MELO3C031156 (gene) Melon (DHL92) v4

Overview


Name	MELO3C031156
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	S-protein homolog
Location	chr05: 17444563 .. 17446088 (+)
RNA-Seq Expression	MELO3C031156
Synteny	MELO3C031156

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCGAGCTTGGATTTGGTAACATGGTATGTTAAGGTGGTAAGGGGACACGTGTAAAGTTGTAATCCTAAGTCCAAATTTGGAACCTTGTGTTAGAGATTGATTTGAGAAGTTCTACTTACTAGGCATTTAACTTGTTATCTAGCGGAGAGGTACCCATTGGGTGTCCAGGTAGCACGTCTCCTTCTGGTCGCAGAAAGTGACTAGTGGGGCTAGGCGTGACATTGGGTGATTTGTTTACTAAGGTAGAGGATACCTGTTTTTTCTCTAAAATTGATTTGAAATCAAATTATCAGCAACTAAGAATTAAGAAGTTACATGTACCAAAGACGACATTCAGAATGAGTTTTGGACATTTTAAATTCTTGGGACGTCATTTAGCTTGCTTAACACCCCACCTAGATTGGGCTTAGTGAATTAAATATTTCTCACCTGATAAATTTTGTATTTTTTCTTTTAAATATTTGATTCAGTTTCTAACTTTTAGTTTTATCCCATTTTTCAATATTTTCTTACCTAAATAATAAACTAATTTTTTAACCAAAAGAAGAAAATAAATAAAAAAAGAAAAATAAAACAAGAAAACAGAAGGATATAACTTGCTGTTATAGAGTTCATTGTGCACAAAAAACTGGATTTGTTTACATCTTTCATCTCTCTAATTTGTTTTAATTAATTGTGTGGATATAGGGAAACATGCACTAATTATAACATTAATTATGAAATAAATTATCCAATTTTCACATATATTTCATATATTCCTTACTTTACTTTACTTTTATTTTATTATTAACTATGCGTAAATGTGAAATGCTAACTTGTAGTTACATAGAATCTGTTATGGGTTTCCAAAAATTCTCATACTTCCTCCTTATAATTATTTTTGGTAAATGGATGTTAATATCTAACTTACAATTAAATTAACACTCTTTTTACGGAAAGTTTCTAGTAATGCAGTTTCCTAAACAACCGTCAAACTTCCATATATATATGAAGCTTTTGATTATATCCTTTTTGCAATCAAAGAACTTGAAAAAAAAAACAAGTAATTGATATATTATTACATTGTCATAGTTCTTTATCTCTTTCATTAGCAAAATGACTTCATATTTAGCAATTGCATTCTCAATGTTCTTGTTATTACCCTTTAGCTTGCATGCCACAGATGAGTTGATCTCACTTTTACCGAAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGACCTAGGAGTTAACGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCCAACATCTAGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACCATTTATGACTTTAAAAGAGATGGAAAGACTTGCACGAATTGTAGATGGCTCGTTTATGCAAGTGGCCCATGTTTACAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGAAATATTAG

mRNA sequence

TGTCGAGCTTGGATTTGGTAACATGGTATGTTAAGGTGGTAAGGGGACACGTGTAAAGTTGTAATCCTAAGTCCAAATTTGGAACCTTGTGTTAGAGATTGATTTGAGAAGTTCTACTTACTAGGCATTTAACTTGTTATCTAGCGGAGAGGTACCCATTGGGTGTCCAGGTAGCACGTCTCCTTCTGGTCGCAGAAAGTGACTAGTGGGGCTAGGCGTGACATTGGCAATTGCATTCTCAATGTTCTTGTTATTACCCTTTAGCTTGCATGCCACAGATGAGTTGATCTCACTTTTACCGAAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGACCTAGGAGTTAACGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCCAACATCTAGGGAACGACATTATTTTACTGCGTCTTCGAATGGGTTAAAGGTCAACCCCACTACTTCACCATTTATGACTTTAAAAGAGATGGAAAGACTTGCACGAATTGTAGATGGCTCGTTTATGCAAGTGGCCCATGTTTACAACACTCTGAAACCTCTATTACTTGCTTTCCTTGGAACAAGAATGCTCCAGAGTTGAAATATTAG

Coding sequence (CDS)

ATGTTCTTGTTATTACCCTTTAGCTTGCATGCCACAGATGAGTTGATCTCACTTTTACCGAAAACTACAGTCACTATTGTTAACGAAGTGGGTGGCCCTCTGTTGGGCATTCATTGTAGATCCAAGCAAGATGACCTAGGAGTTAACGTCGTATCGTCAGATAAAAGTTACTCATTTAACTTTAGACCCAACATCTAG

Protein sequence

MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI

Homology

[Close]

BLAST of MELO3C031156 vs. NCBI nr
Match: ABY56091.1 (self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility protein 3 [Cucumis melo] >ABY56096.1 self-incompatibility protein 4 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-26
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
          MFLLLP SLHATDELISLLP+TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN
Sbjct: 11 MFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 70

Query: 61 FRPNI 66
          FRPN+
Sbjct: 71 FRPNV 75

[Close]

BLAST of MELO3C031156 vs. NCBI nr
Match: ABY56092.1 (self-incompatibility protein 2 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-26
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1   MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
           MFLLLP SLHATDELISLLP+TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN
Sbjct: 81  MFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 140

Query: 61  FRPNI 66
           FRPN+
Sbjct: 141 FRPNV 145

[Close]

BLAST of MELO3C031156 vs. NCBI nr
Match: KAA0046095.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1  MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
          MFLLLP SL ATDELISLLP+TTV IVNEVGGPLLGIHCRSKQDDLGVNVVS DKSYSFN
Sbjct: 1  MFLLLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSFN 60

Query: 61 FRPNI 66
          F PNI
Sbjct: 61 FGPNI 65

[Close]

BLAST of MELO3C031156 vs. NCBI nr
Match: KAA0046083.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 9.8e-23
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1  MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
          MFLLLP SL A DELISLLP+TTVTIVNEVGGPLLGIH R KQDDLGVNVVSSDKSYSFN
Sbjct: 1  MFLLLPISLRAIDELISLLPETTVTIVNEVGGPLLGIHYRFKQDDLGVNVVSSDKSYSFN 60

Query: 61 FRPNI 66
          FRPNI
Sbjct: 61 FRPNI 65

[Close]

BLAST of MELO3C031156 vs. NCBI nr
Match: KAA0046284.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 7.7e-20
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 13  DELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
           +ELISLLP+TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI
Sbjct: 70  NELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 122

[Close]

BLAST of MELO3C031156 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-08
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 22 TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
          T VT+ N +GGP L IHC+SKQDDLG++VV   + Y F F+PN+
Sbjct: 29 TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNL 72

[Close]

BLAST of MELO3C031156 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 21 KTTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
          K+ VTI N +G G  L +HC+S  DDLG+ +++ + S+SF FRP+I
Sbjct: 37 KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSI 82

[Close]

BLAST of MELO3C031156 vs. ExPASy TrEMBL
Match: B0F817 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
          MFLLLP SLHATDELISLLP+TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN
Sbjct: 11 MFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 70

Query: 61 FRPNI 66
          FRPN+
Sbjct: 71 FRPNV 75

[Close]

BLAST of MELO3C031156 vs. ExPASy TrEMBL
Match: B0F818 (S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1   MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
           MFLLLP SLHATDELISLLP+TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN
Sbjct: 81  MFLLLPISLHATDELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 140

Query: 61  FRPNI 66
           FRPN+
Sbjct: 141 FRPNV 145

[Close]

BLAST of MELO3C031156 vs. ExPASy TrEMBL
Match: A0A5A7TXE8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00180 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1  MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
          MFLLLP SL ATDELISLLP+TTV IVNEVGGPLLGIHCRSKQDDLGVNVVS DKSYSFN
Sbjct: 1  MFLLLPISLSATDELISLLPETTVAIVNEVGGPLLGIHCRSKQDDLGVNVVSPDKSYSFN 60

Query: 61 FRPNI 66
          F PNI
Sbjct: 61 FGPNI 65

[Close]

BLAST of MELO3C031156 vs. ExPASy TrEMBL
Match: A0A5A7TR91 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00040 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.7e-23
Identity = 59/65 (90.77%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1  MFLLLPFSLHATDELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFN 60
          MFLLLP SL A DELISLLP+TTVTIVNEVGGPLLGIH R KQDDLGVNVVSSDKSYSFN
Sbjct: 1  MFLLLPISLRAIDELISLLPETTVTIVNEVGGPLLGIHYRFKQDDLGVNVVSSDKSYSFN 60

Query: 61 FRPNI 66
          FRPNI
Sbjct: 61 FRPNI 65

[Close]

BLAST of MELO3C031156 vs. ExPASy TrEMBL
Match: A0A5A7TT98 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00010 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.7e-20
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 13  DELISLLPKTTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
           +ELISLLP+TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI
Sbjct: 70  NELISLLPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 122

[Close]

BLAST of MELO3C031156 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-09
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 22 TTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
          T VT+ N +GGP L IHC+SKQDDLG++VV   + Y F F+PN+
Sbjct: 29 TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNL 72

[Close]

BLAST of MELO3C031156 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 50.4 bits (119), Expect = 6.1e-07
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 20 PKTTVTIVNEVGGPL-LGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
          P+TTV I N++GG L L  HC+SK DDLG   ++ + ++SF FRP++
Sbjct: 26 PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSV 72

[Close]

BLAST of MELO3C031156 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 50.1 bits (118), Expect = 8.0e-07
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 21 KTTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
          K+ VTI N +G G  L +HC+S  DDLG+ +++ + S+SF FRP+I
Sbjct: 37 KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSI 82

[Close]

BLAST of MELO3C031156 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 45.4 bits (106), Expect = 2.0e-05
Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 22 TTVTIVNEVGGPL-LGIHCRSKQDDLGVNVVSSDKSYSFNFRPNI 66
          T+V I N++GG L L  HC+S++DDLG   ++  +S+SF F P+I
Sbjct: 26 TSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDI 70

[Close]

BLAST of MELO3C031156 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 43.5 bits (101), Expect = 7.5e-05
Identity = 23/66 (34.85%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 1  MFLLLPFSLHATDELISLLPKTTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDKSYSF 60
          + + + FS   TD  ++      V I N +G G  L +HC+S  DDLG+ +++ + S+SF
Sbjct: 16 LLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSF 75

Query: 61 NFRPNI 66
           FR +I
Sbjct: 76 KFRTSI 81

The following BLAST results are available for this feature:

BLAST of MELO3C031156 vs. NCBI nr


Match Name	E-value	Identity	Description
ABY56091.1	3.2e-26	95.38	self-incompatibility protein 1 [Cucumis melo] >ABY56095.1 self-incompatibility p...	[more]
ABY56092.1	3.2e-26	95.38	self-incompatibility protein 2 [Cucumis melo]	[more]
KAA0046095.1	2.6e-23	90.77	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0046083.1	9.8e-23	90.77	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0046284.1	7.7e-20	96.23	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C031156 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	1.4e-08	56.82	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	1.1e-05	47.83	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]

BLAST of MELO3C031156 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B0F817	1.6e-26	95.38	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
B0F818	1.6e-26	95.38	S-protein homolog OS=Cucumis melo OX=3656 PE=3 SV=1	[more]
A0A5A7TXE8	1.2e-23	90.77	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00...	[more]
A0A5A7TR91	4.7e-23	90.77	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00...	[more]
A0A5A7TT98	3.7e-20	96.23	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold384G00...	[more]

BLAST of MELO3C031156 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	1.0e-09	56.82	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	6.1e-07	48.94	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	8.0e-07	47.83	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	2.0e-05	46.67	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	7.5e-05	34.85	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 23..65 e-value: 1.6E-8 score: 35.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031156.1	MELO3C031156.1	mRNA