MELO3C031319 (gene) Melon (DHL92) v4

Overview
NameMELO3C031319
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTMV resistance protein N-like
Locationchr05: 25649806 .. 25650022 (+)
RNA-Seq ExpressionMELO3C031319
SyntenyMELO3C031319
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGACCCTCATGTCTTCACAAGTTCATGTCTTTATGGAATCTTGAATTAAGGAATTATAAGTTTCTTCAAAAAATTCCAAACCTTCCCCAAAACATACAAAATTTGGACGCCAGGGGTTGCAAATCGTTGGCTCGAAGTCCAGATAACATTGTGGATATAATATCAATAAAACAGGTTAGATTCTTTCCATTCATTTTGTTCCTATCTTACACGTAG

mRNA sequence

TTGACCCTCATGTCTTCACAAGTTCATGTCTTTATGGAATCTTGAATTAAGGAATTATAAGTTTCTTCAAAAAATTCCAAACCTTCCCCAAAACATACAAAATTTGGACGCCAGGGGTTGCAAATCGTTGGCTCGAAGTCCAGATAACATTGTGGATATAATATCAATAAAACAGGTTAGATTCTTTCCATTCATTTTGTTCCTATCTTACACGTAG

Coding sequence (CDS)

ATGTCTTTATGGAATCTTGAATTAAGGAATTATAAGTTTCTTCAAAAAATTCCAAACCTTCCCCAAAACATACAAAATTTGGACGCCAGGGGTTGCAAATCGTTGGCTCGAAGTCCAGATAACATTGTGGATATAATATCAATAAAACAGGTTAGATTCTTTCCATTCATTTTGTTCCTATCTTACACGTAG

Protein sequence

MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQVRFFPFILFLSYT
Homology
[Close]
BLAST of MELO3C031319 vs. NCBI nr
Match: KAA0047973.1 (TIR-NBS-LRR disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLEL+N KFLQ+IPNLPQNIQNLDA GCKSLARSPDNI+DIISIKQ
Sbjct: 1023 MSLWNLELKNCKFLQEIPNLPQNIQNLDASGCKSLARSPDNIMDIISIKQ 1072

[Close]
BLAST of MELO3C031319 vs. NCBI nr
Match: ADN33675.1 (TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo])

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLEL+N KFLQ+IPNLPQNIQNLDA GCKSLARSPDNI+DIISIKQ
Sbjct: 1023 MSLWNLELKNCKFLQEIPNLPQNIQNLDASGCKSLARSPDNIMDIISIKQ 1072

[Close]
BLAST of MELO3C031319 vs. NCBI nr
Match: XP_011648798.1 (TMV resistance protein N [Cucumis sativus] >KGN60871.1 hypothetical protein Csa_023462 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 3.3e-15
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSL NLELRN KFLQ+IPNLPQNI+NLDA GCKSLARSPDNIVDIISIKQ
Sbjct: 955  MSLSNLELRNCKFLQEIPNLPQNIRNLDASGCKSLARSPDNIVDIISIKQ 1004

[Close]
BLAST of MELO3C031319 vs. NCBI nr
Match: XP_008455151.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLELRN KFLQ+IPNLP+NIQ +DA GC+SLAR+PDNIVDIIS KQ
Sbjct: 980  MSLWNLELRNCKFLQEIPNLPENIQKMDASGCESLARNPDNIVDIISKKQ 1029

[Close]
BLAST of MELO3C031319 vs. NCBI nr
Match: KAA0063682.1 (TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLELRN KFLQ+IPNLP+NIQ +DA GC+SLAR+PDNIVDIIS KQ
Sbjct: 1105 MSLWNLELRNCKFLQEIPNLPENIQKMDASGCESLARNPDNIVDIISKKQ 1154

[Close]
BLAST of MELO3C031319 vs. ExPASy TrEMBL
Match: A0A5A7TWK7 (TIR-NBS-LRR disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00340 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.4e-17
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLEL+N KFLQ+IPNLPQNIQNLDA GCKSLARSPDNI+DIISIKQ
Sbjct: 1023 MSLWNLELKNCKFLQEIPNLPQNIQNLDASGCKSLARSPDNIMDIISIKQ 1072

[Close]
BLAST of MELO3C031319 vs. ExPASy TrEMBL
Match: E5GB33 (TIR-NBS-LRR disease resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.4e-17
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLEL+N KFLQ+IPNLPQNIQNLDA GCKSLARSPDNI+DIISIKQ
Sbjct: 1023 MSLWNLELKNCKFLQEIPNLPQNIQNLDASGCKSLARSPDNIMDIISIKQ 1072

[Close]
BLAST of MELO3C031319 vs. ExPASy TrEMBL
Match: A0A0A0LLL0 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020940 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSL NLELRN KFLQ+IPNLPQNI+NLDA GCKSLARSPDNIVDIISIKQ
Sbjct: 955  MSLSNLELRNCKFLQEIPNLPQNIRNLDASGCKSLARSPDNIVDIISIKQ 1004

[Close]
BLAST of MELO3C031319 vs. ExPASy TrEMBL
Match: A0A5D3D473 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00600 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLELRN KFLQ+IPNLP+NIQ +DA GC+SLAR+PDNIVDIIS KQ
Sbjct: 1105 MSLWNLELRNCKFLQEIPNLPENIQKMDASGCESLARNPDNIVDIISKKQ 1154

[Close]
BLAST of MELO3C031319 vs. ExPASy TrEMBL
Match: A0A5A7V617 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002010 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 1    MSLWNLELRNYKFLQKIPNLPQNIQNLDARGCKSLARSPDNIVDIISIKQ 51
            MSLWNLELRN KFLQ+IPNLP+NIQ +DA GC+SLAR+PDNIVDIIS KQ
Sbjct: 1105 MSLWNLELRNCKFLQEIPNLPENIQKMDASGCESLARNPDNIVDIISKKQ 1154

The following BLAST results are available for this feature:
BLAST of MELO3C031319 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047973.11.3e-1690.00TIR-NBS-LRR disease resistance protein [Cucumis melo var. makuwa][more]
ADN33675.11.3e-1690.00TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo][more]
XP_011648798.13.3e-1590.00TMV resistance protein N [Cucumis sativus] >KGN60871.1 hypothetical protein Csa_... [more]
XP_008455151.12.1e-1482.00PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
KAA0063682.12.1e-1482.00TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa][more]
BLAST of MELO3C031319 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031319 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TWK76.4e-1790.00TIR-NBS-LRR disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
E5GB336.4e-1790.00TIR-NBS-LRR disease resistance protein OS=Cucumis melo subsp. melo OX=412675 PE=... [more]
A0A0A0LLL01.6e-1590.00TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020940 PE=4 SV... [more]
A0A5D3D4731.0e-1482.00TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7V6171.0e-1482.00TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of MELO3C031319 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031319.1MELO3C031319.1mRNA