MELO3C031500 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTAAATTTTTTTCTCAATGTATCTATGTACGTACACGATAAATGAAGCACTGATAGATCACTTCAAGCACAATGATCATTGGATGTGCTTATGGTTTTTGTAACACATTTGATTGACATGTTTACGTTTATTTTACAGTACAACAAGTTCGTCACGAGCTCTTAAACATTTGTGGATGAAAGAGGAGTTTACCCTTGTTAAGTGTTTGGTGGAGTTGGTTTCCACTGGTGGCTGGAAATCGGACAACGGGACCTTCAGATTCGGGTACCTAGCATAGTTATAGAGAATAATGGCAGAGAAGTTGCTAGGCTGTAACATTTAGGGGACCTCGACAATTAATTATCGGATAAAGAGCTTGAAGAGAACATTTCAGGCCATATCATAAATGCGGGGCCTAACATGCAGTGGGTTTGGTTGGAACAATGAAGTCAAGTGCATCATTGCTGAGAAGGAATTGTTGGACACTTGGGTGAAGGTAAGCGATCTAATTTTGAACAACTGTTATTTGTTTATAATAGAAAATACAACGGATAATTTATATAAACATTTCCATAGAGCCATCCTGTTGCCAAGGGCCTCCTACACAAACCGTTTCCCTATTACGTCGACCTATGTTACGTATTCGGGAAAGGTCGTGCTACGGGAGCACGCACAGACTATGAGGGATTTTCCATTGATGATGAAAAACGATATGGAGATCACTATGATGTATAG TGTAAATTTTTTTCTCAATGTATCTATGTACGTACACGATAAATGAAGCACTGATAGATCACTTCAAGCACAATGATCATTGGATGTGCTTATGGTTTTTGTAACACATTTGATTGACATGTTTACGTTTATTTTACAGTACAACAAGTTCGTCACGAGCTCTTAAACATTTGTGGATGAAAGAGGAGTTTACCCTTGTTAAGTGTTTGGTGGAGTTGGTTTCCACTGGTGGCTGGAAATCGGACAACGGGACCTTCAGATTCGGGTACCTAGCATAGTTATAGAGAATAATGGCAGAGAAGTTGCTAGGCTGTAACATTTAGGGGACCTCGACAATTAATTATCGGATAAAGAGCTTGAAGAGAACATTTCAGGCCATATCATAAATGCGGGGCCTAACATGCAGTGGGTTTGGTTGGAACAATGAAGTCAAGTGCATCATTGCTGAGAAGGAATTGTTGGACACTTGGGTGAAGAGCCATCCTGTTGCCAAGGGCCTCCTACACAAACCGTTTCCCTATTACGTCGACCTATGTTACGTATTCGGGAAAGGTCGTGCTACGGGAGCACGCACAGACTATGAGGGATTTTCCATTGATGATGAAAAACGATATGGAGATCACTATGATGTATAG ATGCGGGGCCTAACATGCAGTGGGTTTGGTTGGAACAATGAAGTCAAGTGCATCATTGCTGAGAAGGAATTGTTGGACACTTGGGTGAAGAGCCATCCTGTTGCCAAGGGCCTCCTACACAAACCGTTTCCCTATTACGTCGACCTATGTTACGTATTCGGGAAAGGTCGTGCTACGGGAGCACGCACAGACTATGAGGGATTTTCCATTGATGATGAAAAACGATATGGAGATCACTATGATGTATAG MRGLTCSGFGWNNEVKCIIAEKELLDTWVKSHPVAKGLLHKPFPYYVDLCYVFGKGRATGARTDYEGFSIDDEKRYGDHYDV Homology
BLAST of MELO3C031500 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 113.6 bits (283), Expect = 8.0e-22 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of MELO3C031500 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 1.8e-21 Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C031500 vs. NCBI nr
Match: KAA0050293.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 111.7 bits (278), Expect = 3.0e-21 Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of MELO3C031500 vs. NCBI nr
Match: KAA0025858.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110.9 bits (276), Expect = 5.2e-21 Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 0
BLAST of MELO3C031500 vs. NCBI nr
Match: KAA0049911.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110.5 bits (275), Expect = 6.8e-21 Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0
BLAST of MELO3C031500 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.9e-22 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of MELO3C031500 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.9e-22 Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
BLAST of MELO3C031500 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.6e-22 Identity = 47/64 (73.44%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of MELO3C031500 vs. ExPASy TrEMBL
Match: A0A5A7U308 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00120 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21 Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of MELO3C031500 vs. ExPASy TrEMBL
Match: A0A5A7SI64 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001320 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.5e-21 Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 0
BLAST of MELO3C031500 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 2.7e-07 Identity = 19/57 (33.33%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of MELO3C031500 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06 Identity = 18/51 (35.29%), Postives = 30/51 (58.82%), Query Frame = 0
BLAST of MELO3C031500 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06 Identity = 18/51 (35.29%), Postives = 30/51 (58.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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