MELO3C031129.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031129.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionAcetyl-CoA carboxylase 1-like
Locationchr05: 9671435 .. 9671593 (+)
RNA-Seq ExpressionMELO3C031129.jh1
SyntenyMELO3C031129.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGAAAGGGGAAGGCCTTTAATAACACAAGAGTGAAGCGGTCGATTAAGGTGTCCACGATTGGTAACAAACTAGCAGATATGTTGATTATTAATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCACACTCAAGGTATACAAATATGA

mRNA sequence

ATGGTAGGAAAGGGGAAGGCCTTTAATAACACAAGAGTGAAGCGGTCGATTAAGGTGTCCACGATTGGTAACAAACTAGCAGATATGTTGATTATTAATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCACACTCAAGGTATACAAATATGA

Coding sequence (CDS)

ATGGTAGGAAAGGGGAAGGCCTTTAATAACACAAGAGTGAAGCGGTCGATTAAGGTGTCCACGATTGGTAACAAACTAGCAGATATGTTGATTATTAATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCACACTCAAGGTATACAAATATGA

Protein sequence

MVGKGKAFNNTRVKRSIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQGIQI
Homology
BLAST of MELO3C031129.jh1 vs. NCBI nr
Match: KAA0032276.1 (NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 1.53e-17
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 0

Query: 3   GKGKAFNNTRVKRSIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQGI 50
           GKGKAFNNTRVKRSIKV TI NKLADM+II+ GNMAKSQSR+L TQG+
Sbjct: 71  GKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQGV 118

BLAST of MELO3C031129.jh1 vs. NCBI nr
Match: KAA0065344.1 (ABC transporter I family member 6 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 6.81e-17
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0

Query: 3   GKGKAFNNTRVKRSIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQGIQ 51
           GKGKAFNNTRVKRSIKV TI NKLADM+II  GNM KSQSR+LHTQG+Q
Sbjct: 419 GKGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQGLQ 467

BLAST of MELO3C031129.jh1 vs. NCBI nr
Match: KAA0045996.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.06e-14
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKRSIKVSTIGNKLADMLIINGGNMAKSQSRV 44
           + GKGKAFNNTRVKRSIKV TI NKLADM+II+GGNMAKSQS++
Sbjct: 200 ITGKGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

BLAST of MELO3C031129.jh1 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 5.82e-14
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVK----RSIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQ 48
           ++ K KAFNNTRVK    RSIKV TI N+LADM+II+GGNMAKSQSRVLHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

BLAST of MELO3C031129.jh1 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.33e-13
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKR----SIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQ 48
           + GKGKAFNNTRVK     SIKV TI NKLADM+II+GGNMAKSQS+VL TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

BLAST of MELO3C031129.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SQI0 (NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001160 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.40e-18
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 0

Query: 3   GKGKAFNNTRVKRSIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQGI 50
           GKGKAFNNTRVKRSIKV TI NKLADM+II+ GNMAKSQSR+L TQG+
Sbjct: 71  GKGKAFNNTRVKRSIKVPTISNKLADMMIIHRGNMAKSQSRLLRTQGV 118

BLAST of MELO3C031129.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VDI7 (ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold301G00160 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.30e-17
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0

Query: 3   GKGKAFNNTRVKRSIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQGIQ 51
           GKGKAFNNTRVKRSIKV TI NKLADM+II  GNM KSQSR+LHTQG+Q
Sbjct: 419 GKGKAFNNTRVKRSIKVPTISNKLADMMIIYRGNMTKSQSRLLHTQGLQ 467

BLAST of MELO3C031129.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TV25 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005560 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.14e-15
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKRSIKVSTIGNKLADMLIINGGNMAKSQSRV 44
           + GKGKAFNNTRVKRSIKV TI NKLADM+II+GGNMAKSQS++
Sbjct: 200 ITGKGKAFNNTRVKRSIKVPTISNKLADMMIIHGGNMAKSQSKI 243

BLAST of MELO3C031129.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.82e-14
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVK----RSIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQ 48
           ++ K KAFNNTRVK    RSIKV TI N+LADM+II+GGNMAKSQSRVLHTQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQSRVLHTQ 192

BLAST of MELO3C031129.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.45e-14
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKR----SIKVSTIGNKLADMLIINGGNMAKSQSRVLHTQ 48
           + GKGKAFNNTRVK     SIKV TI NKLADM+II+GGNMAKSQS+VL TQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQSKVLRTQ 350

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0032276.11.53e-1783.33NAD-dependent protein deacylase SRT2 isoform X2 [Cucumis melo var. makuwa][more]
KAA0065344.16.81e-1783.67ABC transporter I family member 6 [Cucumis melo var. makuwa][more]
KAA0045996.11.06e-1481.82acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa][more]
KAA0042275.15.82e-1475.00transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma... [more]
KAA0042207.11.33e-1375.00triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SQI07.40e-1883.33NAD-dependent protein deacylase SRT2 isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7VDI73.30e-1783.67ABC transporter I family member 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TV255.14e-1581.82Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TLF62.82e-1475.00Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ... [more]
A0A5A7TKJ76.45e-1475.00Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031129.jh1.t1MELO3C031129.jh1.t1mRNA