGATATGACTAGACTAGAATCTTACCTGCTTTACGACCTTACTTCAACAAGTCAGTTCTCTAGGTTGTACAATTGTGTTATTGAGTTCAAAGAACGTTTTCTACTTGTTCACCTTTTACATTTCCTATTAACCCAATACAATTTGTTAGACTGTGGAAACTTCTTTTAAAGGTTAGAGGTTTGAGATCTTTAAGAAAATAACATAATTTTTCATCTTTGGCTGATTTATAAGTCTGGTTGGTTTGGCCAAATGTGTTTTTGCTTCAC

Coding sequence (CDS)

ATGACCCGCGACCGCAGCCATTGCAATGAGGATTCTCAATTCCCTCTTCCTCTTGACCAATGGGCTATCTGGTGTTGGTGGTCTACAGGAAGCCTCTCCTCTTGGTGCTGCTCATTCAGCCTTGACCATATCGGCATAGTCTTTCTGATTGAAGCAATAAATTGCCTGCACGAATGCCTGCCTGACCTGGCTTCAACCGATTCTGCAGGCCTCGAGAGCAGTTTTCGTTACTGGATCGTCAGTGCTGGCTTGAAGTTCAACAATGAACTGATAAGTTCTGGAAGTGTTTCTCAGCACTTGGTTATTTGCTATCAAGACCAAGCCAACGTCATCTGCTGGACCTTTCAGATTTTCATTGGAGGTTTTGTTGCAAAACCCATAATCCTCATTTTGATAGCATATTCGATCGATCCACTGCTGTGTTTCCGGGTTACCCAAAGCTGGGTGAACAACGAGGAGAATGAGGAAGAGGGTTTGCAGTTGTGA

Protein sequence

MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECLPDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFIGGFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL
Homology
[Close]
BLAST of MELO3C031524.jh1 vs. NCBI nr
Match: KAA0048112.1 (hypothetical protein E6C27_scaffold385G001910 [Cucumis melo var. makuwa])

HSP 1 Score: 342 bits (876), Expect = 9.98e-119
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL 60
           MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL
Sbjct: 1   MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL 60

Query: 61  PDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFIG 120
           PDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFIG
Sbjct: 61  PDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFIG 120

Query: 121 GFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 161
           GFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL
Sbjct: 121 GFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 161

[Close]
BLAST of MELO3C031524.jh1 vs. NCBI nr
Match: TYJ96440.1 (hypothetical protein E5676_scaffold546G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 337 bits (864), Expect = 7.00e-117
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0 

Query: 1   MTRDRSHCNEDSQFPLPLDQWAIWC-WWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHEC 60
           MTRDRSHCNEDSQFPLPLDQWAIWC WWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHEC
Sbjct: 1   MTRDRSHCNEDSQFPLPLDQWAIWCCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHEC 60

Query: 61  LPDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFI 120
           LPDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFI
Sbjct: 61  LPDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFI 120

Query: 121 GGFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 161
           GGFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL
Sbjct: 121 GGFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 162

[Close]
BLAST of MELO3C031524.jh1 vs. NCBI nr
Match: KGN61018.1 (hypothetical protein Csa_021204 [Cucumis sativus])

HSP 1 Score: 176 bits (446), Expect = 8.94e-54
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0 

Query: 1  MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL 60
          MT DR HCNEDSQ PLPLDQWAIWCWWSTGSL SWCCSFSLDHIGIVFLIE  NCLH+CL
Sbjct: 1  MTCDRIHCNEDSQVPLPLDQWAIWCWWSTGSLFSWCCSFSLDHIGIVFLIEVRNCLHQCL 60

Query: 61 PDLASTDSAGLESSFRYWIVSAGLKFNNEL 90
          PDLASTDSA LESSFRY I+SAGLKFNNEL
Sbjct: 61 PDLASTDSASLESSFRYCIISAGLKFNNEL 90

[Close]
BLAST of MELO3C031524.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TX74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001910 PE=4 SV=1)

HSP 1 Score: 342 bits (876), Expect = 4.83e-119
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL 60
           MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL
Sbjct: 1   MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL 60

Query: 61  PDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFIG 120
           PDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFIG
Sbjct: 61  PDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFIG 120

Query: 121 GFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 161
           GFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL
Sbjct: 121 GFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 161

[Close]
BLAST of MELO3C031524.jh1 vs. ExPASy TrEMBL
Match: A0A5D3B998 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00740 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 3.39e-117
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0 

Query: 1   MTRDRSHCNEDSQFPLPLDQWAIWC-WWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHEC 60
           MTRDRSHCNEDSQFPLPLDQWAIWC WWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHEC
Sbjct: 1   MTRDRSHCNEDSQFPLPLDQWAIWCCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHEC 60

Query: 61  LPDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFI 120
           LPDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFI
Sbjct: 61  LPDLASTDSAGLESSFRYWIVSAGLKFNNELISSGSVSQHLVICYQDQANVICWTFQIFI 120

Query: 121 GGFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 161
           GGFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL
Sbjct: 121 GGFVAKPIILILIAYSIDPLLCFRVTQSWVNNEENEEEGLQL 162

[Close]
BLAST of MELO3C031524.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LH07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034710 PE=4 SV=1)

HSP 1 Score: 176 bits (446), Expect = 4.33e-54
Identity = 80/90 (88.89%), Postives = 82/90 (91.11%), Query Frame = 0 

Query: 1  MTRDRSHCNEDSQFPLPLDQWAIWCWWSTGSLSSWCCSFSLDHIGIVFLIEAINCLHECL 60
          MT DR HCNEDSQ PLPLDQWAIWCWWSTGSL SWCCSFSLDHIGIVFLIE  NCLH+CL
Sbjct: 1  MTCDRIHCNEDSQVPLPLDQWAIWCWWSTGSLFSWCCSFSLDHIGIVFLIEVRNCLHQCL 60

Query: 61 PDLASTDSAGLESSFRYWIVSAGLKFNNEL 90
          PDLASTDSA LESSFRY I+SAGLKFNNEL
Sbjct: 61 PDLASTDSASLESSFRYCIISAGLKFNNEL 90

The following BLAST results are available for this feature:
BLAST of MELO3C031524.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048112.19.98e-119100.00hypothetical protein E6C27_scaffold385G001910 [Cucumis melo var. makuwa][more]
TYJ96440.17.00e-11799.38hypothetical protein E5676_scaffold546G00740 [Cucumis melo var. makuwa][more]
KGN61018.18.94e-5488.89hypothetical protein Csa_021204 [Cucumis sativus][more]
BLAST of MELO3C031524.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031524.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TX744.83e-119100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3B9983.39e-11799.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LH074.33e-5488.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034710 PE=4 SV=1[more]
BLAST of MELO3C031524.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031524.jh1.t1MELO3C031524.jh1.t1mRNA