MELO3C031246 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031246
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	DNA primase
Location	chr09: 837753 .. 840953 (-)
RNA-Seq Expression	MELO3C031246
Synteny	MELO3C031246

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTTTTCTACTTCAGCCTGCAAAGAGACATGCATATGCTGGCGATAACGTATTTACTCCAGTGGAAAGGGAGCTGGTTTTTGATATTGTAAGCAGATTGTTTTTCATGATGCTCACTATATTCTAATTCTATTTAAAAGTTAATTACTAGGTTATTTTCATTGAGAAATTAATTGAAAATTTTCCTCCATATACAGGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTAGATTGCTGGCCTCTAATGACAGCTGCCATAAAAGTGATCGATACTACCCTTCGAGGTAAAAATATTTGCCATATGTTTCTGAAAAGTAGTTCAAGAAATGAGTATGTTTGTATCCATTCTCCCAACTATTAACTTGGAAAGGAATGAACACAGAGAATGTTGTATATTATTTAATGCTAGCACTCTTGAGAGAAATCATTTACCTTCTTGGTAGCTTCTCCTCCAGATCCCATGCCTAAGCCTATTTCTTTTTTCACTTTTGTTGAGAATGAGATATTCCATATTGGACTCTTAAGTGTACTTACTTCCTTTTAACTTATTCCTAAAGGCTTACTTCAACATGGAATTTTATTCAAAGAGAAGTAGGAAATATGATATGCATAAAAGTTGTTGCCAGTTCTGTTCTGCAGTACTACTTTATCTTGTGGAGCCAGTTATATGTGTAATGGTTATCTTTATTTAAATATGTCCATTCATTGAGCCTATCTCAACAAATATTTTGAAGGGATATTCTAAATTAACCATTGTGGCACTTCACGTTGTCCATTGCATCTGAGAATTAAGGTTTCAATTGCGGTCCTTTGATTAGAATCATTAGATAGTACAGGGTGTTCTGTTCTCTCCCATTAGATACACTTCACTTGAAATTTTTGTTGCAGATGACTTTGGTTTTAACCACATTCTATGGGTATTTAGTGGTCGCCGTGGTGTTCATTGTTGGGTCTGTGATGGGAAAGCTAGAAGGTAAAGCTAGTAATCAAATTGTTGAATTTGTAGTAAATTATATTATCTGTAAAGGTCTAAAATTCCCACCATCACTGCTACAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGAGTATTTCCATTTATATCAGGTTATACTGTGGTGTTATAAAATATTGGCCTATTGGGAATTTTAGTATCTATGGAGCTGAATATGGTTAATGTGCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCAGTTCTTCATCCATTCCTAGCGTAAGTGGTGCTTAATATTAAAATGTGATGATTCGAGTCTCATTTTCTTTCTCATCCAACGTATGCAACTTTTTCAGGAGATCGTACACAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTTGTAGACAAAAGATTTTTTCAACTGAGGAGAGATATGAGAAAATATTAGATATGATTCCTGATGAATGTAAGTGAATTTATGTATTTGTCTCAGGTAAGTACTGTCAGTATGATAATCTTTAGATACTAATAGAGTTTTACTCTTGCAGCCATTACCTCAGACCTACGGGGAAGGTGGCAAGATAATAGGCGATCCTCTAAAAATGATGTTAACTCATTAAGATGGGAGCAACTGAAAAATCTATTGCAATCAGGGAAACATAAGGTATAATCAACATCTATTCGTGTACTTGCAAGAAGTTACATCTTGGAATAGTTTATTGATGAGGAGTTTGTGTTGTAATGTTGCAGTTTGGAACCATTGTTGTCCAGTGTAATTAGTACCGAAAATAGAGTCAGAAGTGATTTTTCCCTTTTGTTTATGCTTTCTTTTTTCCAGCTAAATTTACTAAACAGGGGAGGGATAGCCAATATGCATGGTATTTTCCTCGGGGAAGCAAACATAGATTTCGAGCTTGAGGAAGATGAAGGAGCTAATATTTTTTAAAGAACTTTACCGAGTTACAGCTACTTTATGTTCTAAGGACTTTACTCCCCCTCCCCCTTCTGAAGCCAGTTCACCTTCTTACCTTCTCCTTCAATGATAACTTCATACACCTTTTCTCTTTCTGCACTATGTCTCACATTTATGGGTGATCGCAATTCAACTTTCTTCTGGTAAACGCCTCCAATTAACACCTTTGACCAATCTACTAACTCATCTACTCTCCTCTACCAATGATTAAAAACAAGTTTGTTTCTTTCAACTCCATAATTTCCATGAAAATCTTCTTTGCAAGTAGCATGAAACACTTCACCTTCATGGACACTTCTCCTTGAACCATACTTCGACAGATCTCTCAAACTCTTTTCTAGAGAAGAGACAACATTCAAGTAGTCTTGATAGGAACCATTTAATTGGAATATAAATTGTTCTTTAACTTGAAGTACAAGAAATACAATAAAACTTCCCAGGTAATTGAAGAACTCTGATACCACCCTTTGGAGCAAGCTTAAGCCCAAACATCTAATTGATGGCTTGCCTTCGCTCCTTCTCACTTCATTCCTGTTCTCTTCTTAGATAATGAACTTATTAGCCAATGACTAATATGCCCTTATTATCCTAATAATATTTCTAACATTATTTTTCAAGGTCTGTCTTGCTTCACTCTTCCTTTGTGAAGAAGGGTACAGTTCTTTAGAGGTGTGATAAGATCTAGAGAGGAGGATTGTCCCTAGCTTGGTTTATGTCTTGGTCTAGGTGTTTGAGCCTAATGACGTTCCTTTATTTTTTTTTTTTTTGGGGGGGGGGGGGGATTGTCTAGTCAGGTTAATTCCAATCTGCCCTTTTTGTGGGCTCATGTTGCAAGCCTATATTTGTCCCTTTGATATTCTATCATCTTTTTCGATCAGAACTTGGTTCTTCTATTGTATTTGTGCACATACAAATATTTGTTTCAACATTTATCATGTGCAATCCAAGTAGCTGTAATTGTTATTTTCAGTTGCCTTTTCTCCGTCATCTAGCTTCCTCTTTCCCCTTCTTCATTTCTTTCTAGCCATGCTGTGTGGCTGTCAATAAGATGTGTCTTGGTGGAACATATTCTTTTCTTTTTTCTAGTCTTATATGTGAGTATTTGGTTGTATAGAACTGTGCTACATTTAGTCAATAATTACGATGTTTTCTCTGTTCAGGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCTTTTACCTACCCTAGGCTTGATTTGGAG

mRNA sequence

AACTTTTCTACTTCAGCCTGCAAAGAGACATGCATATGCTGGCGATAACGTATTTACTCCAGTGGAAAGGGAGCTGGTTTTTGATATTGTAAGCAGATTGTTTTTCATGATGCTCACTATATTCTAATTCTATTTAAAAGTTAATTACTAGGTTATTTTCATTGAGAAATTAATTGAAAATTTTCCTCCATATACAGGATATGACCGGTCGCCGTGGTGTTCATTGTTGGGTCTGTGATGGGAAAGCTAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGAGTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCAGTTCTTCATCCATTCCTAGCGAGATCGTACACAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTTAGTTTTACTCTTGCAGCCATTACCTCAGACCTACGGGGAAGGTGGCAAGATAATAGGCGATCCTCTAAAAATGATGTTAACTCATTAAGATGGGAGCAACTGAAAAATCTATTGCAATCAGGGAAACATAAGGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCTTTTACCTACCCTAGGCTTGATTTGGAG

Coding sequence (CDS)

ATGACCGGTCGCCGTGGTGTTCATTGTTGGGTCTGTGATGGGAAAGCTAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGAGTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCAGTTCTTCATCCATTCCTAGCGAGATCGTACACAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTTAG

Protein sequence

MTGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTEVLKDSFESQLL

Homology

[Close]

BLAST of MELO3C031246 vs. NCBI nr
Match: XP_008465561.2 (PREDICTED: DNA primase small subunit, partial [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE
Sbjct: 92  SGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 151

Query: 62  VLKDSFESQLL 73
           VLKDSFESQLL
Sbjct: 152 VLKDSFESQLL 162

[Close]

BLAST of MELO3C031246 vs. NCBI nr
Match: KAA0039338.1 (DNA primase, small subunit [Cucumis melo var. makuwa] >TYK00521.1 DNA primase, small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE
Sbjct: 204 SGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 263

Query: 62  VLKDSFESQLL 73
           VLKDSFESQLL
Sbjct: 264 VLKDSFESQLL 274

[Close]

BLAST of MELO3C031246 vs. NCBI nr
Match: XP_004141619.1 (DNA primase small subunit [Cucumis sativus] >XP_031742330.1 DNA primase small subunit [Cucumis sativus] >KGN52619.1 hypothetical protein Csa_007851 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 3.4e-32
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFL RSYTE
Sbjct: 189 SGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLVRSYTE 248

Query: 62  VLKDSFESQLL 73
           VLKDSFESQLL
Sbjct: 249 VLKDSFESQLL 259

[Close]

BLAST of MELO3C031246 vs. NCBI nr
Match: XP_038889665.1 (DNA primase small subunit [Benincasa hispida])

HSP 1 Score: 147.1 bits (370), Expect = 5.7e-32
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSY E
Sbjct: 189 SGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYIE 248

Query: 62  VLKDSFESQLL 73
           VLKDSFESQLL
Sbjct: 249 VLKDSFESQLL 259

[Close]

BLAST of MELO3C031246 vs. NCBI nr
Match: XP_022141835.1 (DNA primase small subunit-like [Momordica charantia] >XP_022141836.1 DNA primase small subunit-like [Momordica charantia] >XP_022141837.1 DNA primase small subunit-like [Momordica charantia] >XP_022141838.1 DNA primase small subunit-like [Momordica charantia])

HSP 1 Score: 145.2 bits (365), Expect = 2.2e-31
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAE+FHLYQGNENSRKKISLTGPVLHPFLARSYTE
Sbjct: 189 SGRRGVHCWVCDGKARRLSNEQRAAIAEHFHLYQGNENSRKKISLTGPVLHPFLARSYTE 248

Query: 62  VLKDSFESQLL 73
           VLKDSFES LL
Sbjct: 249 VLKDSFESTLL 259

[Close]

BLAST of MELO3C031246 vs. ExPASy Swiss-Prot
Match: P49642 (DNA primase small subunit OS=Homo sapiens OX=9606 GN=PRIM1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.6e-11
Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCD   R+LS+  R+ I EY  L +G ++ +KK+ L+  + HPF+ +S   
Sbjct: 160 SGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGQDVKKKVHLSEKI-HPFIRKS-IN 219

Query: 62  VLKDSFESQLL 73
           ++K  FE   L
Sbjct: 220 IIKKYFEEYAL 228

[Close]

BLAST of MELO3C031246 vs. ExPASy Swiss-Prot
Match: P20664 (DNA primase small subunit OS=Mus musculus OX=10090 GN=Prim1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-11
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCD   R+LS+  R+ I EY  L +G ++ +KK+ L   V HPF+ +S   
Sbjct: 160 SGRRGVHCWVCDESVRKLSSAVRSGIVEYLSLVKGGQDVKKKVHLNEKV-HPFVRKS-IN 219

Query: 62  VLKDSFESQLL 73
           ++K  FE   L
Sbjct: 220 IIKKYFEEYAL 228

[Close]

BLAST of MELO3C031246 vs. ExPASy Swiss-Prot
Match: Q7KQM1 (DNA primase small subunit OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0366 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-08
Identity = 22/58 (37.93%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSY 60
           +GRRG+HCWV D   R  + + RAA+A+Y ++  G++  +KK+S+ G   +P   R++
Sbjct: 181 SGRRGIHCWVADESCRYYTTDARAALADYLNILSGSDTKKKKVSIWGKDKYPMFERAF 238

[Close]

BLAST of MELO3C031246 vs. ExPASy Swiss-Prot
Match: Q25998 (DNA primase small subunit OS=Plasmodium falciparum (isolate K1 / Thailand) OX=5839 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-08
Identity = 22/58 (37.93%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSY 60
           +GRRG+HCWV D   R  + + RAA+A+Y ++  G++  +KK+S+ G   +P   R++
Sbjct: 181 SGRRGIHCWVADESCRYYTTDARAALADYLNILSGSDTKKKKVSIWGKDKYPMFERAF 238

[Close]

BLAST of MELO3C031246 vs. ExPASy Swiss-Prot
Match: P10363 (DNA primase small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRI1 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 3.9e-07
Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRG HCWV D +AR L++ QR  + +Y ++ + + N+ K+++L  P  HP LARS  E
Sbjct: 162 SGRRGAHCWVSDKRARALTDVQRRNVLDYVNVIR-DRNTDKRLALKRP-YHPHLARS-LE 221

Query: 62  VLKDSFESQLL 73
            LK  F S +L
Sbjct: 222 QLKPFFVSIML 229

[Close]

BLAST of MELO3C031246 vs. ExPASy TrEMBL
Match: A0A5A7T8Y3 (DNA primase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001310 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.6e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE
Sbjct: 204 SGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 263

Query: 62  VLKDSFESQLL 73
           VLKDSFESQLL
Sbjct: 264 VLKDSFESQLL 274

[Close]

BLAST of MELO3C031246 vs. ExPASy TrEMBL
Match: A0A1S3CPJ4 (DNA primase small subunit OS=Cucumis melo OX=3656 GN=LOC103503192 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.6e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE
Sbjct: 92  SGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 151

Query: 62  VLKDSFESQLL 73
           VLKDSFESQLL
Sbjct: 152 VLKDSFESQLL 162

[Close]

BLAST of MELO3C031246 vs. ExPASy TrEMBL
Match: A0A0A0KUP7 (DNA primase OS=Cucumis sativus OX=3659 GN=Csa_5G647410 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-32
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFL RSYTE
Sbjct: 189 SGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLVRSYTE 248

Query: 62  VLKDSFESQLL 73
           VLKDSFESQLL
Sbjct: 249 VLKDSFESQLL 259

[Close]

BLAST of MELO3C031246 vs. ExPASy TrEMBL
Match: A0A6J1CKZ3 (DNA primase OS=Momordica charantia OX=3673 GN=LOC111012104 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIAE+FHLYQGNENSRKKISLTGPVLHPFLARSYTE
Sbjct: 189 SGRRGVHCWVCDGKARRLSNEQRAAIAEHFHLYQGNENSRKKISLTGPVLHPFLARSYTE 248

Query: 62  VLKDSFESQLL 73
           VLKDSFES LL
Sbjct: 249 VLKDSFESTLL 259

[Close]

BLAST of MELO3C031246 vs. ExPASy TrEMBL
Match: A0A6J1I8T4 (DNA primase OS=Cucurbita maxima OX=3661 GN=LOC111472037 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCDGKARRLSNEQRAAIA+YFHLYQGNENSRKKISLTGPVLHPFLARSY E
Sbjct: 184 SGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIE 243

Query: 62  VLKDSFESQLL 73
           VLKDSFES+LL
Sbjct: 244 VLKDSFESKLL 254

[Close]

BLAST of MELO3C031246 vs. TAIR 10
Match: AT5G41880.1 (DNA primases;DNA primases )

HSP 1 Score: 110.5 bits (275), Expect = 5.5e-25
Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 2   TGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLARSYTE 61
           +GRRGVHCWVCD KARRL+NEQR+A+AEYF +Y+GNEN+ KK+ L G  LHPFLARSY +
Sbjct: 187 SGRRGVHCWVCDAKARRLTNEQRSAVAEYFRVYKGNENNAKKVDLMGHSLHPFLARSYVD 246

Query: 62  VLKDSFESQL 72
            +K  FE +L
Sbjct: 247 FIKSFFEGEL 256

The following BLAST results are available for this feature:

BLAST of MELO3C031246 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465561.2	1.2e-32	98.59	PREDICTED: DNA primase small subunit, partial [Cucumis melo]	[more]
KAA0039338.1	1.2e-32	98.59	DNA primase, small subunit [Cucumis melo var. makuwa] >TYK00521.1 DNA primase, s...	[more]
XP_004141619.1	3.4e-32	97.18	DNA primase small subunit [Cucumis sativus] >XP_031742330.1 DNA primase small su...	[more]
XP_038889665.1	5.7e-32	97.18	DNA primase small subunit [Benincasa hispida]	[more]
XP_022141835.1	2.2e-31	95.77	DNA primase small subunit-like [Momordica charantia] >XP_022141836.1 DNA primase...	[more]

BLAST of MELO3C031246 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49642	7.6e-11	43.66	DNA primase small subunit OS=Homo sapiens OX=9606 GN=PRIM1 PE=1 SV=1	[more]
P20664	9.9e-11	45.07	DNA primase small subunit OS=Mus musculus OX=10090 GN=Prim1 PE=1 SV=1	[more]
Q7KQM1	1.2e-08	37.93	DNA primase small subunit OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF1...	[more]
Q25998	1.2e-08	37.93	DNA primase small subunit OS=Plasmodium falciparum (isolate K1 / Thailand) OX=58...	[more]
P10363	3.9e-07	43.66	DNA primase small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...	[more]

BLAST of MELO3C031246 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8Y3	5.6e-33	98.59	DNA primase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001310 P...	[more]
A0A1S3CPJ4	5.6e-33	98.59	DNA primase small subunit OS=Cucumis melo OX=3656 GN=LOC103503192 PE=3 SV=1	[more]
A0A0A0KUP7	1.6e-32	97.18	DNA primase OS=Cucumis sativus OX=3659 GN=Csa_5G647410 PE=3 SV=1	[more]
A0A6J1CKZ3	1.1e-31	95.77	DNA primase OS=Momordica charantia OX=3673 GN=LOC111012104 PE=3 SV=1	[more]
A0A6J1I8T4	1.8e-31	94.37	DNA primase OS=Cucurbita maxima OX=3661 GN=LOC111472037 PE=3 SV=1	[more]

BLAST of MELO3C031246 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41880.1	5.5e-25	67.14	DNA primases;DNA primases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002755	DNA primase, small subunit	PFAM	PF01896	DNA_primase_S	coord: 2..70 e-value: 2.9E-14 score: 53.5
None	No IPR available	GENE3D	3.90.920.10	DNA primase, PRIM domain	coord: 2..72 e-value: 2.8E-20 score: 74.7
None	No IPR available	PANTHER	PTHR10536:SF1	DNA PRIMASE	coord: 2..71
None	No IPR available	SUPERFAMILY	56747	Prim-pol domain	coord: 2..57
IPR014052	DNA primase, small subunit, eukaryotic/archaeal	PANTHER	PTHR10536	DNA PRIMASE SMALL SUBUNIT	coord: 2..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031246.1	MELO3C031246.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006269	DNA replication, synthesis of RNA primer
molecular_function	GO:0003896	DNA primase activity