MELO3C031270 (gene) Melon (DHL92) v4

Overview
NameMELO3C031270
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein isoform X1
Locationchr05: 22316207 .. 22316416 (-)
RNA-Seq ExpressionMELO3C031270
SyntenyMELO3C031270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATTTGGTTTGTATTACTTGCAATCTTTCAGTATGATTTTGTTGACGAAGTACAAACTTTCTCCGTGGAACACAGAACCACAGAACGCGTAGATCACATTATTCAACAGACTCGACGACTTACTGTTGCTGACACAGATCGTAGACGCATGCGACGTAGACTACGACGGCAAGGCGATGATGTCGTAGAGGGTGACGAGGATAATTAA

mRNA sequence

ATAATTTGGTTTGTATTACTTGCAATCTTTCAGTATGATTTTGTTGACGAAGTACAAACTTTCTCCGTGGAACACAGAACCACAGAACGCGTAGATCACATTATTCAACAGACTCGACGACTTACTGTTGCTGACACAGATCGTAGACGCATGCGACGTAGACTACGACGGCAAGGCGATGATGTCGTAGAGGGTGACGAGGATAATTAA

Coding sequence (CDS)

ATAATTTGGTTTGTATTACTTGCAATCTTTCAGTATGATTTTGTTGACGAAGTACAAACTTTCTCCGTGGAACACAGAACCACAGAACGCGTAGATCACATTATTCAACAGACTCGACGACTTACTGTTGCTGACACAGATCGTAGACGCATGCGACGTAGACTACGACGGCAAGGCGATGATGTCGTAGAGGGTGACGAGGATAATTAA

Protein sequence

IIWFVLLAIFQYDFVDEVQTFSVEHRTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDDVVEGDEDN
Homology
BLAST of MELO3C031270 vs. NCBI nr
Match: KAA0048620.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-21
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEHRTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDDVVEGDEDN 70
           YDFVDEVQTFSVEHRTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDDVVEGDEDN
Sbjct: 261 YDFVDEVQTFSVEHRTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDDVVEGDEDN 318

BLAST of MELO3C031270 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.6e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 512 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 571

BLAST of MELO3C031270 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.6e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 865 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 924

BLAST of MELO3C031270 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.6e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 473 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 532

BLAST of MELO3C031270 vs. NCBI nr
Match: TYK01398.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.6e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 379 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 438

BLAST of MELO3C031270 vs. ExPASy TrEMBL
Match: A0A5A7TZP5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00040 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.5e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEHRTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDDVVEGDEDN 70
           YDFVDEVQTFSVEHRTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDDVVEGDEDN
Sbjct: 261 YDFVDEVQTFSVEHRTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDDVVEGDEDN 318

BLAST of MELO3C031270 vs. ExPASy TrEMBL
Match: A0A5A7TSW1 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00240 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 430 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 489

BLAST of MELO3C031270 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 512 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 571

BLAST of MELO3C031270 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 865 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 924

BLAST of MELO3C031270 vs. ExPASy TrEMBL
Match: A0A5D3BQW5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00920 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 57/68 (83.82%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 12  YDFVDEVQTFSVEH----------RTTERVDHIIQQTRRLTVADTDRRRMRRRLRRQGDD 70
           YDFVDEVQTFSVEH          RTTERVDHIIQQTRRLTVADTDRRRMRRR RRQGDD
Sbjct: 379 YDFVDEVQTFSVEHDIEALGQICDRTTERVDHIIQQTRRLTVADTDRRRMRRRRRRQGDD 438

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0048620.12.0e-21100.00serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
TYK03303.12.6e-1883.82serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0042980.12.6e-1883.82serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0051993.12.6e-1883.82serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
TYK01398.12.6e-1883.82serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZP59.5e-22100.00Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7TSW11.3e-1883.82Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5D3BUF51.3e-1883.82Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7TI341.3e-1883.82Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5D3BQW51.3e-1883.82Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031270.1MELO3C031270.1mRNA