MELO3C031433 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATCGATTGTATCTTTTGTTTGTGACTGTTAAATGTCAAAATGTGAAATTGTGAAATTACTAACGTACTCCATGTATTTCTTGTAACTTTTCATTCTCAGTATGTCAACCTCAAACTGTGCCCTGAGACATGTCTGGACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAACGGAGCTGGTGTCGAGGGGATGGAAATCGGATAATGGTACGTTTCGGCCAGGGTACCTGGTCCCGTAGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACTGTAATTGACAGTAGAATAAAGACACTGAAGCAGACATTCCAGGCCATCGCCGAAATGCGGGGTCCAGCGTGTAGTGGCCTTGGGTGGAACGATAAAGAGAAATGTATCATTGCGGAGAAAGGATTATTTGATAATTGGGTTAGGGTAAGGAAAATAATATAAACATCACACAACATTTGCAATGTACATTTACTTAACAATTTTTCTCTCAATACACATAAGTGATCTTTTTTTCTCCGCAGTCGTATCCTGCAGCGAAGGAACTCCTGAACAAACTGTTTCCGTATTACGACGAACTTACATATGTGTTCGGTCGCGATAAGGCGACGGGTCGGTTCGCTGAGACATTTGCCGACGTGGGTCTAACGAGCTTAACGGGTATGACGGATTTGATATGGGGGATGGAAATGAGGAGTTCTCGCCCGTGAACAGCCAGGGGATTGACCTGTCGCAGGACGATGTACACGCATCACGACCTTCTTGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAAAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCAACCAAACAAACGAGCAACTCATGATGATTGCAGAGTGGCCTACATGCGCCCTTGCCAATGACAACCATGTGCGCATGGAATTCTTCTGCATATTGCGTGAGATGCTAGAACTAATGGTTTGGATAGGGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGGTTTCATACTCATGCATGAGGATGAGGGGGAGGGATTTTATAGAGTCCCCCTACGAGACATCACGGGATAGTCTATGTTTATACCAACCTGGGTTGCTTCTTATTAGCTTACTTTTTTTTTTTTCTGTATGATGTTGACTGTTTATGTTTTTTCTATTGTAGACAACTATCTTTTTCCTTCATAATGTTTATCTAAAATTAAGGAAAATAGTCACAATTTCACCCAAGCGTTATAACAGGTAATTATATATGTTCAAAATAGGGGGACATCGCTATCGCCACTTACAAATAGGAAATAATTAATTTGTCTTTCTAAAAAATGAATTTTAATAAATTTTTCACAATATGTTCAGAAATTAATTTCAAATTGGACAACTGTCTTTACTAATTTAATAACATTACACATACAATAAATTATTTGCAATAAGACGGGTTTGACGCTTTCGTAAAAAAGTATGCAATAAGAATTTTTTTTATCATATTTACAATCTCATTTAAAAAATATTATACTACATAAAAAAAATTTATTAATCCAACCCATATAACACTTTCCGCAAATAAATTTTATCATAAATTTCACATAAACCTACCCACCTAACCCTTCCCCCAAACACATCTTATCATAAAATCTCCATTAACTCTTCCCACCTAACCCTTCCCCCAAACACATATTATCATAAAACTACATTTCTAAACCCTTCCCCCAAACTAGTTTTATCATAACACTAACCCTTCCTTAAATCAACCCTTCCCCCAAATGCACCTTAAGACATTTATCTGATAATATAAATAGTCAAAGTCAGAAAGAAAAAGGCTTGCTAGAAATAATTACTACCCTTCCACTTGTGAGCCAACCTCTTCCACTTTGTGATATACGACCATCATCAAGTAGTACTCTCAAACTCTTTCCCTGTGGTAGCAACATTTACTTCCAGTCCATTCCCCTTACCTATGGTAAGGTTCTGGAATCACTGGAGCTCATTTAAAATAAAGCTCACCTGATTTTTCTCATTGATGGGACCACCATTTACTTCAGCAATATTAAAATGCATCATCATGTCCATGACATGTTCTCTAACAGAGGTCCCTTCCTTCATTTGCTTGGTGTAAATATACTTAATTGCTTCGTGTCTGAGAGACCATGAAGGCTAACCAAACATCTCCATCAATGAATCCATAATATCTTTAGCCATGGCTAAGGATTCATGTTTCTTTGCCAAAACATCAGACATGCTGGCAAGAATATAAACACGGGCCTTTTCATTGGCCTTAACCCATCGATCATATGCTTCTCAAACATTTCGATTAGCATTCGAGGCAAAGGCTTGAAGATGTTCCTCAATTAAGACAAACCTTAAATCATCTATGACTAGTATTGTATTTAAGTTTGATTTTCAAGTAGCATAATTATCGCCATTAACTTTCTGAGAAGCTAAGAGTTGTACTATTGAGTTGTTCATGCTGGAAAAGTAAAATATACTCTATTTAGTAAAAAACTATAATCCTTTAAGAACCAATTAATTTAGCAAATATTAATAACGTACCCAGTATTATTATGTTTTACAACGATATTTCAAAGGTTTAGAAGAACCTCTACTGAAGGTTAGTCGATTACTCTTCCTTTGAACCATGACAATCTTGACCAAATGCTAACTCCTAAATATCTCATACTCGCTTAGCACTTAGTTACCGCTAGATTGGTTGAGAATATACTAACAACTTAGTAATTCTTGTAAGTGTAACCTTTCATTTTCAGATCTCAAAGATAAGAATCATTATGTTTCGAAAGTGAAAAGACAATATGAAAACTAA CATCGATTGTATCTTTTGTTTGTGACTGTTAAATGTCAAAATGTGAAATTGTGAAATTACTAACGTACTCCATGTATTTCTTGTAACTTTTCATTCTCAGTATGTCAACCTCAAACTGTGCCCTGAGACATGTCTGGACGAAGGAGGAGGAGGGCACTCTTGTGGAATGTTTAACGGAGCTGGTGTCGAGGGGATGGAAATCGGATAATGGTACGTTTCGGCCAGGGTACCTGGTCCCGTAGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTCCACGCAACGACTGTAATTGACAGTAGAATAAAGACACTGAAGCAGACATTCCAGGCCATCGCCGAAATGCGGGGTCCAGCGTGTAGTGGCCTTGGGTGGAACGATAAAGAGAAATGTATCATTGCGGAGAAAGGATTATTTGATAATTGGGTTAGGTCGTATCCTGCAGCGAAGGAACTCCTGAACAAACTGTTTCCGTATTACGACGAACTTACATATGTGTTCGGTCGCGATAAGGCGACGGGTCGGTTCGCTGAGACATTTGCCGACGTGGGTCTAACGAGCTTAACGGGTATGACGGATTTGATATGGGGGATGGAAATGAGGAGTTCTCGCCCGTGAACAGCCAGGGGATTGACCTGTCGCAGGACGATGTACACGCATCACGACCTTCTTGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAAAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCAACCAAACAAACGAGCAACTCATGATGATTGCAGAGTGGCCTACATGCGCCCTTGCCAATGACAACCATGTGCGCATGGAATTCTTCTGCATATTGCGTGAGATGCTAGAACTAATGGTTTGGATAGGGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGACAACTATCTTTTTCCTTCATAATGTTTATCTAAAATTAAGGAAAATAGTCACAATTTCACCCAAGCGTTATAACAGTCAAAGTCAGAAAGAAAAAGGCTTGCTAGAAATAATTACTACCCTTCCACTTGTGAGCCAACCTCTTCCACTTTGTGATATACGACCATCATCAAGTAGTACTCTCAAACTCTTTCCCTGTGGTAGCAACATTTACTTCCAGTCCATTCCCCTTACCTATGATCTCAAAGATAAGAATCATTATGTTTCGAAAGTGAAAAGACAATATGAAAACTAA ATGGGGGATGGAAATGAGGAGTTCTCGCCCGTGAACAGCCAGGGGATTGACCTGTCGCAGGACGATGTACACGCATCACGACCTTCTTGCGCTTCAGAGGGTAGGACCGGATCGAGTGGATCCAAAAGGAAGAGGGGAAGTCAGCGAAAGGTGGATGTTGAAGGCATACATCTGGCGCTCAACCAAACAAACGAGCAACTCATGATGATTGCAGAGTGGCCTACATGCGCCCTTGCCAATGACAACCATGTGCGCATGGAATTCTTCTGCATATTGCGTGAGATGCTAGAACTAATGGTTTGGATAGGGCGCTATTGCAAAGGCATCTTCTGTCTCGTATGGACGACCTTCGGGACAACTATCTTTTTCCTTCATAATGTTTATCTAAAATTAAGGAAAATAGTCACAATTTCACCCAAGCGTTATAACAGTCAAAGTCAGAAAGAAAAAGGCTTGCTAGAAATAATTACTACCCTTCCACTTGTGAGCCAACCTCTTCCACTTTGTGATATACGACCATCATCAAGTAGTACTCTCAAACTCTTTCCCTGTGGTAGCAACATTTACTTCCAGTCCATTCCCCTTACCTATGATCTCAAAGATAAGAATCATTATGTTTCGAAAGTGAAAAGACAATATGAAAACTAA MGDGNEEFSPVNSQGIDLSQDDVHASRPSCASEGRTGSSGSKRKRGSQRKVDVEGIHLALNQTNEQLMMIAEWPTCALANDNHVRMEFFCILREMLELMVWIGRYCKGIFCLVWTTFGTTIFFLHNVYLKLRKIVTISPKRYNSQSQKEKGLLEIITTLPLVSQPLPLCDIRPSSSSTLKLFPCGSNIYFQSIPLTYDLKDKNHYVSKVKRQYEN Homology
BLAST of MELO3C031433 vs. NCBI nr
Match: TYK07718.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 205.3 bits (521), Expect = 5.3e-49 Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of MELO3C031433 vs. NCBI nr
Match: KAA0049990.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 191.8 bits (486), Expect = 6.1e-45 Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of MELO3C031433 vs. NCBI nr
Match: KAA0067583.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 170.2 bits (430), Expect = 1.9e-38 Identity = 86/120 (71.67%), Postives = 92/120 (76.67%), Query Frame = 0
BLAST of MELO3C031433 vs. NCBI nr
Match: KAA0054705.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ95602.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 161.8 bits (408), Expect = 6.7e-36 Identity = 83/98 (84.69%), Postives = 85/98 (86.73%), Query Frame = 0
BLAST of MELO3C031433 vs. NCBI nr
Match: KAA0031723.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 8.8e-36 Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of MELO3C031433 vs. ExPASy TrEMBL
Match: A0A5D3C970 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G001440 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.6e-49 Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of MELO3C031433 vs. ExPASy TrEMBL
Match: A0A5A7U3X7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001660 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.9e-45 Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of MELO3C031433 vs. ExPASy TrEMBL
Match: A0A5A7VHM3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00480 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 9.1e-39 Identity = 86/120 (71.67%), Postives = 92/120 (76.67%), Query Frame = 0
BLAST of MELO3C031433 vs. ExPASy TrEMBL
Match: A0A5D3B6Y0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00160 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 3.2e-36 Identity = 83/98 (84.69%), Postives = 85/98 (86.73%), Query Frame = 0
BLAST of MELO3C031433 vs. ExPASy TrEMBL
Match: A0A5A7SNB3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005110 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 4.2e-36 Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|