MELO3C031461 (gene) Melon (DHL92) v4

Overview
NameMELO3C031461
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Locationchr05: 19503446 .. 19505465 (+)
RNA-Seq ExpressionMELO3C031461
SyntenyMELO3C031461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTAAGATGGATTACAAAGGAAAACGCCTAAAAAGAGTAATTTGGAACCTAAAACACCAACTAGAGAGTGATATGTTATGAGTAATTTTGCAGCTGAAGATAAAATCTAAAAACTGAGACAGGATGAACCCAATAACGACTGTTGAAACTCGAGGTCGATACTACTTTGGAATCTTAAAATCCCAAAACAACTAGACTAGGGAAACAAACAAAATTAGGCCCTCCAAACCTATTTGTCCATGCACCACTACTGGAGGGCACTTGCTTCATTCCCCTCCCATTGGCCCAACTCGTGATTCAAAAGCAATGTAAAAAAAATGGTATGGTCTGATAACTTATTATTATGTAGATTGTCTATGTTTATAACTTTACCATGAGCTAAACCATGAGACGTGAAATATGTAGATTTTCTATTTCTCTATATTTGATTATTATGTAGATTGTCTATGTTTATAACTTAACCATGAGTTGTTGAGTTTGTAAATCTTAGGGTTTTTATGTAGCTTTTGGATAGTTCAAGTTGTTTTAATTGTTTTTCACTACGAGAAATTTGGCCAATGATGTCGGTTGGATTGCACATTAGAAAGGACCTTGAGCTCGAACGATGGTGCGTGAATATTAAACTTCTAGGTCTATGGTTGACATTATATCAATTGTGGTCTGCACTATTAAACTTCTAAGTGCATAATTCTCTTTGTTTTGCATGTTATCTTTTTTCTACGATACAAATCCACTGTCGATGATAAGCAAAGGTCAAGTGAGATTTCTTTGGCCATAATTCTCCATCGATAGAACAAATGGTTTAGTAAGATTTAAAAAGAGGATTAGAATTTATTACCGAGAATTTATATTATATGGCAAAATTGACTAACTTATTTACAAATATAGCAACTATTTGTAAGAATATGCAAAAATAGCAATTTGGTATAGGATTAAAATGCATGCATAGAGTTATTTGCATATGTTGTTGTATTTATATATCTCAAAGCATGTCCAAATGTTTTTCTCTTTCTTTTTAGGAAAGAAATTGAAGTTGATCATTTACAGACATTTCAAAGAGAGCCAAATTTAATTTGTTGATATCTTTGTGCTTTTGGAATCTTGATTGGTTGCATGTATCACTGCACACAACACTTTGGAGTAGCTTAAATTGCATACAAATTAACCTAATCCCTTGGTTTTTTTTTTTTTTTTTTTTTTTGCAGAACCTCTGTGGAATCGACGAGCCACACGTTATGTGGGGGTGTAATAAGCATTTGACTTCTTTTTTCCTTGGTGTTCCTTTTTGATTTCGGGCGAATGTTGGAGCCCAGCAGACCGTTGGAATGGGGTGATCAAGGTGTTGAAAGGGTCGGTCTGAGACGTTGTTGCCATCCCTTTTGTGGGGTGTTTGTAATTACAGAAACCTTTTTAAGAAAAGCGGGTAATGCCCGGCAGCGCAATATTTTGCTGAACAAGATCTCTTTTTCATGTGGAGGAGTTTGTTGGTGTTGGTGGGGATGGCCAGGCGTCGTTGAGGAGGGAGAGCCCGAGGCGAGTCATGAGGTCTGGGTGCCGCCTGATGTTAATTTGTTTTTGAAAGTTTAACTCTGATGCTCTGTGAAACGATGTTGAGGAGGTTGGGTGGCATTAGTTGGGTTGTCCATGACTCTTCTTGATGTCTCATCCTTAATGGTTGTGAGAGAGTTGGGTTCAAGTGGCCCGGAGATTCTTGAAACTTTGTCTATGTTATCATTTTTAAGCATAGGTCTCTTCTCCATGTGGATGTGGAGTCTTGATTGTGCTAATCATATAAATGCCATTTAGTATAAGTTTTTGGTTATGGCGGAGTTCTCGACTTTTGTTGATGAGGTGGAGTTGTGGGTTGTGTATGTCTATGTTGTTTCTTTTGACGGGTGTGTGTTCTGTGAATGGAGTCATTCATTGTTTTTGACTTGTGTCGAGTTGTATGAGGATTGGGCAGATTATTTGTTTCTAATTCTTCTTCTAACTCTGAAGTAGTGGTTAGGTGTCC

mRNA sequence

ATGGAAAGTAAGATGGATTACAAAGGAAAACGCCTAAAAAGACTTTTGGATAGTTCAAGTTGTTTTAATTGTTTTTCACTACGAGAAATTTGGCCAATGATGTCGGTTGGATTGCACATTAGAAAGGACCTTGAGCTCGAACGATGGTGCAACCTCTGTGGAATCGACGAGCCACACGTTATGTGGGGGTGTAATAAGCATTTGACTTCTTTTTTCCTTGGTGTTCCTTTTTGATTTCGGGCGAATGTTGGAGCCCAGCAGACCGTTGGAATGGGGTGATCAAGGTGTTGAAAGGGTCGGTCTGAGACGTTGTTGCCATCCCTTTTGTGGGGTGTTTGTAATTACAGAAACCTTTTTAAGAAAAGCGGGTAATGCCCGGCAGCGCAATATTTTGCTGAACAAGATCTCTTTTTCATGTGGAGGAGTTTGTTGGTGTTGGTGGGGATGGCCAGGCGTCGTTGAGGAGGGAGAGCCCGAGGCGAGTCATGAGGTCTGGGTGCCGCCTGATGTTAATTTGTTTTTGAAAGTTTAACTCTGATGCTCTGTGAAACGATGTTGAGGAGGTTGGGTGGCATTAGTTGGGTTGTCCATGACTCTTCTTGATGTCTCATCCTTAATGGTTGTGAGAGAGTTGGGTTCAAGTGGCCCGGAGATTCTTGAAACTTTGTCTATGTTATCATTTTTAAGCATAGGTCTCTTCTCCATGTGGATGTGGAGTCTTGATTGTGCTAATCATATAAATGCCATTTAGTATAAGTTTTTGGTTATGGCGGAGTTCTCGACTTTTGTTGATGAGGTGGAGTTGTGGGTTGTGTATGTCTATGTTGTTTCTTTTGACGGGTGTGTGTTCTGTGAATGGAGTCATTCATTGTTTTTGACTTGTGTCGAGTTGTATGAGGATTGGGCAGATTATTTGTTTCTAATTCTTCTTCTAACTCTGAAGTAGTGGTTAGGTGTCC

Coding sequence (CDS)

ATGTTGGAGCCCAGCAGACCGTTGGAATGGGGTGATCAAGGTGTTGAAAGGGTCGGTCTGAGACGTTGTTGCCATCCCTTTTGTGGGGTGTTTGTAATTACAGAAACCTTTTTAAGAAAAGCGGGTAATGCCCGGCAGCGCAATATTTTGCTGAACAAGATCTCTTTTTCATGTGGAGGAGTTTGTTGGTGTTGGTGGGGATGGCCAGGCGTCGTTGAGGAGGGAGAGCCCGAGGCGAGTCATGAGGTCTGGGTGCCGCCTGATGTTAATTTGTTTTTGAAAGTTTAA

Protein sequence

MLEPSRPLEWGDQGVERVGLRRCCHPFCGVFVITETFLRKAGNARQRNILLNKISFSCGGVCWCWWGWPGVVEEGEPEASHEVWVPPDVNLFLKV
Homology
[Close]
BLAST of MELO3C031461 vs. NCBI nr
Match: KAA0047652.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08310.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 9.2e-46
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MLEPSRPLEWGDQGVERVGLRRCCHPFCGVFVITETFLRKAGNARQRNILLNKISFSCGG 60
          MLEPSRPLEWGDQGVERVGLRRCCHPFCGVFVITETFLRKAGNARQRNILLNKISFSCGG
Sbjct: 1  MLEPSRPLEWGDQGVERVGLRRCCHPFCGVFVITETFLRKAGNARQRNILLNKISFSCGG 60

Query: 61 VCWCWWGWPGVVEEGEPEASHE 83
          VCWCWWGWPGVVEEGEPEASHE
Sbjct: 61 VCWCWWGWPGVVEEGEPEASHE 82

[Close]
BLAST of MELO3C031461 vs. ExPASy TrEMBL
Match: A0A5D3CAD2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001000 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MLEPSRPLEWGDQGVERVGLRRCCHPFCGVFVITETFLRKAGNARQRNILLNKISFSCGG 60
          MLEPSRPLEWGDQGVERVGLRRCCHPFCGVFVITETFLRKAGNARQRNILLNKISFSCGG
Sbjct: 1  MLEPSRPLEWGDQGVERVGLRRCCHPFCGVFVITETFLRKAGNARQRNILLNKISFSCGG 60

Query: 61 VCWCWWGWPGVVEEGEPEASHE 83
          VCWCWWGWPGVVEEGEPEASHE
Sbjct: 61 VCWCWWGWPGVVEEGEPEASHE 82

The following BLAST results are available for this feature:
BLAST of MELO3C031461 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047652.19.2e-46100.00CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK08310.1 CACTA en-... [more]
BLAST of MELO3C031461 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031461 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CAD24.5e-46100.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO3C031461 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031461.1MELO3C031461.1mRNA