MELO3C031427.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031427.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr05: 16707480 .. 16709913 (+)
RNA-Seq ExpressionMELO3C031427.jh1
SyntenyMELO3C031427.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGGGCCTCGCTGCTTGGAAAGCGCATTCTCTTGCTGTTAAAGTTCGATCGAGCAAATCTCCTGGTAAGAGATTTCTACTACTAGATCTACGACTACAATCATGAGACCGCATGCATTCCTAGTTATGCACTTGAGGACTAGACTGCATAACGATATGTTAATTATTGAGGGCATGATGTAACTGTTGATGTGAATTATTATGATGGCATGGTATAATGTGTTGACGGCTGGTTATGACTTTATGTTTGGATAATGTGATGAAATGTGATATGATGATTAGACTGATATGATTACATGATGATGTTATGTATATGTATGTTATGGTTAGGGTACCTGTTAGCTTAGCCTATTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCGATTTAGGACTACGTAGTCCGACGGGATGCCAGTCTAGCATGGATATAGATATGATTCGAGTGATTCGACGGGATCCTCGCAGCCCGAATATCTTAGTGTTTCCTCCGAGTTTGCTACAGACCAGTATGTCCTAGGTGCTCTCCCGGGACACCGAAGACCAGATTTTCGTTCCTACGAGAGCGCATGTTGCACGTGTTCGGGAACGTGCCAGTTATTGGGTACCATTTTCAGGACTCTATTAGGAAGTTAACAGGTATCTAGTAGGACTAGTAGTGGGTCCCTTACTGAGTATTTTATACTCACTCTCTCCATGTCATGTTTTTCAAGTAGAGGCCGAGGTGTAAGGGCAAGGGCAAGCTGGCGAGCGACCAGAAGTGACGTGGCGAGCCATAGGGATTTCTACTTCCGCGGGTGTTTTGAACATTTAGTACTTGAGTTTTTAATTTTTTTTCTTTATTTACCATTTCATTTCTTTAAAAGTAGATAGGGCCCGAGTAGGATTTTAAAATTTGTTTATATTTCGCACATTACCCTCATTTGGTTTTTATAAATAAAATTCTGAGGTTTTATTCATTTTAACCAAACTTTATGATTTAAATTATGATATTTACATTTAGTAATGACTTCAGCTTAGTATAAGGAGTTGGGTCCTTACATGGTGTGACTTGTGCATCCTTGATGCGTCTAAATGCTAAAGACACCCAGTCTTCAGTTTCTTAAGCTTCTTGCTTAATTGCCTCATAATCTTTCATAACTTACCTTATAACTTGGCAAATATCTTAGGCAATAAGAAAACACAACACAAAGGTGATATAACAAACTAAACTTTATTAATCTTTACTCAAGTACTTACAACAGCTTACAACTATAAACATAAATACAATAACTTTAAACTTAAATTAAATGCCTTGGCAGCCTTCTCGCCTAACAAGCCCTTCAACCTTCCCTACACGGTCTTAATGCTTGCTTCTTAGAAGATGAAATTTTGAAAACATAAATTTACAGACTCAGTAAGGTTTTAGTAAATTCTTTTCGAAAATATCTTTTACAAACATCATTTCGCCAATACTTTTGGTAAACATTAGTTCATCAAATCATCAAGTCATAAACTCTTTTAAAAACATAACATTTCATATAAAACAAAACATCAATTCATCATAGCTTTTCATTTCGCATAATGCATCATTTCACATAACACCCATTAGTTACCAACAATTCTCTAAGCTAGGTCACATAACTTCGCGTTTAGACTACTACAACAACTGCATCCGAGGATATACAGATTTGTCCTTGTTGCTTAGACCGCTAAGTTTTATATGCTCCTTTCCACGCAAAAGCCAGGTTCTCATCACCATGTAGCCTTGTAGATTTTATGGTGCCCTCTTCACTCTTTATGTGGACGTAAAAGTTGGCTTATTGATAAGAAGGAATTAACGGTTTGAAACCATATTTCAGAATCATTGAAATACATAAATCATGCTTCGAAACATATAGTGTTTTTATGTAAATCTCTTTTGAAACATTTATAATTTGAAATCATTATTCCAAATCAATAATCACTTTATCAAAATAGCTTGAAATCATATGAATCATTTGGAAGAAAACACTCACTCTACTTAGTTACTTGAACTTCAAGGACTTTCCTTCTTCCTCTTCTTGTGTAGGCAAATGGCAGCCACTTAAACTCTTAAACTTTCTTTCTCAAATAGGCAAAACAACAATACTTAAAGGTCTGAGCTTCTCTCTCTATTTATACTTCTTCATATCTATCTTAGTCACCCTTAAATCCATAATAACTTGCCAGCTCCAGCTTCTTAGTGGCACAGATGTAAACTTGAAATTTAACTTAATCATGCTTAACTAGATCTCTACGCATGGCCCACTTCAACACTTAAGGAAATTTTTTTTCTTCTCACCAAGTCCTTCTACTCGCGAAGAGTCTACTCTCCTAACCTTTCCTTCTCGCGTAATGCCTCAAATGTCAGAAGATCCTTATCGCGTAACTCCACTTTATAATGCCTTGTTTGTCCAACATGCCTAA

mRNA sequence

TTAGGGCCTCGCTGCTTGGAAAGCGCATTCTCTTGCTGTTAAAGTTCGATCGAGCAAATCTCCTGCCTATTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCGATTTAGGACTACGTAGTCCGACGGGATGCCAGTCTAGCATGGATATAGATATGATTCGAGTGATTCGACGGGATCCTCGCAGCCCGAATATCTTAGTGTTTCCTCCGAGTTTGCTACAGACCACCTTCTCGCCTAACAAGCCCTTCAACCTTCCCTACACGACCGCTAAGTTTTATATGCTCCTTTCCACGCAAAAGCCAGGTTCTCATCACCATGTAGCCTTGTAGATTTTATGGTGCCCTCTTCACTCTTTATGTGGACGTAAAAGTTGGCTTATTGATAAGAAGGAATTAACGATCTCTACGCATGGCCCACTTCAACACTTAAGGAAATTTTTTTTCTTCTCACCAAGTCCTTCTACTCGCGAAGAGTCTACTCTCCTAACCTTTCCTTCTCGCGTAATGCCTCAAATGTCAGAAGATCCTTATCGCGTAACTCCACTTTATAATGCCTTGTTTGTCCAACATGCCTAA

Coding sequence (CDS)

ATGGATATAGATATGATTCGAGTGATTCGACGGGATCCTCGCAGCCCGAATATCTTAGTGTTTCCTCCGAGTTTGCTACAGACCACCTTCTCGCCTAACAAGCCCTTCAACCTTCCCTACACGACCGCTAAGTTTTATATGCTCCTTTCCACGCAAAAGCCAGGTTCTCATCACCATGTAGCCTTGTAG

Protein sequence

MDIDMIRVIRRDPRSPNILVFPPSLLQTTFSPNKPFNLPYTTAKFYMLLSTQKPGSHHHVAL
Homology
[Close]
BLAST of MELO3C031427.jh1 vs. NCBI nr
Match: TYK28661.1 (hypothetical protein E5676_scaffold165G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 1.33e-08
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 1   MDIDMIRVIRRDPRSPNILVFPPSLLQTTFS 31
           MDIDMIRVIRRDPRSPNILVFPPSLLQT+ S
Sbjct: 223 MDIDMIRVIRRDPRSPNILVFPPSLLQTSMS 253

[Close]
BLAST of MELO3C031427.jh1 vs. NCBI nr
Match: KAA0061401.1 (hypothetical protein E6C27_scaffold749G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 1.81e-07
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 1   MDIDMIRVIRRDPRSPNILVFPPSLLQTTFS 31
           MDIDMIRVIRRDPRSPNILVFP SLLQT+ S
Sbjct: 223 MDIDMIRVIRRDPRSPNILVFPSSLLQTSMS 253

[Close]
BLAST of MELO3C031427.jh1 vs. NCBI nr
Match: KAA0039155.1 (hypothetical protein E6C27_scaffold121G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 52.8 bits (125), Expect = 2.63e-07
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 1  MDIDMIRVIRRDPRSPNILVFPPSLLQTT 29
          MDIDMIRVIRRDPRSP +LVFPP LLQT+
Sbjct: 1  MDIDMIRVIRRDPRSPIVLVFPPGLLQTS 29

[Close]
BLAST of MELO3C031427.jh1 vs. NCBI nr
Match: KAA0043615.1 (hypothetical protein E6C27_scaffold320G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 2.16e-06
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 1  MDIDMIRVIRRDPRSPNILVFPPSLLQTT 29
          MDIDMIRVIRRDPRSP +LVFPP  LQT+
Sbjct: 1  MDIDMIRVIRRDPRSPIVLVFPPGSLQTS 29

[Close]
BLAST of MELO3C031427.jh1 vs. NCBI nr
Match: KAA0066915.1 (hypothetical protein E6C27_scaffold550G00420 [Cucumis melo var. makuwa] >TYK30197.1 hypothetical protein E5676_scaffold595G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 2.16e-06
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 1  MDIDMIRVIRRDPRSPNILVFPPSLLQTT 29
          MDIDMIRVIRRDPRSP +LVFPP  LQT+
Sbjct: 1  MDIDMIRVIRRDPRSPIVLVFPPGSLQTS 29

[Close]
BLAST of MELO3C031427.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DYK0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00270 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.42e-09
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 1   MDIDMIRVIRRDPRSPNILVFPPSLLQTTFS 31
           MDIDMIRVIRRDPRSPNILVFPPSLLQT+ S
Sbjct: 223 MDIDMIRVIRRDPRSPNILVFPPSLLQTSMS 253

[Close]
BLAST of MELO3C031427.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V6P0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G00950 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.74e-08
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 1   MDIDMIRVIRRDPRSPNILVFPPSLLQTTFS 31
           MDIDMIRVIRRDPRSPNILVFP SLLQT+ S
Sbjct: 223 MDIDMIRVIRRDPRSPNILVFPSSLLQTSMS 253

[Close]
BLAST of MELO3C031427.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TCM3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00560 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.28e-07
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 1  MDIDMIRVIRRDPRSPNILVFPPSLLQTT 29
          MDIDMIRVIRRDPRSP +LVFPP LLQT+
Sbjct: 1  MDIDMIRVIRRDPRSPIVLVFPPGLLQTS 29

[Close]
BLAST of MELO3C031427.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E283 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00080 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.04e-06
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 1  MDIDMIRVIRRDPRSPNILVFPPSLLQTT 29
          MDIDMIRVIRRDPRSP +LVFPP  LQT+
Sbjct: 1  MDIDMIRVIRRDPRSPIVLVFPPGSLQTS 29

[Close]
BLAST of MELO3C031427.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TQB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00540 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.04e-06
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0 

Query: 1  MDIDMIRVIRRDPRSPNILVFPPSLLQTT 29
          MDIDMIRVIRRDPRSP +LVFPP  LQT+
Sbjct: 1  MDIDMIRVIRRDPRSPIVLVFPPGSLQTS 29

The following BLAST results are available for this feature:
BLAST of MELO3C031427.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK28661.11.33e-0893.55hypothetical protein E5676_scaffold165G00270 [Cucumis melo var. makuwa][more]
KAA0061401.11.81e-0790.32hypothetical protein E6C27_scaffold749G00950 [Cucumis melo var. makuwa][more]
KAA0039155.12.63e-0786.21hypothetical protein E6C27_scaffold121G00560 [Cucumis melo var. makuwa][more]
KAA0043615.12.16e-0682.76hypothetical protein E6C27_scaffold320G00540 [Cucumis melo var. makuwa][more]
KAA0066915.12.16e-0682.76hypothetical protein E6C27_scaffold550G00420 [Cucumis melo var. makuwa] >TYK3019... [more]
BLAST of MELO3C031427.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031427.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DYK06.42e-0993.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6P08.74e-0890.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TCM31.28e-0786.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E2831.04e-0682.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TQB91.04e-0682.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C031427.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031427.jh1.t1MELO3C031427.jh1.t1mRNA