MELO3C031290.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031290.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionReverse transcriptase
Locationchr05: 8332409 .. 8346152 (+)
RNA-Seq ExpressionMELO3C031290.jh1
SyntenyMELO3C031290.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTATGATATTTCCATTGACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGGATACCGTGTACACAGGTTACGTTTCGTTGTTGACGTTGAATGTACTCCGTGACAACGATACTATCGTGAGTGCTGGTCGAGTCCCACTACGACAAAGACAATGGGAGTGTTGGGCGAGCCCCACTACATCGTAGAACTATTAAACGTTGGTTGTACTGGATATACCCAACACAATGTAATGAAGTCATGTTAGTTAAATAGTTTATAAACAGGAAATGTCTTGCTAGATTTTATAGATATACATATTGAATGTTTGAATGAGCTGTTTTATGAAAATATTTACAGTTAACTCTTTGCTTGTTAGATTTATAAGTTTTCAAAGATTATCATGAGTTCTTATTTACAGTTTTAAAGTAATGTCACTCACTGGGCTTTATAGCTTACTCTTCTAAAATGTTTTACCCACTTTCTAGGTAGAGATTGAGTTCCCGGTGCCTAATAGACTGCCTTAGTCTACTGCAGCTCCAATATCGATTGTCAGTGCGTGGTTAGAGTTGTGCATAGAGCCTGTTGTGTTACGATGTATATATCTATGTATGATATAGATATTCTACAGTTTGTATAAGCTTTAGGAGCTGCGGTTGTGCAAACCTTTGTTGGTTATGTTTTGGTTAAGGTGTCTCCAGATTTACTTGCGAAATCAGTTATTTTTGGGCTACACTTCATGTATGTATATGATTAGTCTAGGTTTTGCTGTGTTGTGTTGCATGTATAATAGTTTATATACTAGATTAGCAACTTTATCACGTTAAAGAATTCAACAGAGTCGACAGATATCGATAGAGAAAAGTGTTGTCGGTCGGCTTCACGCCGTCTTTCGATCTAAGCTACCAGGTAGTCCGGGAGGGGGTGTGACATTCTAGGTTGTGACTTTTTTTTAGTACATCACAGTGTTTTTAAAGGCTCAAGACGCTCTAAGGCGCAATGGTTCTCTAGGGCCTAGGCGCAAGGCGCACAAAAAAGCACGGGCTTTTTTTTCATGAGGCGCACTATATATATATATACAAAATTGAAAGGACGAACAATGTATAAAATATAAGTAAATAACCAATGTAGAAATGAGATTTAACTCTAATGTATAAAATATTATAATATTAGTTTTCTATCCAAAAAACAAAACACAATAGAAAACTAGTCAGAATTCAACAACAATCAAAATAAAAGTTCATTCCTAAAGATCAAACTCATCATCACTAAATTGATCCTCATCTTCATTCACTCATTCGTTGGACTTATAGCCATCGGTATCTTCTTCCTGATCAGAGTCATCCAAATTTATTTGTTTGGGTGTGGGTTGTGTGGTAGACGAGGATGAACATGAAACATTAGTCGCTCCTGAGGCCCTAGCTTTAGAATAGAAGGTTGGTTCTTTTGCTCCGACAGCTCTTGAAACATCACCCCACGTTAAAGTATCATCGTCAAATACCAGCTCATCCTCTTCCTCAGAATCATCATCCAATCTTCCAATCAACCATTCGTTACTATCATCAATATCTCTTAAAGAGATGGGATCGGCGATATCTCGAAGGTTGTATCGACGTTTTAATGCTCTATTGTATTTGATGAACACTAAATCATTCAAACGACTTTGAGCAAGCCTTTTTCGTTTCTTGCTATGAAGCTACAAAATTAGAAAATTTCATTGTCACTGCCAGTGAATCAACAAAATTACATTTGCATGTAAAGGAGAGGAAAGCTAACATGCTCAAACACACTCCAATTACGTTTGCATCCAGAAGCACTACAAGTAAGACCTAAAATTCTCATAGGAAACTTTTGCAAGTTTGGAGTTGATTGTCCAAAATTATCTCACCATTCCACTATAGGCAAAATATATATATTAATAACATAATTATTTTTGAGTAATCGACTAATCGGTTAGTTGAAATTTACCTGGAGATATTTTGTCCCTTTGTCTGATTGCTAAAGGTTGTCCAAACAATGCTTCAGCTCTCTTATACTTGCTTAGTTCTGCAAGTATTTTGTCTTGGACGTCTAATGAAGCTACCATTTTTGTTATGCATGAGTAGAGCCCGTTAACTATTTCATCATCCTCTTGGATGCTAGGATTCGAATAATAGAATGACGGGTTTAAATAATACCCCGCTACATGCAGAGGACGATGCAACTGAAGCTCCCATCTTCTATCAATTATGGCGAAAATGTCCTTGTATTTTTCTTCATTATTATTGAACGACTTAGCAATAGCTTCTTCAGCTCTATCCATGGCCTCATAAATATATCCCATAGGTGGCTTCTTTTCGCCATCAACCAATCTAAGAACTCGAACTAGTGGGCCAGATACTTTAAGAGCAAACACAATTGTAGTCCAAAAACTAGCCAACAAAATAATCTGAACTACTCGCCTTCCTTGTTGCTCCTTGCTCCATTTGCTATTCTTCCATTCATCTGAAGTAAACATCTTCCTTAAGTTGTTCTTTTGATGATGTATACTCGATAATGTAATGCAAGCAGTAGCTAAGCGAGTCTTAGCTGGTCTAACTAACTCCTTTTGGTTAGTAAATCGTCCCATCATTATTAATAATCTAGGACGAACATAGATGAAGTTGCTAATCTCCATGCCTCTTTTCAATGCTTTGCGAATATTGGAGATCTTGTATATATCCTCCAACATCAAATCTATGCAATGAGCAGCACATGGAGACCATATTAATTGTGGTCGCTTTGCTTCTATTAATCTCCCTATTAACAAAGAAAATAAGTATACATTTAGCATAGAACTCACTAAATCTAACAATCTTCCTGTTAACATAATAGTTTACATTCTTACCTGCCATCACATTTGTTGAGGCACTATCAGTAACTACTTGTACAACATTTGCTTCTCCAATGCGCTCTACAAAATTGTCAAGTAGCTCGAACATCTTCTTTCCATCCTTCACATAAGATGAAGCATCGATGGACTCAATAAACATGGTGCCCTTAGGACTATTAACTAAAAAGTTAATCAATGTCCTATTTCTTCTATTGGTCCACCCATCAGCCATAACAGTGCATCCAACCTTAGCCCACTCTGCTTTATGGCTCCTCATCAACTCATTTGTTGCTTCTAATTTCTTCTTCAAACATGAGACTCTCAACTCATGATATGTTGGTGGTTTCAATCCAGGACCAAATTTCTCAATTGACTCAATCATAGGGATAAAACTATCATATGTGCAAGCATTCAAAGACACTTCTGCATCATAAAACCATCGAGCAATTCTTTGGATGGTGTGCTCCCTCATTTCCTTCTTGTACGCCGCATTCAACGAAGTTTGTTTTCCTTTGTCGTTCTTTCTATTTTGAACCACAGTTTCTGGATTGGGAGTAAAAAATGCATCCATTGGACCCTTTTGTCTTGGCTTCTTCAAGCTCGAGCCACTTGATGTTGCTCTGTTATTTACACTAATACTCCCTTCATCTTCATCCTCGATACCATAATCTTGTACATCAATGTCCACAATCAAATTTCTTTGTTCTTTGATCTGCTTTTTCTTGGACATGTAATCTTTAATTTCTTCCTTCACATGATCCGAACATTTTCTACAAGCTGTGACATTTCTATAACCACCAACGAGGTGTTGTTTCAATCGATACACCCCTCCTTTTGTTACTTTCGAACAAAATCCACAGACAAACGTATTTATATCTTGGTCATTTTGCAATCGACCATATTTCCATGCTGGATCTTTTTTAGAACTTTCATCAGCCATGTTTTTACTTCTTTGTCTTCTCTTCTCCTTTGTTTTTGCACCAAAAAACAAAGTAATGGCAGCAGCAACACCGAAGATTTTTTTTAATAAGATTGGATGGAAAAAGAAAAAGAAGCACCAAAAAACAGAGTAATGGCAGCACAGCAGCAGCACCAAAGGATTTTTTTTTAATAAGAATAAGATTGGATGGAAAAAGAAGAAGAAGAAGAAGAAGGTGGTCCACTCGGTACCGGTGGCCCTTGCCGGCACCACCGCTGATGACAAAATTTCCGCAGAAAGGGACGGAAATTCTATAGAAAGGAATGACAGTCGAGGAACGGTCGTTTCGTTGTCAGCCGCAGAGAGGGTCTTCAAGTCGAGCCGTCGTTTCGTTTCTTCACACCCAAGTTACACGTAATAGGTAAATATATTAAGTAAAAGTTAAAACGGTATAAATTTTTTTGTTTTTTCTTTATTACACCCCAGCCCACATAATAAAGCCCGCGCTTATGGGCTTTTTGCGCCTACTGCGCCTGGAGGAAGGTGCGCGCCTCAGCCGCGCCTCTTCATCGTAGCCTCGTCTCTCCACAAATAAGCGCGAGGGATGCGCCTTGCGCCTAGGCGCGTGCCTCAGCGCGCCTTTTAAAACACTGGTACATCATATTAGGATTCACCATGTATGATTGAGTGATTAGGATTTTGCTTGACCAATTTGAAATGAAGTAGTCAAAAGTCTCCTCTTGTGCTCGTGAAATTTTCTTTCCACATATACACACTTTATGGGGCTTGATTGATTAGGCATAGTTCAAAGAAGCTTCTTTCATAGTTCAAGAATTCAATTTAAGCTTCTTTGAACTAAACAATTTTGCGGCAATTGAATTGCATAAATTAATTTCACCGATGTCTTATTGGTTAGTGCATTATCGTTCTTGCATGCATTCTAATTCAACTAATGCACACAAATGTCAAAGGGCGATTTCTTTTATCTAGCCTGTTGTATTTTTCCGGTATGGTATGAATATGAGTGTAGTCTTGGAAGTTGATTACAAACTATAGTTATGGTTGTTTTTTTATCTACAAAGTTGATTTTTATTAGTTTTATTCTCTTTTTTATGTTTTTCTAGGTATTGGTACCGGTCTTTATTGAGTTCTTTGGTTTTTTTGGACAGTTAATAGTCTTGATGGAAACTAGAACATTGTTGGAAAATTTGGTAGTTTCTTTGGGAAATTGCCAAAAATAGCTTAAAAAAGGAGGGTTAAATGACTTTTGGGATAGTTTTTGAAAATAAAGAGTTTTAAGACAATTTATGTGTGAATGGACAAAAATGTCCTTCATTAAATTTCTCCTTCTCCTTCCCTTTCCCTTTCCCTTTCCCTTCTCTTCCACGTAAAAACTTTCAGCTTTCGCTTTCCCTTCTCTTTCGCGTAGAGTTGTTTCCTTTTCCCTTCTCTTTTGTGTAGAACACCTGAAGTAAAAAAAAAAAAAATATCGCTCTGCTCCGATACTTTGCTCTGCTCTAGTGTCGTTCGAAGATACTCCGAACATTCGTCTCTTGTCGTTCGTCGATCCTCTAGTGCATTTCGTCGCTCCTTCTTTTCAAACCATTCAATCAACTTTGAGCGTTTTCTCTTATTTCGGTGAGTTTCATCTCTAACCCATTTTTAATTTATTTGCTATAAATATTTGGTTTAGGTATTTGTTGCGAGTTTCATCCGTAAATGTCTGGTTTAGGCTATTTTGGAATGGAATTATTTGCTGTAAATTAGTTTAGTCAAAGTTTGGTTTAGGTTCTTAAAAAGTTCAATGGGTAGTGAAAAATGAATTGAAGTAAAAGATTTAGTTTGCAAGAGTACACTTGCAAGGAGTTTCAAGTTGAGCAACTACCATGCTCACATGTCATTGCTGCAGCACGAGATCGCAATATAAATGTTCATAGATTATGTGCTAATTATTACACCAATGAATGTTTGTTGGCAGCATATGCGGAGGTCGTCTACCTAATTGTAAATCAGTTAGCTTGGAAGACAAGCGAAGACTATCTACATATGATTGTTTTACCTCCGAAAGTAGTCAAAAGAGTTGGTCGACCGAAGAAAAAAAGGATTCCAAGTGTTGGTGAAGCTCCGAAATTGCATAAGTGTGGTCGATGTAAAGAAATAGGTCACAACAGATTAACGTGTACCAATACAATTTCATATACCGAGAAGTCCAGCATACAAATTTAAAAATTTCTCTACCAATGTACTAATTATTACACTAATTAATGAATGTTACTTTTCTTTTAGTTTGTTATTTATCTATCTGGATGTGTTTTCTTAATGATGTCTTCAAACATTCTTACTTTATGTGCTTCTAGATAGATGAAGAAGACGAAAATAACAACTGGCTTATTCATTTAGGAACACAAAAAACACAAACGTATTGACACAGATTTTAATTTGTTTAATAAACAAACTCGTTAAACGATCGTTTAAAGTAACTAAACGATCGTTTAATGTAACTAAAAGATCGTTTAACGTAACTAAACGATCGTTTAAAATAACTAAACGATCGTTTATATATTTCACACTACTATTCGTTTAGTTTGTAATTCTTTAATTTATATATTTTTTAATTCTTTGCTACTCAACTGCTTTAATTTATATATTAAGCGATCGTTTATATGTAATCACACTAATGTAAAAGATCGTGCATATATCTTTAAGCGATCGTTTAGTAAAGTTTAAACGATTTTCTTAATAAACATAAAAAATATTAAGCGATCGTTTACCTACAAGTAGTTTTGCAAACAAATATGATATTTGAATGTCATCAATTGACCATTCATAAACTACGTTTATTCTAATTTATATAGCATCTATACTTGTGCATTATAGAGAAGAATCGATACATATTTTGCAACATACATGATATACAACTCCTACAAATCTCGCAACAAAGTTCAATACATAGGAGTGTTGGTCCATAATTGAAATGCCAATTGTTTTCTAAAGTAGGACATGTTTTCTTGACATAATGTATCTAAATCAAAACCACCAGCTATGTACTCAAAATACTTAATGGTGAATACGCCACAATCACTATTATTTCGTTGTAGTGGAATGGAGTCGACAATGACAATTGGCCAAGGATGGGAAGGATTAATCTTGTACGTGGGTTCATCAGTCGATGTCGATGTCATAATTGAAGCCTGAACAAAAAGGAACAAATGAAATAATAATTGCATAAGAGACTGACTAAACATGTCATAACAGCATGGTGAAAGTTAAAATAAATAGTGAAAGTTTGGAAGGTGCGAGATACATGCGAGATAAACCACGAGGGCCTAAGAGACTTACTAAACATCAATAGAATCACTCCAAATGGATTAGCAGGGGTACCAATTTCATTTCGAAATAAATAGTGAAAGTTTGAAATGTGCGAGATACGTGCGAGATAAACCATGAGGGCCTAAGAGACTTACTAAACATCAATAGAATCACTCCAAATGGATTAGCAGGGGTACCAATTTCATTTCGAAATAAATAGTGAAAGTTTGGAATGTGTGAGACGTGTGCGAGATACGTGCGAGATACGTGCAAGATAAACCATGAAGGCCTAAGAGACTTACTAAACATGCATAGAATCACTCTAAATGGATTATGAGGTGTACTAATTTGATTTTAAAATAAATAGTGAAAGTTTGGAAGGTGCGAGATATGTGCGAGATAAACCATGAGGGGCTAATACAAACTAAACATGCATAGAACAATACAAACTAATGCATATAAACATGCATAGAATCACTCCAAATGGATTAAAGTGAAAGTGATCAAAGTGAGAGCCAGAGTGGTTTGAGAAGCATCCATAGCGGCATGAAATTGCTCACAATATAAGACAATAATACACAATAGATAGAAAGCAATGTAGATAAAAAAAACTCACTGCAAAATAAAAGAGCTTTAATTGCACTTCTGAGAGGTAGCCAATTCAGATTTAAAGAAGGGATCCCAAGAAAAAGAAGCAAAATGCCAACTATATTTAACTTCAATTCATTTCACTACCCATTTAACTTTCTAAGAACCTAAACCAAACTTTAAAGTTCTGACGTTTTGGATTAAATTAAAACAAATTGAATATAAATTAAAATAAATTAAGAAATATACAAACACAAATTAAAAAAATAGAATTAAAATTAATAATACGAAAATATAGTTCACTACAATAAATATAGTTCTCAAAATAGAAAAAACATAAACATAAGAAAAAGTCTTCCAACGAGGTGCGTATGCGCGTCATTCTACACCTTTGAGTAGCCTGGTCGTCTACCCAACACCTGATCGCATATCTCATCCTCAGAGAGTGGCTGACTACCCTCTGGGGTAGGCTGGGATTGGAGTTCCAGCATTTGATTCTGCAACAAATTTAAAAACTATGTTAGGTAACGCGCAAAAATATATAATGAAAGTGGATAATTAATAAGGGCATAACTTACATGCGCATCCTCGGCGGCCTGCGACACGAATGTCCCAGCTCGAACGTGTGTTTTCCGAAACAATTCCACACGATCGACCGTCTCCCCTTTTCTTTCAGCGAGCTCATACTGTCGTTGTAGAAACAACTTGGACCCGCTACTATGATTGTAAGGCTGCTTCTGTCTAGCAGCCTTGTTCGTCCGTGATTGCTCCTGCATTAAAACAATTATATTGTTTATTTCGTATACATATTAAAACTTGTTATCATAATTAATCATGACAAATACCTGGAATGCACGACTGATATAATGGTCGCAGAGGAAGTGCCAATCCTCATCACGTCTAACCAATGCGTTTGGTGGGTTGGCACGAGCCTCCTCCGGGTCGCTGTACTTTTTGAAATATCTATGACAGTCAGCCCGGAACTCTTTAAAGGTCGTGAGCATTTGATGCTCAACAAACCTGTTCATCGCTTGATCATTGAAATCAAGCACAAACAATCGCTACACATTACAAACATAACACATTAGATTGGTTAAAGTTAGATATGTTTCAAATGAAATCATATATAAATGTGTAGTGCATTTAATTACCTGGAGGTCGCCCTTGACGACCTCAATGTATTCTCTCCCAACGTCCTCCCACTTAAGACAGCGGACGGGAAATGTCTTTCGCACGCACACGCCTATTGCCTGGCTGAAGCGAACGGCGTGTGGAGAAATAGGCTTCTCCGCTCCAAGGGCGATCGTCATCGGAATGCGCCCATTTATTGCAACATGGCGCTCTAACTCCAAGAGTCGAGACTGCGCACGTCTCCTAGGAGTCGGAGTCGCTTGTTGAGAAGAAGACTCTGCTCAATAAATCGATAATAACATATAAAGTTAGAAAAAAGAACATGAAATATTTGTAAGTTAAAATGAAGAAAATTCTTAGACTCACCCGTATTGTCGCCCACAGATGATGACCCTCCCACGATGTTATTATCTAAATCGTCCTTAAACTGGAGGAACATATCGTCCGTCTCCATAAAATTTGATCGTCGATATGACATAATGGCTATGGACATAGAAAACAAACATTTTCAATTTAACTTAAACCTCCCTCTCCCCAGATAAGTAGTAATTCCATTTCATAATAATTATTGTTGTAGTTGTTGTTGAAAATGAAATAGAGAGCATTTTGGACAAATTATATCTTGGCTTCTAGTTTATTATTGAATTGAATAATGGAAGGATATCAAAAAGAAGTTTATATTATACATAAAGAAACAAAATGATAGAATGAGCATGAAGACACTTTTTGTTGGCATGACAAAGATATATATAATAGGGTCTCAATAAATGAAGACACTATATCTATATATATATATATATATCTATCTATATATATATATATATATATATATATATATATATATATATATATATATCTATCTATCTATATATATATATATATATATTCAAATTGGAATTGAAATTCAAATTCATATTCGTATGCATATTTAAATTCAAATTCAAAATTCAAATTAAATCTTTATCTCAAAATCAATTTTAAATTCAAATTAAATCACAATCTCAAATTCAATAAACACCCCCCAATTCAATATAACCTCAAAAATCTCTACACATTCAAATTTTTTATCAATATCAAATTCAATTTCAACTTTAATCTCAACGTCAATCTTAAATCCTAAAACCACTTCAAATTCAAATTCAACACTAAAACCTAAAACTAATTCAAAATCTATATCCTAAAACTATTTCAAAATCTAAATTCTAAAACTAATCCTAAAACTAATTAACTAAAGCAAAACTAAAACAAAAACAAAAAAGAACTTTAAACAATTTCAATAAACTCTATCTAGCAAACAATTTGAATATACGTTAATTTAATACATACATTTTTTTAACTTTGAAACAAAAAAAGAAAAAAACAAACAAACATTTATTGAGACCGGTGGTGGCCAAATAGGACGAGGAGGGGAGGACGATGGAGAAAAATTACAAATGGATAAATCAATCAACAAAAATCTAAATTTAAACTAAATAAAATTTAAACTTCCACTTACCTAAAGTGGCAGACGGCGGCAAGGGACGACGGCGAGCGACGGCGGCAGAACACGGAACGGGGACGCGATTCTCTCTTCTCCCCTCTCGGCTTCTCCTCTCGTTTTCTCTCTCGGTTTCGGTTCTGTAAATTACAGAACTGAAACGATTAAAAAGGGGATTTCCCGACGCAGTGCCGTGGCGTCGGGAAATCCCCCTAAAAGCGTCGGGACAAGGGGCATTCTCGACGCTCTTTAAACGGTTTTCCCGACGCCTAATAGTGCGTCGGGAAAAATCCCTTTTCCCGACGCCGTTTCCGACGCACTGTGCACGGCGTCGGGAATAGTTTGTTTTTAAAATTTAATTTACCCTTCTCCCGACGAATCCTTGCCGACGCTTTCTTGGTGCGTCGGGAAATAGTGTTTTCCTGACGCATTGCCCGACGCGGTGTTCACGGCGTCGGGAAAACCCTTATTCCCGACGTTTCTTATGTCGACGTCGTTTTCTGCGTCGGGAATAATCCATTTTCTTGTAGTGTTTGACTAAACTAATTTCCAGCAAATAAGTCGATTCCAAAAAAGCCTAAACCAGATGGATGAAACTCACAACAAATACCTAAACCAAACATTTACAGCAAATAAATTAAAAATGGGTTAGAGATAAAACTCACCGAAATAAGAGAAAAGGCTCAAAGTTGATTTAATGGTTCGAAAAGGAGAAGCAACGAAATGCAATGGAGGACCAATGAACGGCAAGTGATGAACGATCGAAGTATCTTCGAAGAGCAGAGTGTAGGAATAGAGCGGGAAATTTCAAAAGCCAACAAAAGGCGATTTTTTTTTTTTTTTTTACTTGAGGTGTTCTACGCGAAAGAGAAGGGAAAGAGAAACAACTGTACGCGAAAGAGAAGGGAAAGCCAAAGCTGAAAGTTTTTACGTAGAAGAGAAGGGAAAGGGAAAGAGAAATTTAATGAAGGACATTTTTGTACATTCACACCTAAATTGTCCTAAAACTCTTTATTTTCAAAAACTATCCCAAAAGTCATTTAACCCTCCTTTTTTAAGTTATTTTTGGCAATTTCCCTAGTTTTTTGTATAACTAAGTTAAGTTGGTTCTCTTTGTTCTCTGGCTATGAGTATTATTTGAAGCATGTTTTGTATAGCTAAGTTGGTTCTTTTTCTTATATATATATATCACACTTTCAAACAAACCAATCAATCAATAACACTTAATCATTGATAAACTTCTATTAGGATCTATTAGTATCTATCTAGGCAATAAAAAGGTAAAAAATCTTTCTATAACAGGTAAATAGTTTAGCCTATTTTTCTATATTTAAAAAGCTCCTAATAAATATATATCAAATGAATTTTGAACAAGATACTCAATTTAAACAATATTTCCAAGATGTCAAGGAGAAAAATTTGGGAAACCTACTTTGATTTTTTTTTCAAGATATACCTACTTTAGAATTCTTTTTATCCATTGTAATGTTTATGATCTTCTCATTGTTCAGATTCACATTTCTATTGGAACCGACATTCTCTACCGTGAAGATTTTACCGATGGTTTCGAGGTATAATTGCTATGTTTTAACTTCCTCGTGCTTCATAATCTAACTGGAATTTTCTTTCAAGCAGCATAAAGAGTATTTTCGAGTTTTGACTTGTTCTGAGTGAAATGTTATTTCCTGCTTTCACGATCCATTTTCCTTGTAATTCCATCTGGATACAGTAGGATTTGATTGATTATATTTTCATTTGTTATATCAGAGTTTTCCACACTTTTTAGCTCACAAATATTTTGATGGATCCTTACTGTTGGTGATGTTGCGTGCTTGACCTCCACTGTTTTCTTTCAGTGTCTGCAGAAAATGCTTGTTGAATTGTTTTTGATGAGATGGAATCCAGATGCAATAGATTTGAATAGCTAAAGCCAAAATTCAGATAAACTAATTAACCACAACTCTAATTACTTCACTGATAAAATATATAATAAAATATTTTACTGCATCATTCTCCCCAATTTTTAAGAGAACTCATTCAAGGGGATCGTTAGCGTTCATCAAAGTGGCTATGAGAGTGGTTCTCTCCCTTGTTAGTTCAATATGGTACTGGGGACGACTTTTTCACCTTTTATGGCTCTTTATGCTATCTATTTAAACCTGCTGCACCATAATTTTTTAAGGGAGTACATTTTAGATTATTTGTTTTTATATATTATTATTATCTTCTAGATTTGACACAGGTAATGACCATAGCTTGACATTCCTAAAAAAATGAGATCAAGTCGTTTCGATGGTTTCCGAAGTCTAGACAACGATGTCTTATTTTTTTTCTTTTTGTTGTTTTGTTCTTAATTTTGTTTCCTTTCATTTTTGCCTGTTGTTGTGACGAAAAAACATTTAAATATGCTTGTTTCTTCAACCCTGGCTCTACCATATGGCCATAGCTTGACTCTTTTAGAAAAATGAGGTCAAGTCCTCTCTATTGTTTCTGAAGTCTGAAAAGTGGTATGCTTCTATTTCTTCTATTTCCTGTCCTATTCTTAACTCGTTTCCTTTCGTTTTTGTCCCTCACGTATTATTTAAATCAATTTAAGGAGTTGTTCTCGTTGGTTGATTTATAGGTTATGTTGTTTGAATTCAAATGATTATCATATCCGATAGTAATAATTGAAGATATACGTTGATTTTTTTTATTTTTTTGCAAATGAACTCAATTTCATGGTTGATCTGTATGTAATTTTTCATCTCATTTCACTTTCTTCTTTTTCTTTTCTACAATTTTGATCTAGTTTTGCTTCTTTTGACTTTGATTATTTCACGTGGTCACATTGTTGATTGATCCTATGTCTCTTCCATTACTCTGATTTGCTTGTTTTTAATGGAAGGTTTAGAAAGACTAAATCGAAGCTTATATTTGCAACACCTGTATACTATGCCTATACTTATGTTTATGCTTATGTAGTCAGTGGTTTTTTTTTTTTTTTTGCATTCCTTGTGGGTTTTTTATTAAAAACCTTGGGTGCTTATTTTGAAAAGTTCATAATCTTCTTATTAAAAAGGTTATTTATATTTAGTACTTAATGTTTATGCTTATGCTTATGCATTTAATTTCTATAATGAAAGTTGACTAAGGTTCATTTTCTTCAAATTTGCAGTTAGTTGAAGAATCCATGGACCATGGTATCGATCAAGTTCATTTATGCGTCAATTTGATTAGATTAGGTCACACATACATGTAATATTACAGTTAATTAATCTTTTTGATTTTTGTAAAACCTTTACCGACAATGTAATTTACATTTTTTATTATCTATATAAATATCTTTCTAAACATATGTGGTAATATTGAAATTTAATATTAAATTTTTTTGAAGGAATATATGAAAGAAAAATATGTGTTGCGAAAATGAAGAATACCGACACCAAACATGTGTCAACATATAAGTCTTTATTAAACAGAAACAATGTCGTCAAAACACATTTC

mRNA sequence

ATGCTTTATGATATTTCCATTGACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGGATACCGTGTACACAGGTTACGTTTCGTTGTTGACGTTGAATGTACTCCGTGACAACGATACTATCGTGAGTGCTGGTCGAGTCCCACTACGACAAAGACAATGGGAGTGTTGGGCGAGCCCCACTACATCATTGGATGGAAAAAGAAAAAGAAGCACCAAAAAACAGAGTAATGGCAGCACAGCAGCAGCACCAAAGGATTTTTTTTTAATAAGAATAAGATTGGATGGAAAAAGAAGAAGAAGAAGAAGAAGGTGGTCCACTCGGTACCGGTGGCCCTTGCCGGCACCACCGCTGATGACAAAATTTCCGCAGAAAGGGACGGAAATTCTATAGAAAGGAATGACACCCACATAATAAAGCCCGCGCTTATGGGCTTTTTGCGCCTACTGCGCCTGGAGGAAGGTATTGGTACCGGTCTTTATTGAGTTCTTTGATTCACATTTCTATTGGAACCGACATTCTCTACCGTGAAGATTTTACCGATGGTTTCGAGTTAGTTGAAGAATCCATGGACCATGGTATCGATCAAGTTCATTTATGCGTCAATTTGATTAGATTAGGTCACACATACATGTAATATTACAGTTAATTAATCTTTTTGATTTTTGTAAAACCTTTACCGACAATGTAATTTACATTTTTTATTATCTATATAAATATCTTTCTAAACATATGTGGTAATATTGAAATTTAATATTAAATTTTTTTGAAGGAATATATGAAAGAAAAATATGTGTTGCGAAAATGAAGAATACCGACACCAAACATGTGTCAACATATAAGTCTTTATTAAACAGAAACAATGTCGTCAAAACACATTTC

Coding sequence (CDS)

ATGCTTTATGATATTTCCATTGACTACATGACTGAGATCTTGAGCCTGAGGCTAGAGGATACCGTGTACACAGGTTACGTTTCGTTGTTGACGTTGAATGTACTCCGTGACAACGATACTATCGTGAGTGCTGGTCGAGTCCCACTACGACAAAGACAATGGGAGTGTTGGGCGAGCCCCACTACATCATTGGATGGAAAAAGAAAAAGAAGCACCAAAAAACAGAGTAATGGCAGCACAGCAGCAGCACCAAAGGATTTTTTTTTAATAAGAATAAGATTGGATGGAAAAAGAAGAAGAAGAAGAAGAAGGTGGTCCACTCGGTACCGGTGGCCCTTGCCGGCACCACCGCTGATGACAAAATTTCCGCAGAAAGGGACGGAAATTCTATAG

Protein sequence

MLYDISIDYMTEILSLRLEDTVYTGYVSLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTSLDGKRKRSTKKQSNGSTAAAPKDFFLIRIRLDGKRRRRRRRWSTRYRWPLPAPPLMTKFPQKGTEIL
Homology
[Close]
BLAST of MELO3C031290.jh1 vs. NCBI nr
Match: KAA0033241.1 (hypothetical protein E6C27_scaffold845G00350 [Cucumis melo var. makuwa] >TYK20418.1 hypothetical protein E5676_scaffold590G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 2.89e-34
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MLYDISIDYMTEILSLRLEDTVYTGYVSLLTLNVLRDNDTIVSAGRVPLRQRQWECWASP 60
          MLYDISIDYMTEILSLRLEDTVYTGYVSLLTLNVLRDND IVSAGRVPLRQRQWECWASP
Sbjct: 7  MLYDISIDYMTEILSLRLEDTVYTGYVSLLTLNVLRDNDAIVSAGRVPLRQRQWECWASP 66

Query: 61 TTS 63
          TTS
Sbjct: 67 TTS 69

[Close]
BLAST of MELO3C031290.jh1 vs. NCBI nr
Match: TYK27262.1 (hypothetical protein E5676_scaffold244G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 2.35e-12
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 5   ISIDYMTEILSLRLEDTVYTGYV-SLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTS 63
           IS DYMTEILSL L  TV T  + SL TL+VLR+ND  VSAGR+PLRQR+WEC   PTTS
Sbjct: 237 ISTDYMTEILSLSLYGTVCTQVIFSLSTLSVLRNNDAAVSAGRIPLRQRRWECRTGPTTS 296

[Close]
BLAST of MELO3C031290.jh1 vs. NCBI nr
Match: KAA0040296.1 (hypothetical protein E6C27_scaffold2379G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 2.29e-06
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0 

Query: 28  SLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTS 63
           SL TL+VLR+ND  VSAGRVPLRQR+WEC   PTTS
Sbjct: 202 SLSTLSVLRNNDAAVSAGRVPLRQRRWECRTGPTTS 237

[Close]
BLAST of MELO3C031290.jh1 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 3.21e-06
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 14  LSLRLEDTVYTGYVSLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTSL 64
           LSL+ E+   T    L TL+VL DND +VSAG+ PLRQR+WEC   PTTS 
Sbjct: 88  LSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTTSF 138

[Close]
BLAST of MELO3C031290.jh1 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 3.21e-06
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 14  LSLRLEDTVYTGYVSLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTSL 64
           LSL+ E+   T    L TL+VL DND +VSAG+ PLRQR+WEC   PTTS 
Sbjct: 88  LSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTTSF 138

[Close]
BLAST of MELO3C031290.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SUV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold590G00130 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 1.40e-34
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MLYDISIDYMTEILSLRLEDTVYTGYVSLLTLNVLRDNDTIVSAGRVPLRQRQWECWASP 60
          MLYDISIDYMTEILSLRLEDTVYTGYVSLLTLNVLRDND IVSAGRVPLRQRQWECWASP
Sbjct: 7  MLYDISIDYMTEILSLRLEDTVYTGYVSLLTLNVLRDNDAIVSAGRVPLRQRQWECWASP 66

Query: 61 TTS 63
          TTS
Sbjct: 67 TTS 69

[Close]
BLAST of MELO3C031290.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DUS7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00290 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.14e-12
Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 5   ISIDYMTEILSLRLEDTVYTGYV-SLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTS 63
           IS DYMTEILSL L  TV T  + SL TL+VLR+ND  VSAGR+PLRQR+WEC   PTTS
Sbjct: 237 ISTDYMTEILSLSLYGTVCTQVIFSLSTLSVLRNNDAAVSAGRIPLRQRRWECRTGPTTS 296

[Close]
BLAST of MELO3C031290.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TDY3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2379G00310 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.11e-06
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0 

Query: 28  SLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTS 63
           SL TL+VLR+ND  VSAGRVPLRQR+WEC   PTTS
Sbjct: 202 SLSTLSVLRNNDAAVSAGRVPLRQRRWECRTGPTTS 237

[Close]
BLAST of MELO3C031290.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.55e-06
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 14  LSLRLEDTVYTGYVSLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTSL 64
           LSL+ E+   T    L TL+VL DND +VSAG+ PLRQR+WEC   PTTS 
Sbjct: 88  LSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTTSF 138

[Close]
BLAST of MELO3C031290.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.55e-06
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 14  LSLRLEDTVYTGYVSLLTLNVLRDNDTIVSAGRVPLRQRQWECWASPTTSL 64
           LSL+ E+   T    L TL+VL DND +VSAG+ PLRQR+WEC   PTTS 
Sbjct: 88  LSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTTSF 138

The following BLAST results are available for this feature:
BLAST of MELO3C031290.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0033241.12.89e-3498.41hypothetical protein E6C27_scaffold845G00350 [Cucumis melo var. makuwa] >TYK2041... [more]
TYK27262.12.35e-1268.33hypothetical protein E5676_scaffold244G00290 [Cucumis melo var. makuwa][more]
KAA0040296.12.29e-0675.00hypothetical protein E6C27_scaffold2379G00310 [Cucumis melo var. makuwa][more]
TYK03091.13.21e-0656.86reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0037581.13.21e-0656.86reverse transcriptase [Cucumis melo var. makuwa][more]
BLAST of MELO3C031290.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031290.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SUV21.40e-3498.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DUS71.14e-1268.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TDY31.11e-0675.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BTP31.55e-0656.86Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5A7T7M61.55e-0656.86Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
BLAST of MELO3C031290.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031290.jh1.t1MELO3C031290.jh1.t1mRNA