MELO3C031482 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031482
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr05: 20916717 .. 20917335 (-)
RNA-Seq Expression	MELO3C031482
Synteny	MELO3C031482

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATCGCCCCTAGAGTGGAGAAGCCTATTTCCCCACACGCCGTTCGCTTCAGCCAGGCTATAAGTGTGTGCGTGCGAAAGACATTTCCCATCCGCTGCCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTTAAGGGCGACCTCCAGGTAATTAATTGCACTACACATTTATGATTTCATTTGAAACATATCTAAGTTAACCAATCTAATGTGTTATTTTTGTAATGTGTAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCACGACTTTTAAAGAGTTTTGAGCCGACTGTCACAGACACTTCAAAAAGTACAACGACCCGGAGGAGGCTCGTGCCAACCCACGAAACGTATTGGTTGGACGTCATGAGGATTGACACTTCCTCTGCGACTACTACATGAGCCGTGCATTCCAGGTATTTGTCATGATTAATTATGATTTCAAGTTTTAATATGTATAAGAAATAAACAATATAATTATTTTCATGCAGGTGCAATCACAGATGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGCAGCGAGTCCAAGTTGTTTCTACAACGATAG

mRNA sequence

ATGACGATCGCCCCTAGAGTGGAGAAGCCTATTTCCCCACACGCCGTTCGCTTCAGCCAGGCTATAAGTGTGTGCGTGCGAAAGACATTTCCCATCCGCTGCCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTTAAGGGCGACCTCCAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGACACTTCAAAAAGTACAACGACCCGGAGGAGGCTCGTGCCAACCCACGAAACGTGCAATCACAGATGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGCAGCGAGTCCAAGTTGTTTCTACAACGATAG

Coding sequence (CDS)

ATGACGATCGCCCCTAGAGTGGAGAAGCCTATTTCCCCACACGCCGTTCGCTTCAGCCAGGCTATAAGTGTGTGCGTGCGAAAGACATTTCCCATCCGCTGCCTTAAGTGGGCGGACGTTGGGAGAGAATACATTGAGGTCGTTAAGGGCGACCTCCAGCGATTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGACACTTCAAAAAGTACAACGACCCGGAGGAGGCTCGTGCCAACCCACGAAACGTGCAATCACAGATGAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGCAGCGAGTCCAAGTTGTTTCTACAACGATAG

Protein sequence

MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDFNDQAMNRHFKKYNDPEEARANPRNVQSQMNKAARQKQPYNHSSESKLFLQR

Homology

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BLAST of MELO3C031482 vs. NCBI nr
Match: KAA0037213.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 3.2e-42
Identity = 97/132 (73.48%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTFP+RCLKW DVGREYIEVVKGDLQR FVLDF
Sbjct: 64  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDF 123

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEE RANP N   QS+ NKAARQKQPY
Sbjct: 124 NDQAMNRFVEHQMLTTFKEFRADCYRHFKKYSDPEETRANPPNALEQSRTNKAARQKQPY 183

[Close]

BLAST of MELO3C031482 vs. NCBI nr
Match: KAA0025427.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04756.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 5.5e-42
Identity = 98/132 (74.24%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKP SPHAVRFSQAI VCVRKTFPI CLKWADVGREYIEVVKGDLQR FVLDF
Sbjct: 50  MTIAPGAEKPSSPHAVRFSQAIGVCVRKTFPIHCLKWADVGREYIEVVKGDLQRLFVLDF 109

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEEARANP N   QS+ NKAARQKQPY
Sbjct: 110 NDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPY 169

[Close]

BLAST of MELO3C031482 vs. NCBI nr
Match: KAA0041316.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 9.4e-42
Identity = 97/132 (73.48%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTF +RCLKW DVGREYIEVVKGDLQR FVLDF
Sbjct: 70  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFSVRCLKWTDVGREYIEVVKGDLQRLFVLDF 129

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEEARANP N   QS+ NKAARQKQPY
Sbjct: 130 NDQAMNRFVEHRMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPY 189

[Close]

BLAST of MELO3C031482 vs. NCBI nr
Match: KAA0033296.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 9.4e-42
Identity = 97/132 (73.48%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTF +RCLKWADVGREYIEVVKGDLQR FVLDF
Sbjct: 63  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFSVRCLKWADVGREYIEVVKGDLQRLFVLDF 122

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEEARANP N   QS+ NK ARQKQPY
Sbjct: 123 NDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKVARQKQPY 182

[Close]

BLAST of MELO3C031482 vs. NCBI nr
Match: KAA0036425.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0049153.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0050864.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0051889.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0060883.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 4.7e-41
Identity = 99/152 (65.13%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTFP+RCLKW DVGREYIEVVKGDLQRFFVLDF
Sbjct: 64  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDF 123

Query: 61  NDQAMNR-------------------HFKKYNDPEEARANPRNV---------------- 112
           NDQAMNR                   HFKKY+DPEEARANP N                 
Sbjct: 124 NDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYI 183

[Close]

BLAST of MELO3C031482 vs. ExPASy TrEMBL
Match: A0A5A7T2L6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001270 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 97/132 (73.48%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTFP+RCLKW DVGREYIEVVKGDLQR FVLDF
Sbjct: 64  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRLFVLDF 123

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEE RANP N   QS+ NKAARQKQPY
Sbjct: 124 NDQAMNRFVEHQMLTTFKEFRADCYRHFKKYSDPEETRANPPNALEQSRTNKAARQKQPY 183

[Close]

BLAST of MELO3C031482 vs. ExPASy TrEMBL
Match: A0A5D3C2U8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00580 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 98/132 (74.24%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKP SPHAVRFSQAI VCVRKTFPI CLKWADVGREYIEVVKGDLQR FVLDF
Sbjct: 50  MTIAPGAEKPSSPHAVRFSQAIGVCVRKTFPIHCLKWADVGREYIEVVKGDLQRLFVLDF 109

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEEARANP N   QS+ NKAARQKQPY
Sbjct: 110 NDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPY 169

[Close]

BLAST of MELO3C031482 vs. ExPASy TrEMBL
Match: A0A5A7TGY7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G003170 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42
Identity = 97/132 (73.48%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTF +RCLKW DVGREYIEVVKGDLQR FVLDF
Sbjct: 70  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFSVRCLKWTDVGREYIEVVKGDLQRLFVLDF 129

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEEARANP N   QS+ NKAARQKQPY
Sbjct: 130 NDQAMNRFVEHRMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKAARQKQPY 189

[Close]

BLAST of MELO3C031482 vs. ExPASy TrEMBL
Match: A0A5A7STH7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G001060 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42
Identity = 97/132 (73.48%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTF +RCLKWADVGREYIEVVKGDLQR FVLDF
Sbjct: 63  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFSVRCLKWADVGREYIEVVKGDLQRLFVLDF 122

Query: 61  NDQAMN-------------------RHFKKYNDPEEARANPRNV--QSQMNKAARQKQPY 112
           NDQAMN                   RHFKKY+DPEEARANP N   QS+ NK ARQKQPY
Sbjct: 123 NDQAMNRFVEHQMLTTFKEFRADCHRHFKKYSDPEEARANPPNALEQSRTNKVARQKQPY 182

[Close]

BLAST of MELO3C031482 vs. ExPASy TrEMBL
Match: A0A5A7T4P0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00310 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41
Identity = 99/152 (65.13%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 1   MTIAPRVEKPISPHAVRFSQAISVCVRKTFPIRCLKWADVGREYIEVVKGDLQRFFVLDF 60
           MTIAP  EKPISPHAVRFSQAI VCVRKTFP+RCLKW DVGREYIEVVKGDLQRFFVLDF
Sbjct: 64  MTIAPGAEKPISPHAVRFSQAIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDF 123

Query: 61  NDQAMNR-------------------HFKKYNDPEEARANPRNV---------------- 112
           NDQAMNR                   HFKKY+DPEEARANP N                 
Sbjct: 124 NDQAMNRFVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYI 183

The following BLAST results are available for this feature:

BLAST of MELO3C031482 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037213.1	3.2e-42	73.48	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0025427.1	5.5e-42	74.24	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK04756.1 CACTA en-...	[more]
KAA0041316.1	9.4e-42	73.48	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0033296.1	9.4e-42	73.48	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0036425.1	4.7e-41	65.13	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0049153.1 CACTA e...	[more]

BLAST of MELO3C031482 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C031482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2L6	1.6e-42	73.48	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3C2U8	2.7e-42	74.24	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TGY7	4.6e-42	73.48	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7STH7	4.6e-42	73.48	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7T4P0	2.3e-41	65.13	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C031482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031482.1	MELO3C031482.1	mRNA