MELO3C031238.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031238.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrotransposon protein
Locationchr05: 5713795 .. 5715713 (+)
RNA-Seq ExpressionMELO3C031238.jh1
SyntenyMELO3C031238.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCGTCGATGTTAAAGAGATGGTAGCAACGTTCCTCAACATTGTTGCACACGATGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGGTGAGACGATTTCCCGTCATTTTAACATGGTTTTGTTCGCCGTTATTTGACTTCATGATGAGCTTTCGAAAAAGTGACAAGCAGTGCCTAACAATTGCACAGATCAAAGATGGACATGGTTTTAGGTATACATTTCTTTACAACTACGTACTTCCAATCCAACCATGTTAGATCTTGTCAATAATCATCAATTATGCGTTGCAGAATTGCCTAAGTGCATTAGATGGAACGTACATAAAAATTAATATTCTAGTAAGTGTGTGTGACACGAAAGAAGATTTCATTTATGTACTTGTCGATTGGGAAGGATCAATTGCGGACTCACGCATCCTTCGTGATGCCATTTCAAGACCTAATGGCTTGAAGGTGCCCAAGGGTAACTACCCACGGCATTGTACGTATAAATACAATTTTGTAATTAACAGCTGTGACATTTTAATCATGCAATGTGATAACAGGCTATTACTACCTGATTGATACTAGGTACCAAAATGTAGAGGGTTTCCTGGCACCCTATAAAGGCCAACGCTACCACTTGTAGAAATGGCGTGGCACTGAAAATGCACTTCAACCTCTTAAAAGTTCTTCAATATGAAGCATTCATCTGCTCGTAATGTAATAGAACGAGCATTTGATGTCTTGAAGAGTCGATGAGCGATACTGCGGGGAAAGTCACACTATCCTATAGAAATCCAATGTCGTACAATACTCGCATGTTGTCTCTTCCACAAACTTATCAATAGAGAGATGACAAACATTGACATAGAAGACGACATAAATGAGGTTGATTCCACTCATGCGACTATTGTCGGCGTTAACATAAATTATAAAGAGACGTTCAATGAGTGGACTTAGTGGAGGGACAAGCTTGCAGAAGAAATGTTTACTAACTGGGATTTACGTAACCAGTAGATTTTCTCATGATTCTACCGTTCATTTTCATATTTAAGTAGTCATTGCATTGGGTTATATTTTGTCATAGTTTTTGGAATATATTTGTTTTGAATGTATTGATTACACAAGTAAATTAATGGCAAACTGTTTTTCAGTAGGAGTTGAATATACTATGTATTTATGTTCTAATCATACGGAAATTAATGAAACTAATATGTTTGCATTTGATTTCTAGCATGGCAAGTATATCAAAACTACCTAAGCACAGTTGGACGAAAGAGGAAGAGGCAGGCCCATCGAGTTAGTAAATGCTAGTGGGTGGAGGTCCGATAATGGGACCTTTCACCATGGGTACCTAAATCAGCTGGCGAGAATGATGACATTCAAGATTCCAGGTTGTAACGTCCATGCTTCAACAATCGATAGCCGAATAAAATTGTTGAAGTGAATATTTCATGCGCTAGCAGTGATGCGTGGCCCAACCTGCAATAGGTTTAGGTGGAACGATGAACAAAAGTGCATCGTCGCAGAGAAAGAAGTCTTCGACAATTGGGTCAAGGTGCATTACTACTCATTTCAACAACTACTGTAGTATATTTAAAAAAAGGATTAACCATTTATTATTGTACATTTATAGAGTCATCCGGTTGCTAAGGGTCTCCTTAATAAATCATTTCCCCACTATGATGAACTGTCGTACATGTTTGGCAAAGATCGTGCGACGGGAGTACGGGCTGAGACTTTTGCAGACGTTGGGTCAAACGATCCTACTGGGTACGAGGCATTTGTCGCTGACGCTACGTCGGATGGACTTCCAGCCAATGTACAGTCAAGGATGTGACATGTCGACTGAGGAATTATGGAAACAAGAACCGCTTGGGTAAGTGAGAGTAGGTATGTTTCAAGCGAGTCTAAGTGAAAACAT

mRNA sequence

ATGGAAGTCGTCGATGTTAAAGAGATGGTAGCAACGTTCCTCAACATTGTTGCACACGATGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGTGATGCGTGGCCCAACCTGCAATAGGTTTAGGTGGAACGATGAACAAAAGTGCATCGTCGCAGAGAAAGAAGTCTTCGACAATTGGGTCAAGAGTCATCCGGTTGCTAAGGGTCTCCTTAATAAATCATTTCCCCACTATGATGAACTGTCGTACATGTTTGGCAAAGATCGTGCGACGGGAGTACGGGCTGAGACTTTTGCAGACGTTGGGTCAAACGATCCTACTGGGTACGAGGCATTTGTCGCTGACGCTACGTCGGATGGACTTCCAGCCAATGTACAGTCAAGGATGTGACATGTCGACTGAGGAATTATGGAAACAAGAACCGCTTGGGTAAGTGAGAGTAGGTATGTTTCAAGCGAGTCTAAGTGAAAACAT

Coding sequence (CDS)

ATGGAAGTCGTCGATGTTAAAGAGATGGTAGCAACGTTCCTCAACATTGTTGCACACGATGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGTGATGCGTGGCCCAACCTGCAATAGGTTTAGGTGGAACGATGAACAAAAGTGCATCGTCGCAGAGAAAGAAGTCTTCGACAATTGGGTCAAGAGTCATCCGGTTGCTAAGGGTCTCCTTAATAAATCATTTCCCCACTATGATGAACTGTCGTACATGTTTGGCAAAGATCGTGCGACGGGAGTACGGGCTGAGACTTTTGCAGACGTTGGGTCAAACGATCCTACTGGGTACGAGGCATTTGTCGCTGACGCTACGTCGGATGGACTTCCAGCCAATGTACAGTCAAGGATGTGA

Protein sequence

MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRSVMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSDGLPANVQSRM
Homology
[Close]
BLAST of MELO3C031238.jh1 vs. NCBI nr
Match: TYK01431.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 242 bits (617), Expect = 1.97e-79
Identity = 130/184 (70.65%), Postives = 131/184 (71.20%), Query Frame = 0 

Query: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS--------------------------- 60
           MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS                           
Sbjct: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRSGSIADSRILRDAISRPNGLKVPKGYYY 60

Query: 61  --------------------------VMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHP 120
                                     +MRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHP
Sbjct: 61  LIDTSMASISKLPKHSWTKEEEAGPSMMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHP 120

Query: 121 VAKGLLNKSFPHYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSDGLPANV 131
           VAKGLLNKSFPHYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSDGLPANV
Sbjct: 121 VAKGLLNKSFPHYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSDGLPANV 180

[Close]
BLAST of MELO3C031238.jh1 vs. NCBI nr
Match: KAA0065651.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (598), Expect = 5.67e-77
Identity = 124/154 (80.52%), Postives = 126/154 (81.82%), Query Frame = 0 

Query: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS-------VMRGPTCN------------ 60
           MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS       ++R                 
Sbjct: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRSGSIADSRILRDAISRPNGLKVPKGYYY 60

Query: 61  ----RFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRA 120
               RFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRA
Sbjct: 61  LIDTRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRA 120

Query: 121 ETFADVGSNDPTGYEAFVADATSDGLPANVQSRM 131
           ETFADVGSNDPTGYEAFVADATSDGLPANVQSRM
Sbjct: 121 ETFADVGSNDPTGYEAFVADATSDGLPANVQSRM 154

[Close]
BLAST of MELO3C031238.jh1 vs. NCBI nr
Match: KAA0048374.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04074.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (402), Expect = 1.32e-45
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 20  DVKNRVIQREFMR-SVMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFP 79
           D + ++++R F     MRGPTC+ F WNDEQKCIVAEKEVFD+WV+SHP AKGLLNKSFP
Sbjct: 38  DSRIKLLKRMFHAIGEMRGPTCSGFGWNDEQKCIVAEKEVFDDWVRSHPAAKGLLNKSFP 97

Query: 80  HYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSD 121
           HYDELSY+F KD ATG RAE+FADVGSNDPTGY+AF A+A SD
Sbjct: 98  HYDELSYVFSKDHATGGRAESFADVGSNDPTGYDAFAANAASD 140

[Close]
BLAST of MELO3C031238.jh1 vs. NCBI nr
Match: KAA0035413.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160 bits (406), Expect = 1.77e-45
Identity = 73/87 (83.91%), Postives = 77/87 (88.51%), Query Frame = 0 

Query: 35  MRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATG 94
           M GPTC+RF WNDEQKCIVAEKEVFDNWVKSHP AKGLLNKSFPHYDELSY+FGKDRATG
Sbjct: 164 MCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFPHYDELSYVFGKDRATG 223

Query: 95  VRAETFADVGSNDPTGYEAFVADATSD 121
            RAE+FAD+G NDP GYE F  DAT D
Sbjct: 224 GRAESFADIGLNDPAGYEPFAVDATPD 250

[Close]
BLAST of MELO3C031238.jh1 vs. NCBI nr
Match: TYK15304.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (399), Expect = 3.44e-45
Identity = 75/103 (72.82%), Postives = 88/103 (85.44%), Query Frame = 0 

Query: 20  DVKNRVIQREFMR-SVMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFP 79
           D + ++++R F   + MRGPTC+ F WNDEQKCIV EKEVFD+WVKSHPVAKGLLNKSFP
Sbjct: 67  DSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFP 126

Query: 80  HYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSD 121
           HYDE  Y+FGKDRATG RA++FADVGSN+P GY+AFVADAT D
Sbjct: 127 HYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPD 169

[Close]
BLAST of MELO3C031238.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BNS4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00150 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 9.54e-80
Identity = 130/184 (70.65%), Postives = 131/184 (71.20%), Query Frame = 0 

Query: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS--------------------------- 60
           MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS                           
Sbjct: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRSGSIADSRILRDAISRPNGLKVPKGYYY 60

Query: 61  --------------------------VMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHP 120
                                     +MRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHP
Sbjct: 61  LIDTSMASISKLPKHSWTKEEEAGPSMMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHP 120

Query: 121 VAKGLLNKSFPHYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSDGLPANV 131
           VAKGLLNKSFPHYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSDGLPANV
Sbjct: 121 VAKGLLNKSFPHYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSDGLPANV 180

[Close]
BLAST of MELO3C031238.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VIU6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G001080 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 2.74e-77
Identity = 124/154 (80.52%), Postives = 126/154 (81.82%), Query Frame = 0 

Query: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS-------VMRGPTCN------------ 60
           MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRS       ++R                 
Sbjct: 1   MEVVDVKEMVATFLNIVAHDVKNRVIQREFMRSGSIADSRILRDAISRPNGLKVPKGYYY 60

Query: 61  ----RFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRA 120
               RFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRA
Sbjct: 61  LIDTRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRA 120

Query: 121 ETFADVGSNDPTGYEAFVADATSDGLPANVQSRM 131
           ETFADVGSNDPTGYEAFVADATSDGLPANVQSRM
Sbjct: 121 ETFADVGSNDPTGYEAFVADATSDGLPANVQSRM 154

[Close]
BLAST of MELO3C031238.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TZA5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871G00090 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 6.38e-46
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0 

Query: 20  DVKNRVIQREFMR-SVMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFP 79
           D + ++++R F     MRGPTC+ F WNDEQKCIVAEKEVFD+WV+SHP AKGLLNKSFP
Sbjct: 38  DSRIKLLKRMFHAIGEMRGPTCSGFGWNDEQKCIVAEKEVFDDWVRSHPAAKGLLNKSFP 97

Query: 80  HYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSD 121
           HYDELSY+F KD ATG RAE+FADVGSNDPTGY+AF A+A SD
Sbjct: 98  HYDELSYVFSKDHATGGRAESFADVGSNDPTGYDAFAANAASD 140

[Close]
BLAST of MELO3C031238.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SXX8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00320 PE=3 SV=1)

HSP 1 Score: 160 bits (406), Expect = 8.58e-46
Identity = 73/87 (83.91%), Postives = 77/87 (88.51%), Query Frame = 0 

Query: 35  MRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATG 94
           M GPTC+RF WNDEQKCIVAEKEVFDNWVKSHP AKGLLNKSFPHYDELSY+FGKDRATG
Sbjct: 164 MCGPTCSRFGWNDEQKCIVAEKEVFDNWVKSHPTAKGLLNKSFPHYDELSYVFGKDRATG 223

Query: 95  VRAETFADVGSNDPTGYEAFVADATSD 121
            RAE+FAD+G NDP GYE F  DAT D
Sbjct: 224 GRAESFADIGLNDPAGYEPFAVDATPD 250

[Close]
BLAST of MELO3C031238.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CWJ7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00110 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 1.67e-45
Identity = 75/103 (72.82%), Postives = 88/103 (85.44%), Query Frame = 0 

Query: 20  DVKNRVIQREFMR-SVMRGPTCNRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFP 79
           D + ++++R F   + MRGPTC+ F WNDEQKCIV EKEVFD+WVKSHPVAKGLLNKSFP
Sbjct: 67  DSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFP 126

Query: 80  HYDELSYMFGKDRATGVRAETFADVGSNDPTGYEAFVADATSD 121
           HYDE  Y+FGKDRATG RA++FADVGSN+P GY+AFVADAT D
Sbjct: 127 HYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPD 169

[Close]
BLAST of MELO3C031238.jh1 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.3e-05
Identity = 15/54 (27.78%), Postives = 34/54 (62.96%), Query Frame = 0 

Query: 41  NRFRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATG 95
           N F W+  +  ++A+ ++++ ++++HP A+    K+ P Y  L ++FGK+ + G
Sbjct: 399 NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNLCFIFGKETSDG 452

[Close]
BLAST of MELO3C031238.jh1 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 6.8e-05
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 43  FRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMFGKDRATGVRAETFAD 102
           F W+ E K   A  EV+ +++K+HP  K +  +S  H+++L  +FG   ATG    +FA 
Sbjct: 90  FGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDHFEDLQIIFGDVVATG----SFA- 149

Query: 103 VGSNDPTGYEAFVADATSDG 123
           VG +D T    +     S G
Sbjct: 150 VGMSDSTCPRIYTVGERSQG 164

[Close]
BLAST of MELO3C031238.jh1 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04
Identity = 16/45 (35.56%), Postives = 29/45 (64.44%), Query Frame = 0 

Query: 43  FRWNDEQKCIVAEKEVFDNWVKSHPVAKGLLNKSFPHYDELSYMF 88
           F W++ +  I A+  V+D+++K HP+A+    KS P Y++L  +F
Sbjct: 246 FSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIF 290

The following BLAST results are available for this feature:
BLAST of MELO3C031238.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01431.11.97e-7970.65retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0065651.15.67e-7780.52retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0048374.11.32e-4572.82retrotransposon protein [Cucumis melo var. makuwa] >TYK04074.1 retrotransposon p... [more]
KAA0035413.11.77e-4583.91retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon p... [more]
TYK15304.13.44e-4572.82retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C031238.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031238.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BNS49.54e-8070.65Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VIU62.74e-7780.52Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TZA56.38e-4672.82Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SXX88.58e-4683.91Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CWJ71.67e-4572.82Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C031238.jh1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24960.22.3e-0527.78unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G30140.16.8e-0533.75unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.14.4e-0435.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 35..103
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 35..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031238.jh1.t1MELO3C031238.jh1.t1mRNA