MELO3C031079.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031079.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTransmembrane protein
Locationchr05: 1231969 .. 1232388 (-)
RNA-Seq ExpressionMELO3C031079.jh1
SyntenyMELO3C031079.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGGCACCGGCAAGGCAACAAAGAAGAAGAGTTCTAATTCTGGAGGGGCAAAAAAGGCAATGGGTGATCGTCGGAATGAGCAATCGGAAACGGCTCTAGGTTTCTTCGGCGCCGGTGGACACGTCAGAATCTCTGGGATTCTATGTCTCTCTGCTTTTGGAGTACTGCAACCGCCGTCGGAACACTCGTCGCCAAATTCCACGATGTCGTTTTGCGTGACGGCGGCTGGAATCTCCGTCTTCTGCAGCGGTTGTTTCTTGTTCGTCGTTTTCTTGATTTTCTTCGTTAGCTTCAAGTTGGGTAAACTTCTTCTCGTTCTCGTAGCCACTCTTGCTCCTGAAGGCGCCATTTTTGAAGGAAAACAGAGGAATTTGAGTAAGAAGAAAAAACAGAGGGGTTTAAGCGAGAAGATTTAA

mRNA sequence

ATGTCCGGCACCGGCAAGGCAACAAAGAAGAAGAGTTCTAATTCTGGAGGGGCAAAAAAGGCAATGGGTGATCGTCGGAATGAGCAATCGGAAACGGCTCTAGGTTTCTTCGGCGCCGGTGGACACGTCAGAATCTCTGGGATTCTATGTCTCTCTGCTTTTGGAGTACTGCAACCGCCGTCGGAACACTCGTCGCCAAATTCCACGATGTCGTTTTGCGTGACGGCGGCTGGAATCTCCGTCTTCTGCAGCGGTTGTTTCTTGTTCGTCGTTTTCTTGATTTTCTTCGTTAGCTTCAAGTTGGGTAAACTTCTTCTCGTTCTCGTAGCCACTCTTGCTCCTGAAGGCGCCATTTTTGAAGGAAAACAGAGGAATTTGAGTAAGAAGAAAAAACAGAGGGGTTTAAGCGAGAAGATTTAA

Coding sequence (CDS)

ATGTCCGGCACCGGCAAGGCAACAAAGAAGAAGAGTTCTAATTCTGGAGGGGCAAAAAAGGCAATGGGTGATCGTCGGAATGAGCAATCGGAAACGGCTCTAGGTTTCTTCGGCGCCGGTGGACACGTCAGAATCTCTGGGATTCTATGTCTCTCTGCTTTTGGAGTACTGCAACCGCCGTCGGAACACTCGTCGCCAAATTCCACGATGTCGTTTTGCGTGACGGCGGCTGGAATCTCCGTCTTCTGCAGCGGTTGTTTCTTGTTCGTCGTTTTCTTGATTTTCTTCGTTAGCTTCAAGTTGGGTAAACTTCTTCTCGTTCTCGTAGCCACTCTTGCTCCTGAAGGCGCCATTTTTGAAGGAAAACAGAGGAATTTGAGTAAGAAGAAAAAACAGAGGGGTTTAAGCGAGAAGATTTAA

Protein sequence

MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFEGKQRNLSKKKKQRGLSEKI
Homology
BLAST of MELO3C031079.jh1 vs. NCBI nr
Match: XP_016900741.1 (PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo] >KAA0041417.1 transmembrane protein [Cucumis melo var. makuwa] >TYJ96135.1 transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 258 bits (660), Expect = 1.67e-86
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0

Query: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60
           MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP
Sbjct: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60

Query: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120
           SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE
Sbjct: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120

Query: 121 GKQRNLSKKKKQRGLSEKI 139
           GKQRNLSKKKKQRGLSEKI
Sbjct: 121 GKQRNLSKKKKQRGLSEKI 139

BLAST of MELO3C031079.jh1 vs. NCBI nr
Match: QHO18661.1 (uncharacterized protein DS421_11g322430 [Arachis hypogaea])

HSP 1 Score: 65.5 bits (158), Expect = 1.23e-10
Identity = 55/116 (47.41%), Postives = 66/116 (56.90%), Query Frame = 0

Query: 9   KKKSSNSGGAKKAMGDRRNEQ---SETALGFFGAGGHVRISGILCLSAFGV-LQPPSEHS 68
           KKK S SGG K   GDRR EQ    E  L FFGAGGHV ISGIL  S FGV  QPP   S
Sbjct: 2   KKKRSKSGGEKNESGDRRKEQFEDDEITLCFFGAGGHVEISGILNFSPFGVEQQPPLTSS 61

Query: 69  SPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120
             +ST S  +     S+FC     F  FL+FFV   +G  +++++    PEGA+ E
Sbjct: 62  MTSSTSSSFLFL--FSLFCC----FFKFLLFFVFGFVGSDVVIVL----PEGAMRE 107

BLAST of MELO3C031079.jh1 vs. NCBI nr
Match: CAD5323680.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 60.8 bits (146), Expect = 3.50e-09
Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 65
          A  KKSS SGGAKK +  RRN Q    L FFGAGGHV ISGIL   AFGV QPP + S+
Sbjct: 13 ALTKKSSISGGAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPPGDVST 71

BLAST of MELO3C031079.jh1 vs. NCBI nr
Match: QHO48225.1 (uncharacterized protein DS421_1g03730 [Arachis hypogaea])

HSP 1 Score: 58.5 bits (140), Expect = 4.77e-08
Identity = 38/66 (57.58%), Postives = 39/66 (59.09%), Query Frame = 0

Query: 9  KKKSSNSGGAKKAMGDRRNEQ---SETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 68
          KKK S SGG K   GD R EQ    E  L FFGAGGHV ISGIL  S FGV Q P   SS
Sbjct: 2  KKKRSKSGGEKNESGDLRKEQFEDDEITLCFFGAGGHVEISGILNFSPFGVEQQPPLTSS 61

Query: 69 PNSTMS 71
            S+ S
Sbjct: 62 MTSSSS 67

BLAST of MELO3C031079.jh1 vs. NCBI nr
Match: GFY96234.1 (hypothetical protein Acr_11g0005400 [Actinidia rufa])

HSP 1 Score: 55.8 bits (133), Expect = 5.83e-07
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSSP 66
          A KKKSS SGG K A+G+ R+E     L FFG  GH +ISG L L AFGV QP +  S  
Sbjct: 5  ANKKKSSISGGEKAAIGELRSENLAATLFFFGGSGHDKISGNLNLFAFGVEQPDTS-SLL 64

Query: 67 NSTMSFCVTAAGIS 80
          +S++ F  T +G S
Sbjct: 65 SSSLGFFSTKSGFS 77

BLAST of MELO3C031079.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BCF0 (Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001030 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 8.11e-87
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0

Query: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60
           MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP
Sbjct: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60

Query: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120
           SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE
Sbjct: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120

Query: 121 GKQRNLSKKKKQRGLSEKI 139
           GKQRNLSKKKKQRGLSEKI
Sbjct: 121 GKQRNLSKKKKQRGLSEKI 139

BLAST of MELO3C031079.jh1 vs. ExPASy TrEMBL
Match: A0A1S4DXN3 (uncharacterized protein LOC107991009 OS=Cucumis melo OX=3656 GN=LOC107991009 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 8.11e-87
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0

Query: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60
           MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP
Sbjct: 1   MSGTGKATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPP 60

Query: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120
           SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE
Sbjct: 61  SEHSSPNSTMSFCVTAAGISVFCSGCFLFVVFLIFFVSFKLGKLLLVLVATLAPEGAIFE 120

Query: 121 GKQRNLSKKKKQRGLSEKI 139
           GKQRNLSKKKKQRGLSEKI
Sbjct: 121 GKQRNLSKKKKQRGLSEKI 139

BLAST of MELO3C031079.jh1 vs. ExPASy TrEMBL
Match: A0A7G2EN36 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS11614 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.69e-09
Identity = 37/59 (62.71%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 65
          A  KKSS SGGAKK +  RRN Q    L FFGAGGHV ISGIL   AFGV QPP + S+
Sbjct: 13 ALTKKSSISGGAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPPGDVST 71

BLAST of MELO3C031079.jh1 vs. ExPASy TrEMBL
Match: A0A7J0FBZ7 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_11g0005400 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.82e-07
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 7  ATKKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSSP 66
          A KKKSS SGG K A+G+ R+E     L FFG  GH +ISG L L AFGV QP +  S  
Sbjct: 5  ANKKKSSISGGEKAAIGELRSENLAATLFFFGGSGHDKISGNLNLFAFGVEQPDTS-SLL 64

Query: 67 NSTMSFCVTAAGIS 80
          +S++ F  T +G S
Sbjct: 65 SSSLGFFSTKSGFS 77

BLAST of MELO3C031079.jh1 vs. ExPASy TrEMBL
Match: A0A654F956 (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AN1_LOCUS13521 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.78e-06
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = 0

Query: 18 AKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 65
          AKK +  RRN Q    L FFGAGGHV ISGIL   AFGV QPP + S+
Sbjct: 12 AKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPPGDVST 59

BLAST of MELO3C031079.jh1 vs. TAIR 10
Match: AT3G20900.1 (unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06
Identity = 31/57 (54.39%), Postives = 34/57 (59.65%), Query Frame = 0

Query: 9  KKKSSNSGGAKKAMGDRRNEQSETALGFFGAGGHVRISGILCLSAFGVLQPPSEHSS 66
          K    N   AKK +  RRN Q    L FFGAGGHV ISGIL   AFGV QPP + S+
Sbjct: 3  KVARKNKTSAKKTICLRRNTQFFETLCFFGAGGHVSISGILDFLAFGVQQPPGDVST 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016900741.11.67e-86100.00PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo] >KAA0041417.1 tra... [more]
QHO18661.11.23e-1047.41uncharacterized protein DS421_11g322430 [Arachis hypogaea][more]
CAD5323680.13.50e-0962.71unnamed protein product [Arabidopsis thaliana][more]
QHO48225.14.77e-0857.58uncharacterized protein DS421_1g03730 [Arachis hypogaea][more]
GFY96234.15.83e-0750.00hypothetical protein Acr_11g0005400 [Actinidia rufa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BCF08.11e-87100.00Transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18... [more]
A0A1S4DXN38.11e-87100.00uncharacterized protein LOC107991009 OS=Cucumis melo OX=3656 GN=LOC107991009 PE=... [more]
A0A7G2EN361.69e-0962.71(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC... [more]
A0A7J0FBZ72.82e-0750.00Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_11g0005400 PE=4 SV=1[more]
A0A654F9564.78e-0660.42Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AN1_LOCUS13521 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G20900.11.7e-0654.39unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacter... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031079.jh1.t1MELO3C031079.jh1.t1mRNA