MELO3C031043.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C031043.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Locationchr04: 34178615 .. 34183097 (-)
RNA-Seq ExpressionMELO3C031043.jh1
SyntenyMELO3C031043.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACATTAAAGCAGGTCAACCACTTATCCCGAAAAGTAAGTATCCAGTCCATTATTTTGTACTCTAGCAAACACTTGTCCACGAATTTCGGATAATACCACTCAAGATACTGCTAGGATCCACTCAAAAGTATTTCCACGCAATAACCTTGTGTGATAGAGTTTCAAACTCCCGAGGTAGGCATCGTAACCACTTAGCCAACAACCCCCTGGGACCCACCACACATCTAAGTTGACTAGAGAGACACATTCCTCTTGTCAACTCATCTATGTTATTATTGATCTTTGCTGGAAGATATTTCCTTGGGGTTTTTCTCACCCTATGCTTTAAGTTTATTCTAGAAATATGATTAGGATAATTGGTTATGCTTCCGTAGAGCATGCGTTGAGATCGATATAAAATAAAAGAAATTGGAGAATCATTCAGCGTAGAAAAGACCAACAAACGTTCAATTTAATCTTTATCTTTTCTGACATTAACTTCGTGTAAAAATGGCCTTTAACTTTATGAATGAAAGGAAAGACCCTTGGTTGTGGTTAAGTAAAGGTTGAGTTTGAAGAAAAACAGTGAAGGAAAAGCATGTTTAAAAGTTGAGGTTGAGTTTTAAGATCGGTGGCCAAAGAAAAAGAAGAAGTTCAAATTTTGGCTAAGTCTTGGTTGATGTTAGGCGCTTAAGGAGGGAGTTGACAAGGATTAGGCAGGCAACCTTGCCATGAAAATCTCCAAAGGGAAAGTTACCCAACCAACCATGTTAAGGAAGACCTCTGAGGATTTGAGGCTGGCCGACAAAACCCTAGGCAAGGAGTGACAAGCAAGATAGGTAGCCAAAGGTTTTGGTGTTGTGCGTGGCCAAAAGGTGTCAAGGAAAAACCTCTAAAGACAAAGTCGAGCTTGAGGTAATGTAGTTTGAGAAACAAGCTTGTTGAAGGAAATTTCTTGATTTAAATTTTGAATTTTAAGTTATGAATTCCTAAAGTCAAATCTGGTTTTTCAAAGGAACATCTGACACTTAGGCAAGGGCTGTCAAGGTTGGGCGTTGAGGCTAGGCAGCAAGACAGGGTTGAACAAGATTGGTGTTAAGGCTATCTGAGAGTTCAGCAAGGGCTGTCAAGGTTGGGCGTTGAGGCTAGGCAGCAACAAGACAGGGTTGAACAAGATTGGTGTTAAGGCTATCTGAGAGTTCAGTATGAGTGCGGCTGTTTCAGTGCGCATTGCGCAGGGCTAGGTGGCATGGTGGTGTCATGCATTGGGCACAAGGCAAGCACCTGGAGCGTGTGGCTATGAGGTAAGCCAGCGTTGCCCAGGGCCATGCCATGGCCCGTCTGTGTGCACACGCAGCATGTCCATGACAATGTCATGGCATGGGTTGTGGCTTGTTGCTAAAATTGAACTTGGTTTCTTGATATTTTCTAAGTATGAGGAGATTAATATGAAATATTAATTCCTTTGTTTCAGACCAAGAAGAAGAAAATGGAGTTTTTAAGCCAAGGAGTCGGGCTACAAGTTGCCAGTGACTAAATGCATTTAAATGACTTTCTAAACATGAATTTCTAGCTAAAAGTTTCTAAATACGCTTTGATATTTCTGAATGACGTTCTTGACTGATTTAGTAACAGATTTGCAGAGCATGGGTTTGATAAAGAGTTATGTTAAGCATGTTTTATAAGCTATTTCCAAGCATGTCTTATAAAGCGTGAGATTTGTAAAGTTGAGTCCTAAATGTTTAAGCAACCATGTTTCCAAGCTATTTAGAATGTTTCAAAAAGTAAAGATTTCAAGAACACTTTACATATGTCTATACTCGGTTGATACTCACTGCCTACTCGAGTTATGTGCACTTATGTTCCATACAGATGTGAAGGTAGGCCATAAGACCTATCATTCCGGTACATTAGTGAAGGTACAATTATTGTACTTAAGGGAAGAAGATTACAATTAAATTGCGCCTACTATATTGAGAGTTCATGTCAAATGACAGTGTGGTGACTTGTCACCCAAGTTACGGTTAAGGATAGGTTATACATTGTTGTTTAAAGTTAAAGCTTATGAAATGTATTTAGTTGCTTGCATGATTTCAAAGCTTAAAGCATTGAATGTAACTATTTAGAAAAGCATGTTTACAAAATGGTTACTCACCGAGTTTTTCAACTCATCCTTTCAAAATGTTCTCTCACTTTCCATGTATTGATCACCATGTCGAGCCTACTCTACAGCTTCTATAGGTGAACTGAGGTTATTTTCTTTATAGTTAGCATACGTCTGCATTTAGTATTAGTGTCATGAACCTAGATAGTACAGTTTATATTTTCATTGTGCGTCTGTAATAAAATTAGTTTTAAGTGTAATAAGCATTTAGCTTATGATGGGTTTAATTAGCATGCATTGTTGGTTGTAAGGCAGCTGTGTTAGTTTGCTTGGTTGGTAAGTGTTGTCAAAGTATGGCAATGTTTGCTAGCCCTCGCACCCTCTTTTGAAGCTAGAGAGTGAGGGAGCTTCGGAAGGGGGTGTCACCCGTATAGTAACCATCTACATTAAAGAAATCCAAATTCATATGACAGAATATCATTGCACGCGATCTAACAGTAATTAGAGCACAGATTAGAGGGAAGAACCTGGTATGCCTCATGATTGGATACGATCCTCCTAATAATAGTGGTGGTTGTGATATCTAGCGGGCTGTCTAAAATTTTGAAGATCCCCATATTAATAGGGACAGCATATGGATTGCAGTCCCTCTGTAAAATAACAATGTTGCCTTCAATAGTTATCTGACATCCACCCAATAGCAATAATCCAAAATATTATAAAAATAGAACCCATTCTCCTTGTAGGACAATTATACCTTCTGAAAATCATTAACTTCGGCTACAGTTCCATGGACTACCAATGAAATGTTAAAAGTTGTAATCTGCAGCAAGAGAAAATAAAAATGAAATTAAGCCGACATGAGTGTTCAATACTCCACCATCCAATATCCAGCCATTTATGAAAAATAAACTGCTCAATACCTGTGTTTTACAAACATCTTTCGGGCATTCATTTCCAAATAACGATTATTTCAATACAAGCATCTTTTATCTAACTATTGCCACCACCACTATCTTTAACTCTTTTGCAGATTAAAACACCAAATATATTCAAGATAAAACCAACAATTAAACTGCGTCAAACTGGAAGACAACAAACACAAATAAAACTAACCATATCTTTAGACACTTCCCAAGGTGCACCGATTATCACCTCATCCACATAACGACATGCCAAGACACTCAAACTTCTCTCATGCAGATTCATTATTGGGCGATGAGCTCCTCTGTTGGCACTGTAAGGAAACCACAAAACATGAAAAATAAATTCATCCTTCAAGATAGAAATTATATCTCAAGTTAAAACTTATCAAGGTTCACTTGTCAGATACTTGGTTGGATCTCCGGATGATTATTTAGATGTTCAAGTTGTGGCTTTAACGGATAGAAAGTCAGAAGCCCCTCAATGTTGACATATCTAACAATTCATCTTATTGAGGTGGTGCATTTTTAAAACTTTCAATCTTAGACGGGGAAAGAACAAATTATGTAGTAGGAATAAGGTATTTGTCTTGATTAGAATTTGGATTAGTTTCCACGATGGATTAGAATTAGAATTAGGATTAGTTTTCTCGGTTATTAGGATTACAAAAATGAGAGGTAAGTTTTCTATAAATGATTGTGGTATTGTGCTAGTCTAACTAAGCCATTTTGTTGTTGTCCTTTAGGATTCCTAATCTCCTGGAATACAAGGGGACTGACATATCCTACTAAGCGCATAGCCCTCAAGAAATTCATAAAGAACCATCACTAGGATGTGGTTATGATTCAAGAATCGAAAATGGAAACCTTCGATGCAGTTTTTATTAAGTCAGTATGGAGTTCCAAAGATATTGGATGGGAGTTTATGAAATAATTAGGTGCGCCAGGGGGTATTCTCACGATGTGGAACAACAACAAAATTACAGTGCTTGAGACTATCAAAGAGAGGTTTTCTCTCTCAAGTAGAGGCATTACGATGGGCAATATGTTGTTGGATTACCAATGTATATGGCCCATGTGGTTATAGAGAAAGAAGGCTCGTTTAAATGGAGGGCCTGAGGCTTGGTGTATGGGAGGAGACTTCAACGTTACTCGTTGGGTGCATGAGAGGCTTGTAATTGGCAGAAATACAAGAGGGATGAGAATTTTTAATTTCTTCATTGATTCGGCCAACACCATGGAAATTTCTCTTCAAAACGGCAAATATCATGGTCTAGAGAGGGTGGAGCACCCTCAAGGTCCTTGTTGGAAAGATTTTTTATTAATCACAAATGGGAAGAAAAGTTTGAGAACTCCAGATTGTCCCGTAAAGCTTGCATATTCTTCGGTCACTTTCCTTTACTATTGGCGGTTGGAGAAGTTTTATGGGAGCCTTCTCATTCAAGTTTTGCAATGGCTGGCTGATGGTTAA

mRNA sequence

ATGAATACATTAAAGCAGGTCAACCACTTATCCCGAAAATGCGCATTGCGCAGGGCTAGGTGGCATGGTGGTGTCATGCATTGGGCACAAGGCAAGCACCTGGAGCGTGTGGCTATGAGACGGGGAAAGAACAAATTATGTAGTAGGAATAAGAGAAAGAAGGCTCGTTTAAATGGAGGGCCTGAGGCTTGGTGTATGGGAGGAGACTTCAACGTTACTCGTTGGGTGCATGAGAGGCTTGTAATTGGCAGAAATACAAGAGGGATGAGAATTTTTAATTTCTTCATTGATTCGGCCAACACCATGGAAATTTCTCTTCAAAACGGCAAATATCATGGTCTAGAGAGGGTGGAGCACCCTCAAGGTCCTTGTTGGAAAGATTTTTTATTAATCACAAATGGGAAGAAAAGTTTGAGAACTCCAGATTGTCCCGTAAAGCTTGCATATTCTTCGGTCACTTTCCTTTACTATTGGCGGTTGGAGAAGTTTTATGGGAGCCTTCTCATTCAAGTTTTGCAATGGCTGGCTGATGGTTAA

Coding sequence (CDS)

ATGAATACATTAAAGCAGGTCAACCACTTATCCCGAAAATGCGCATTGCGCAGGGCTAGGTGGCATGGTGGTGTCATGCATTGGGCACAAGGCAAGCACCTGGAGCGTGTGGCTATGAGACGGGGAAAGAACAAATTATGTAGTAGGAATAAGAGAAAGAAGGCTCGTTTAAATGGAGGGCCTGAGGCTTGGTGTATGGGAGGAGACTTCAACGTTACTCGTTGGGTGCATGAGAGGCTTGTAATTGGCAGAAATACAAGAGGGATGAGAATTTTTAATTTCTTCATTGATTCGGCCAACACCATGGAAATTTCTCTTCAAAACGGCAAATATCATGGTCTAGAGAGGGTGGAGCACCCTCAAGGTCCTTGTTGGAAAGATTTTTTATTAATCACAAATGGGAAGAAAAGTTTGAGAACTCCAGATTGTCCCGTAAAGCTTGCATATTCTTCGGTCACTTTCCTTTACTATTGGCGGTTGGAGAAGTTTTATGGGAGCCTTCTCATTCAAGTTTTGCAATGGCTGGCTGATGGTTAA

Protein sequence

MNTLKQVNHLSRKCALRRARWHGGVMHWAQGKHLERVAMRRGKNKLCSRNKRKKARLNGGPEAWCMGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGKYHGLERVEHPQGPCWKDFLLITNGKKSLRTPDCPVKLAYSSVTFLYYWRLEKFYGSLLIQVLQWLADG
Homology
[Close]
BLAST of MELO3C031043.jh1 vs. NCBI nr
Match: KAA0040846.1 (Transposon TX1 uncharacterized [Cucumis melo var. makuwa] >TYK17822.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 1.47e-13
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0 

Query: 62  EAWCMGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGKY 111
           EAWC GGDFN+TRWVHER  +GR TRGMR+FN F++ A  +EI L N ++
Sbjct: 2   EAWCFGGDFNITRWVHERFPLGRTTRGMRLFNNFLEKAKLLEIPLGNDRF 51

[Close]
BLAST of MELO3C031043.jh1 vs. NCBI nr
Match: KAA0063413.1 (hypothetical protein E6C27_scaffold508G00500 [Cucumis melo var. makuwa] >TYK11671.1 hypothetical protein E5676_scaffold828G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 2.15e-08
Identity = 28/41 (68.29%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 69  DFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNG 109
           DFN TRW HER  IGR TRGMR FN FID AN +E+ L NG
Sbjct: 6   DFNTTRWAHERFPIGRATRGMRKFNNFIDKANLLEVPLSNG 46

[Close]
BLAST of MELO3C031043.jh1 vs. NCBI nr
Match: TYK03825.1 (exodeoxyribonuclease-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 3.12e-08
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 66  MGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGKY 111
           + GDFN+TRW HER  +GR+TRGM +FN  I+S   MEI + NG+Y
Sbjct: 262 LSGDFNITRWAHERYPLGRSTRGMELFNKLIESVYLMEIPMLNGRY 307

[Close]
BLAST of MELO3C031043.jh1 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 1.03e-07
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 63  AWCMGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGK 110
           AWC+GG  N+TRW HE   + + TRGMR FN  IDS N  E+ LQNG+
Sbjct: 174 AWCIGGKCNITRWAHECFPLEKQTRGMRQFNNPIDSLNIWELPLQNGR 221

[Close]
BLAST of MELO3C031043.jh1 vs. NCBI nr
Match: KAA0038339.1 (uncharacterized protein E6C27_scaffold270G002130 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 1.68e-06
Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 0 

Query: 66  MGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGKYHGLERVEHPQGPCW 125
           M GDFN+TRW HER   GR T+ +R FN  I  A   E+SL NG++             W
Sbjct: 184 MRGDFNITRWAHERFPCGRTTKCVRKFNNVIHRAKLFEVSLSNGRF------------TW 243

Query: 126 --KDFLLITNGKKSLRTPDCPVKLAYS 150
             +DF+ +    K+    +C +K ++S
Sbjct: 244 SREDFVSVGCSTKNATVIECTLKNSHS 258

[Close]
BLAST of MELO3C031043.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D1U8 (Transposon TX1 uncharacterized OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00730 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.14e-14
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0 

Query: 62  EAWCMGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGKY 111
           EAWC GGDFN+TRWVHER  +GR TRGMR+FN F++ A  +EI L N ++
Sbjct: 2   EAWCFGGDFNITRWVHERFPLGRTTRGMRLFNNFLEKAKLLEIPLGNDRF 51

[Close]
BLAST of MELO3C031043.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CIL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00450 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.04e-08
Identity = 28/41 (68.29%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 69  DFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNG 109
           DFN TRW HER  IGR TRGMR FN FID AN +E+ L NG
Sbjct: 6   DFNTTRWAHERFPIGRATRGMRKFNNFIDKANLLEVPLSNG 46

[Close]
BLAST of MELO3C031043.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BXH7 (Exodeoxyribonuclease-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00160 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.51e-08
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 66  MGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGKY 111
           + GDFN+TRW HER  +GR+TRGM +FN  I+S   MEI + NG+Y
Sbjct: 262 LSGDFNITRWAHERYPLGRSTRGMELFNKLIESVYLMEIPMLNGRY 307

[Close]
BLAST of MELO3C031043.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.99e-08
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 63  AWCMGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGK 110
           AWC+GG  N+TRW HE   + + TRGMR FN  IDS N  E+ LQNG+
Sbjct: 174 AWCIGGKCNITRWAHECFPLEKQTRGMRQFNNPIDSLNIWELPLQNGR 221

[Close]
BLAST of MELO3C031043.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BDI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001240 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.15e-07
Identity = 31/87 (35.63%), Postives = 45/87 (51.72%), Query Frame = 0 

Query: 66  MGGDFNVTRWVHERLVIGRNTRGMRIFNFFIDSANTMEISLQNGKYHGLERVEHPQGPCW 125
           M GDFN+TRW HER   GR T+ +R FN  I  A   E+SL NG++             W
Sbjct: 184 MRGDFNITRWAHERFPCGRTTKCVRKFNNVIHRAKLFEVSLSNGRF------------TW 243

Query: 126 --KDFLLITNGKKSLRTPDCPVKLAYS 150
             +DF+ +    K+    +C +K ++S
Sbjct: 244 SREDFVSVGCSTKNATVIECTLKNSHS 258

The following BLAST results are available for this feature:
BLAST of MELO3C031043.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0040846.11.47e-1362.00Transposon TX1 uncharacterized [Cucumis melo var. makuwa] >TYK17822.1 Transposon... [more]
KAA0063413.12.15e-0868.29hypothetical protein E6C27_scaffold508G00500 [Cucumis melo var. makuwa] >TYK1167... [more]
TYK03825.13.12e-0856.52exodeoxyribonuclease-like [Cucumis melo var. makuwa][more]
TYJ98683.11.03e-0756.25hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa][more]
KAA0038339.11.68e-0635.63uncharacterized protein E6C27_scaffold270G002130 [Cucumis melo var. makuwa][more]
BLAST of MELO3C031043.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C031043.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D1U87.14e-1462.00Transposon TX1 uncharacterized OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3CIL81.04e-0868.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BXH71.51e-0856.52Exodeoxyribonuclease-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5D3BHE34.99e-0856.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BDI98.15e-0735.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C031043.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 20..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031043.jh1.t1MELO3C031043.jh1.t1mRNA