MELO3C031179 (gene) Melon (DHL92) v4

Overview
NameMELO3C031179
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTSA1-like protein
Locationchr06: 13285251 .. 13285458 (-)
RNA-Seq ExpressionMELO3C031179
SyntenyMELO3C031179
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAGTCTTACTCATGATTCCATGGTCGACGAAGACAAGATTGAGGTTGATCGTAAAGGATTTGGGAAGAGGAAGGAACCAATCGAGGAGTCGAGAAAGATGGAGAGTGAGATTCAACAACTAAAGGAATTGTACA

mRNA sequence

ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAGTCTTACTCATGATTCCATGGTCGACGAAGACAAGATTGAGGTCAATCGAGGAGTCGAGAAAGATGGAGAGTGAGATTCAACAACTAAAGGAATTGTACA

Coding sequence (CDS)

ATGAGGAAGGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATACGAGTTTCTGAGGCTTGACAGTCTTACTCATGATTCCATGGTCGACGAAGACAAGATTGAGGTCAATCGAGGAGTCGAGAAAGATGGAGAGTGA

Protein sequence

MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVNRGVEKDGE
Homology
BLAST of MELO3C031179 vs. NCBI nr
Match: KAA0047373.1 (TSA1-like protein [Cucumis melo var. makuwa] >TYK14049.1 TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 4.5e-12
Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVNR 43
          MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEV+R
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDR 42

BLAST of MELO3C031179 vs. NCBI nr
Match: KAA0048522.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYE+LQSKYEFLRLD+LTHDSMVD+DKIEV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C031179 vs. NCBI nr
Match: TYK28313.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYE+LQSKYEFLRLD+LTHDSMVD+DKIEV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C031179 vs. NCBI nr
Match: XP_031739615.1 (TSA1-like protein [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYELLQSKYEFLRLD+LTH SMV++DK+EV+
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 98

BLAST of MELO3C031179 vs. NCBI nr
Match: KAE8649201.1 (hypothetical protein Csa_014777 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-09
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYELLQSKYEFLRLD+LTH SMV++DK+EV+
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 98

BLAST of MELO3C031179 vs. ExPASy TrEMBL
Match: A0A5A7TUZ5 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00230 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.2e-12
Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVNR 43
          MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEV+R
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVDR 42

BLAST of MELO3C031179 vs. ExPASy TrEMBL
Match: A0A5D3DX93 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001380 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.0e-11
Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYE+LQSKYEFLRLD+LTHDSMVD+DKIEV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C031179 vs. ExPASy TrEMBL
Match: A0A5A7TYB0 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001430 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.0e-11
Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYE+LQSKYEFLRLD+LTHDSMVD+DKIEV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO3C031179 vs. ExPASy TrEMBL
Match: A0A0A0KYB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYELLQSKYEFLRLD+LTH SMV++DK+EV+
Sbjct: 52 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 92

BLAST of MELO3C031179 vs. ExPASy TrEMBL
Match: A0A5A7UY16 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00150 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-08
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVN 42
          MRKEIESKNKEYE LQSKYEFLRL +LTH SMVD+D IEV+
Sbjct: 13 MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0047373.14.5e-1297.62TSA1-like protein [Cucumis melo var. makuwa] >TYK14049.1 TSA1-like protein [Cucu... [more]
KAA0048522.11.4e-1090.24TSA1-like protein [Cucumis melo var. makuwa][more]
TYK28313.11.4e-1090.24TSA1-like protein [Cucumis melo var. makuwa][more]
XP_031739615.12.1e-0985.37TSA1-like protein [Cucumis sativus][more]
KAE8649201.12.1e-0985.37hypothetical protein Csa_014777 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TUZ52.2e-1297.62TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00... [more]
A0A5D3DX937.0e-1190.24TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
A0A5A7TYB07.0e-1190.24TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001... [more]
A0A0A0KYB91.0e-0985.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1[more]
A0A5A7UY161.9e-0882.93TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031179.1MELO3C031179.1mRNA