MELO3C031340.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031340.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCACTA en-spm transposon protein
Locationchr05: 9668375 .. 9670185 (+)
RNA-Seq ExpressionMELO3C031340.jh1
SyntenyMELO3C031340.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTGGAAAAAGAGTTGGAACAGATGAAGAAATCATCAGTTGAAATTCAACTTTGTTGTGATGTGCTAATGATGACAACTTTCAGCGGTAGAGAAAGGAATGAGAAAGAATGAAACACTCTTTTCTTAGTTGTTGGTTTTGGTCACTACACTATTATTCCTATATTGGGTTTAAGGTCTCTCATTGTGGTCTACCCTGATTAACTACCATACCAACTTCTACCCTCTTTCCCAAAGCTAAGTCTCATCCCATTTGCCTTACCTTGCAAATATCCAATATGTATAATGTCAAATCTCTATATTGTAACAAAAGATTGTGAAACAATAAGACAACTTTTTGTTTTGTTTTGTTGTTTTTTAATACTCTTTCCCCACTCCTTCAATCATGTGGAATTAATATAACAATAGTTGGGGATATGTGTGTTGTTGTTAAAGAAGAAAAAGAATAACCCTTTTTATCTATAGATATAATAAGTGACTTCACCATCATCTAATCTAAAACTATAACTCTTAAATTTGTTCAATCCACTTCGATCCACCTTGTCTAATTGAGATAATTTTGAATGTTTTTAAAATCATTTTTTGAGTCTGAAATTGTTAAAATTCATTTTTAACATTTTTCAAAAAAACATGCTTTTATTCATTTGAAACTAATTTTAATCGTATAAAAATTGTACTATCCTATATATAAAACATAATGTAACACTCAAATGCATTATCGAAGTCTTTTACAAGTCATTGTTATTACAAACAAACAATCTTATTGAATGTTTGTTTTCTATGTCTATAGCCATTATGAAAAAGATGATAGAAGAATTAACTCGTGCACAACAGGGACCACCACATGATCTCTAGCTCTGCGGTATGTATATGTCTATTATTCTTAAGTTTTTGCAAATATATGATTATGTACTAAACTTAGTTATTTTTATATCATTTTTAGGACTGAAGGTGTAGAATGACGCGCATACGCACCTCGTTGGGAGACTTTTTCTTATGTTTATGTTTTTTCTATTTTGAGAACTATATTTATTGTAGTGAACTTATTCGTATTATTAATTTTAATTCTATATTTTTAATTTGTATTTGTATATTTTTTAATTTATTTTAATTTATATTCAATTTGTTTTAATTTAATCCAAAACGTCAAGAAATATTTTTGAGCAATCTGAACATCATTGTGAATGTTTGAGCAAAATATTATAAGGAAAAAAGTAGAAATAAAATATTAAAAAAATATATAAAAAGGAATTCTTGACGTAAAGAAACGTTGGAAAAGAGGATTTCTGGATGTCGGAAGGTGTGCCGGCATAGTCTGCGTCGGGAAAGAGGTATTCCCGATGCAGGCTATGTCGACACGTAGTTCGGCGTCGGGAGTGGCTTTCCCGATGCCGTACCAACACGGCGTCGGGAAAGCCTCTCCCGACGCCTTTCTCCTAACGCCTTTCTCCTAACGCCTTTCTCCCGACGCCTTTCTCCCGACGTTCTTTCCGACGCCGTTTTGTAGTCGAAATAACCTTTCCCGACGTACTTTTCATTTTCGCCGACGCTTTTTGGCATCAGAAGTACCCTTGTCTCTTGTAGTGATAATTTAATTTAGATGGTGTCACGATATTGGCCGTGAGCAGGATGCAGATAAGCCTCTCCTCAAAACTGTATTTCAGGTATTCCCTTTAATCTAGTTGAGGGTCATGGTGTATCTTTTATAATATTAATTTAATAATTTTAGTTGTTATATGCAGGTCATGACGAGATTATTCAATCCACATAAAACAACACTAATGTTTGTCATACGTGATTAAACAAGG

mRNA sequence

ATGGTGTTGGAAAAAGAGTTGGAACAGATGAAGAAATCATCAGTTGAAATTCAACTTTGTTGTGATGTGCTAATGATGACAACTTTCAGCGGAATTCTTGACGTAAAGAAACGTTGGAAAAGAGGATTTCTGGATGTCGGAAGGTGTGCCGGCATAGTCTGCGTCGGGAAAGAGGTATTCCCGATGCAGGCTATGTCGACACGTAGTTCGGCGTCGGGAGTGGCTTTCCCGATGCCGTACCAACACGGCGTCGGGAAAGCCTCTCCCGACGCCTTTCTCCTAACGCCTTTCTCCTAACGCCTTTCTCCCGACGCCTTTCTCCCGACATGGTGTCACGATATTGGCCGTGAGCAGGATGCAGATAAGCCTCTCCTCAAAACTGTATTTCAGGTCATGACGAGATTATTCAATCCACATAAAACAACACTAATGTTTGTCATACGTGATTAAACAAGG

Coding sequence (CDS)

ATGGTGTTGGAAAAAGAGTTGGAACAGATGAAGAAATCATCAGTTGAAATTCAACTTTGTTGTGATGTGCTAATGATGACAACTTTCAGCGGAATTCTTGACGTAAAGAAACGTTGGAAAAGAGGATTTCTGGATGTCGGAAGGTGTGCCGGCATAGTCTGCGTCGGGAAAGAGGTATTCCCGATGCAGGCTATGTCGACACGTAGTTCGGCGTCGGGAGTGGCTTTCCCGATGCCGTACCAACACGGCGTCGGGAAAGCCTCTCCCGACGCCTTTCTCCTAACGCCTTTCTCCTAA

Protein sequence

MVLEKELEQMKKSSVEIQLCCDVLMMTTFSGILDVKKRWKRGFLDVGRCAGIVCVGKEVFPMQAMSTRSSASGVAFPMPYQHGVGKASPDAFLLTPFS
Homology
BLAST of MELO3C031340.jh1 vs. NCBI nr
Match: KAA0049798.1 (zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa] >TYK23067.1 zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.4 bits (215), Expect = 6.57e-19
Identity = 52/99 (52.53%), Postives = 58/99 (58.59%), Query Frame = 0

Query: 4   EKELEQMKK-----SSVEIQLCCDVLMMTTFSGILDVKKRWKRGFLDVGRCAGIVCVGKE 63
           EKE+E   K       +E+Q      + +    I DVKKR KRGF DV  C GI C+G E
Sbjct: 62  EKEIELQVKLHEALERIEVQDRNHQALASQMERIPDVKKRRKRGFPDVEICVGIGCIGNE 121

Query: 64  VFPMQAMSTRSSASGVAFPMPYQHGVGKASPDAFLLTPF 97
           VFP Q MST   A   AFP  YQHGVGKASPDAFL T F
Sbjct: 122 VFPTQPMSTHILALREAFPTSYQHGVGKASPDAFLPTFF 160

BLAST of MELO3C031340.jh1 vs. NCBI nr
Match: KAA0058911.1 (trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 6.83e-12
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 1   MVLEKELEQMKKSSVEIQLCCDVLMMTTFSGILDVKKRWKRGFLDVG 47
           MVLEKELEQMKKSSVE QLCCDVLMMTTF+G    +K W   FL VG
Sbjct: 66  MVLEKELEQMKKSSVETQLCCDVLMMTTFNGSERNEKEWNTLFLAVG 112

BLAST of MELO3C031340.jh1 vs. NCBI nr
Match: KAA0051920.1 (tetraspanin-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 69.7 bits (169), Expect = 7.88e-12
Identity = 36/57 (63.16%), Postives = 36/57 (63.16%), Query Frame = 0

Query: 36  KKRWKRGFLDVGRCAGIVCVGKEVFPMQAMSTRSSASGVAFPMPYQHGVGKASPDAF 92
           KK  KRGF D GRCA IVC GKEVFP QAM TRSSASG AF        GK  P  F
Sbjct: 153 KKHRKRGFSDAGRCADIVCFGKEVFPTQAMPTRSSASGEAFQRCTNTASGKPLPTPF 209

BLAST of MELO3C031340.jh1 vs. NCBI nr
Match: KAA0032288.1 (trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa] >TYK13511.1 trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 1.83e-11
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 1   MVLEKELEQMKKSSVEIQLCCDVLMMTTFSGILDVKKRWKRGFLDVG 47
           MVLEKELEQMKKSSVE QLCCDVLMMTTFSG    +K W   FL +G
Sbjct: 96  MVLEKELEQMKKSSVETQLCCDVLMMTTFSGRERNEKEWNTLFLALG 142

BLAST of MELO3C031340.jh1 vs. NCBI nr
Match: TYK21553.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.86e-11
Identity = 38/66 (57.58%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 32  ILDVKKRWKRGFLDVGRCAGIVCVGKEVFPMQAMSTRSSASGVAFPMPYQHGVGKAS--- 91
           I DVKKR +R F D GRCAGI C+    F  QAM T + ASG AFP P  +GVGKAS   
Sbjct: 482 IPDVKKRRERVFPDAGRCAGIACIENASFSTQAMPTLTQASGEAFPTPRWYGVGKASLDV 541

Query: 92  -PDAFL 93
            PDA L
Sbjct: 542 LPDAIL 547

BLAST of MELO3C031340.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DH90 (Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00380 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.18e-19
Identity = 52/99 (52.53%), Postives = 58/99 (58.59%), Query Frame = 0

Query: 4   EKELEQMKK-----SSVEIQLCCDVLMMTTFSGILDVKKRWKRGFLDVGRCAGIVCVGKE 63
           EKE+E   K       +E+Q      + +    I DVKKR KRGF DV  C GI C+G E
Sbjct: 62  EKEIELQVKLHEALERIEVQDRNHQALASQMERIPDVKKRRKRGFPDVEICVGIGCIGNE 121

Query: 64  VFPMQAMSTRSSASGVAFPMPYQHGVGKASPDAFLLTPF 97
           VFP Q MST   A   AFP  YQHGVGKASPDAFL T F
Sbjct: 122 VFPTQPMSTHILALREAFPTSYQHGVGKASPDAFLPTFF 160

BLAST of MELO3C031340.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UZJ4 (Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00790 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.31e-12
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 1   MVLEKELEQMKKSSVEIQLCCDVLMMTTFSGILDVKKRWKRGFLDVG 47
           MVLEKELEQMKKSSVE QLCCDVLMMTTF+G    +K W   FL VG
Sbjct: 66  MVLEKELEQMKKSSVETQLCCDVLMMTTFNGSERNEKEWNTLFLAVG 112

BLAST of MELO3C031340.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U9S0 (Tetraspanin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003740 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.82e-12
Identity = 36/57 (63.16%), Postives = 36/57 (63.16%), Query Frame = 0

Query: 36  KKRWKRGFLDVGRCAGIVCVGKEVFPMQAMSTRSSASGVAFPMPYQHGVGKASPDAF 92
           KK  KRGF D GRCA IVC GKEVFP QAM TRSSASG AF        GK  P  F
Sbjct: 153 KKHRKRGFSDAGRCADIVCFGKEVFPTQAMPTRSSASGEAFQRCTNTASGKPLPTPF 209

BLAST of MELO3C031340.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SNW9 (Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold745G00070 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.85e-12
Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 0

Query: 1   MVLEKELEQMKKSSVEIQLCCDVLMMTTFSGILDVKKRWKRGFLDVG 47
           MVLEKELEQMKKSSVE QLCCDVLMMTTFSG    +K W   FL +G
Sbjct: 96  MVLEKELEQMKKSSVETQLCCDVLMMTTFSGRERNEKEWNTLFLALG 142

BLAST of MELO3C031340.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DDA9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00450 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 9.03e-12
Identity = 38/66 (57.58%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 32  ILDVKKRWKRGFLDVGRCAGIVCVGKEVFPMQAMSTRSSASGVAFPMPYQHGVGKAS--- 91
           I DVKKR +R F D GRCAGI C+    F  QAM T + ASG AFP P  +GVGKAS   
Sbjct: 482 IPDVKKRRERVFPDAGRCAGIACIENASFSTQAMPTLTQASGEAFPTPRWYGVGKASLDV 541

Query: 92  -PDAFL 93
            PDA L
Sbjct: 542 LPDAIL 547

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0049798.16.57e-1952.53zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa] >TYK23067.1 zin... [more]
KAA0058911.16.83e-1274.47trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa][more]
KAA0051920.17.88e-1263.16tetraspanin-3-like [Cucumis melo var. makuwa][more]
KAA0032288.11.83e-1174.47trans-resveratrol di-O-methyltransferase-like [Cucumis melo var. makuwa] >TYK135... [more]
TYK21553.11.86e-1157.58CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DH903.18e-1952.53Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7UZJ43.31e-1274.47Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7U9S03.82e-1263.16Tetraspanin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00... [more]
A0A5A7SNW98.85e-1274.47Trans-resveratrol di-O-methyltransferase-like OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3DDA99.03e-1257.58CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031340.jh1.t1MELO3C031340.jh1.t1mRNA